RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 REREQ9P2R6 1566 aa22.11■■□□□ 1.13
NELFA-216ENST00000542778 FAM161AQ3B820 660 aa22.11■■□□□ 1.13
NELFA-216ENST00000542778 C8orf34Q49A92 452 aa22.11■■□□□ 1.13
NELFA-216ENST00000542778 AGLP35573 1532 aa22.1■■□□□ 1.13
NELFA-216ENST00000542778 RRAGDQ9NQL2 400 aaPredicted RBP22.09■■□□□ 1.13
NELFA-216ENST00000542778 CC2D1BQ5T0F9 858 aaKnown RBP22.09■■□□□ 1.13
NELFA-216ENST00000542778 C14orf93Q9H972 538 aaKnown RBP22.09■■□□□ 1.13
NELFA-216ENST00000542778 ERVK-7P63135 1459 aa22.08■■□□□ 1.13
NELFA-216ENST00000542778 GLIPR1L2Q4G1C9 344 aa22.08■■□□□ 1.13
NELFA-216ENST00000542778 TMEM131LA2VDJ0 1609 aa22.08■■□□□ 1.12
NELFA-216ENST00000542778 SLC52A1Q9NWF4 448 aa22.06■■□□□ 1.12
NELFA-216ENST00000542778 ADGRB1O14514 1584 aa22.06■■□□□ 1.12
NELFA-216ENST00000542778 TRHP20396 242 aaPredicted RBP22.06■■□□□ 1.12
NELFA-216ENST00000542778 CENPQQ7L2Z9 268 aaPredicted RBP22.05■■□□□ 1.12
NELFA-216ENST00000542778 RPGRIP1LQ68CZ1 1315 aa22.04■■□□□ 1.12
NELFA-216ENST00000542778 NLRP13Q86W25 1043 aa22.04■■□□□ 1.12
NELFA-216ENST00000542778 EIF3AQ14152 1382 aaKnown RBP22.03■■□□□ 1.12
NELFA-216ENST00000542778 POGKQ9P215 609 aa22.03■■□□□ 1.12
NELFA-216ENST00000542778 MYOM1P52179 1685 aa22.03■■□□□ 1.12
NELFA-216ENST00000542778 C20orf194Q5TEA3 1177 aa22.02■■□□□ 1.12
NELFA-216ENST00000542778 VGFO15240 615 aaPredicted RBP22.01■■□□□ 1.11
NELFA-216ENST00000542778 SETBP1Q9Y6X0 1596 aa22■■□□□ 1.11
NELFA-216ENST00000542778 PARD3Q8TEW0 1356 aa22■■□□□ 1.11
NELFA-216ENST00000542778 SAFB2Q14151 953 aaKnown RBP eCLIP22■■□□□ 1.11
NELFA-216ENST00000542778 STAG3Q9UJ98 1225 aa22■■□□□ 1.11
NELFA-216ENST00000542778 STK26Q9P289 416 aa21.99■■□□□ 1.11
NELFA-216ENST00000542778 CENPJQ9HC77 1338 aaPredicted RBP21.98■■□□□ 1.11
NELFA-216ENST00000542778 ZMYM3Q14202 1370 aa21.98■■□□□ 1.11
NELFA-216ENST00000542778 BLMP54132 1417 aaPredicted RBP21.98■■□□□ 1.11
NELFA-216ENST00000542778 L1TD1Q5T7N2 865 aaKnown RBP21.97■■□□□ 1.11
NELFA-216ENST00000542778 PLPPR3Q6T4P5 718 aa21.97■■□□□ 1.11
NELFA-216ENST00000542778 ASXL1Q8IXJ9 1541 aa21.97■■□□□ 1.11
NELFA-216ENST00000542778 KDM5AP29375 1690 aaKnown RBP21.96■■□□□ 1.11
NELFA-216ENST00000542778 ZMYND15Q9H091 742 aa21.96■■□□□ 1.11
NELFA-216ENST00000542778 MYO3AQ8NEV4 1616 aa21.96■■□□□ 1.11
NELFA-216ENST00000542778 QRICH2Q9H0J4 1663 aa21.96■■□□□ 1.11
NELFA-216ENST00000542778 SPATA31D1Q6ZQQ2 1576 aa21.96■■□□□ 1.11
NELFA-216ENST00000542778 INSRP06213 1382 aa21.95■■□□□ 1.11
NELFA-216ENST00000542778 VSIG10Q8N0Z9 540 aa21.95■■□□□ 1.1
NELFA-216ENST00000542778 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.1
NELFA-216ENST00000542778 VIRMAQ69YN4 1812 aaKnown RBP21.95■■□□□ 1.1
NELFA-216ENST00000542778 PPP6R1Q9UPN7 881 aa21.95■■□□□ 1.1
NELFA-216ENST00000542778 CEBPAP49715 358 aaPredicted RBP21.94■■□□□ 1.1
NELFA-216ENST00000542778 A2ML1A8K2U0 1454 aa21.93■■□□□ 1.1
NELFA-216ENST00000542778 ARHGEF28Q8N1W1 1705 aaKnown RBP21.92■■□□□ 1.1
NELFA-216ENST00000542778 AMER1Q5JTC6 1135 aaPredicted RBP21.91■■□□□ 1.1
NELFA-216ENST00000542778 CARD14Q9BXL6 1004 aa21.91■■□□□ 1.1
NELFA-216ENST00000542778 RGS3P49796 1198 aa21.9■■□□□ 1.1
NELFA-216ENST00000542778 CDCA8Q53HL2 280 aa21.9■■□□□ 1.1
NELFA-216ENST00000542778 KNSTRNQ9Y448 316 aa21.9■■□□□ 1.1
NELFA-216ENST00000542778 ZFYVE9O95405 1425 aa21.89■■□□□ 1.09
NELFA-216ENST00000542778 NAP1L5Q96NT1 182 aaPredicted RBP21.89■■□□□ 1.09
NELFA-216ENST00000542778 USP19O94966 1318 aa21.89■■□□□ 1.09
NELFA-216ENST00000542778 SLC12A5Q9H2X9 1139 aa21.88■■□□□ 1.09
NELFA-216ENST00000542778 RRP9O43818 475 aaKnown RBP21.87■■□□□ 1.09
NELFA-216ENST00000542778 HSP90AA2PQ14568 343 aaPredicted RBP21.87■■□□□ 1.09
NELFA-216ENST00000542778 PNNQ9H307 717 aaKnown RBP21.86■■□□□ 1.09
NELFA-216ENST00000542778 ALKQ9UM73 1620 aa21.86■■□□□ 1.09
NELFA-216ENST00000542778 SBNO2Q9Y2G9 1366 aa21.86■■□□□ 1.09
NELFA-216ENST00000542778 RIMS2Q9UQ26 1411 aa21.86■■□□□ 1.09
NELFA-216ENST00000542778 CLCN1P35523 988 aa21.85■■□□□ 1.09
NELFA-216ENST00000542778 CABP2Q9NPB3 220 aa21.85■■□□□ 1.09
NELFA-216ENST00000542778 TULP4Q9NRJ4 1543 aa21.85■■□□□ 1.09
NELFA-216ENST00000542778 HSP90AA1P07900 732 aaKnown RBP21.84■■□□□ 1.09
NELFA-216ENST00000542778 PTPRMP28827 1452 aa21.83■■□□□ 1.09
NELFA-216ENST00000542778 DNAJC5Q9H3Z4 198 aa21.83■■□□□ 1.09
NELFA-216ENST00000542778 PRAM1Q96QH2 718 aa21.83■■□□□ 1.08
NELFA-216ENST00000542778 XRCC6P12956 609 aaKnown RBP eCLIP21.82■■□□□ 1.08
NELFA-216ENST00000542778 MINK1Q8N4C8 1332 aaPredicted RBP21.82■■□□□ 1.08
NELFA-216ENST00000542778 YTHDC2Q9H6S0 1430 aaKnown RBP21.82■■□□□ 1.08
NELFA-216ENST00000542778 BECN1Q14457 450 aa21.81■■□□□ 1.08
NELFA-216ENST00000542778 SLKQ9H2G2 1235 aaPredicted RBP21.81■■□□□ 1.08
NELFA-216ENST00000542778 TNRQ92752 1358 aa21.81■■□□□ 1.08
NELFA-216ENST00000542778 PPP2R1AP30153 589 aa21.81■■□□□ 1.08
NELFA-216ENST00000542778 DUSP27Q5VZP5 1158 aa21.79■■□□□ 1.08
NELFA-216ENST00000542778 WAPLQ7Z5K2 1190 aa21.79■■□□□ 1.08
NELFA-216ENST00000542778 ANTXR1Q9H6X2 564 aa21.79■■□□□ 1.08
NELFA-216ENST00000542778 FSD2A1L4K1 749 aa21.79■■□□□ 1.08
NELFA-216ENST00000542778 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.78■■□□□ 1.08
NELFA-216ENST00000542778 GOLGA6L3A6NEY3 463 aa21.77■■□□□ 1.08
NELFA-216ENST00000542778 NRXN3Q9Y4C0 1643 aa21.77■■□□□ 1.08
NELFA-216ENST00000542778 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.08
NELFA-216ENST00000542778 PLEKHH1Q9ULM0 1364 aa21.76■■□□□ 1.07
NELFA-216ENST00000542778 NLRP1Q9C000 1473 aa21.76■■□□□ 1.07
NELFA-216ENST00000542778 SEC24BO95487 1268 aa21.75■■□□□ 1.07
NELFA-216ENST00000542778 NSD3Q9BZ95 1437 aa21.75■■□□□ 1.07
NELFA-216ENST00000542778 ARXQ96QS3 562 aa21.75■■□□□ 1.07
NELFA-216ENST00000542778 METP08581 1390 aa21.75■■□□□ 1.07
NELFA-216ENST00000542778 EVC2Q86UK5 1308 aa21.75■■□□□ 1.07
NELFA-216ENST00000542778 UBR1Q8IWV7 1749 aa21.75■■□□□ 1.07
NELFA-216ENST00000542778 PANK2Q9BZ23 570 aa21.74■■□□□ 1.07
NELFA-216ENST00000542778 TNNT2P45379 298 aaPredicted RBP21.74■■□□□ 1.07
NELFA-216ENST00000542778 C3P01024 1663 aa21.74■■□□□ 1.07
NELFA-216ENST00000542778 SRPK2P78362 688 aaKnown RBP21.73■■□□□ 1.07
NELFA-216ENST00000542778 SLC24A1O60721 1099 aa21.73■■□□□ 1.07
NELFA-216ENST00000542778 FER1L4A9Z1Z3 1794 aa21.71■■□□□ 1.07
NELFA-216ENST00000542778 LTKP29376 864 aa21.71■■□□□ 1.07
NELFA-216ENST00000542778 ADAMTS8Q9UP79 889 aa21.71■■□□□ 1.07
NELFA-216ENST00000542778 ZNF521Q96K83 1311 aa21.7■■□□□ 1.06
NELFA-216ENST00000542778 TXNDC2Q86VQ3 553 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms