RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 RSPH6AQ9H0K4 717 aa6.81□□□□□ -1.32
PROM1-220ENST00000540805 PDE3BQ13370 1112 aa6.8□□□□□ -1.32
PROM1-220ENST00000540805 NAP1L5Q96NT1 182 aaPredicted RBP6.8□□□□□ -1.32
PROM1-220ENST00000540805 DISP3Q9P2K9 1392 aa6.8□□□□□ -1.32
PROM1-220ENST00000540805 PREX1Q8TCU6 1659 aa6.8□□□□□ -1.32
PROM1-220ENST00000540805 RALBP1Q15311 655 aa6.8□□□□□ -1.32
PROM1-220ENST00000540805 IQSEC2Q5JU85 1478 aa6.8□□□□□ -1.32
PROM1-220ENST00000540805 SETBP1Q9Y6X0 1596 aa6.79□□□□□ -1.32
PROM1-220ENST00000540805 NEXMIFQ5QGS0 1516 aa6.79□□□□□ -1.32
PROM1-220ENST00000540805 ST20-MTHFSA0A0A6YYL1 179 aa6.79□□□□□ -1.32
PROM1-220ENST00000540805 TMEM131LA2VDJ0 1609 aa6.79□□□□□ -1.32
PROM1-220ENST00000540805 GGT6Q6P531 493 aa6.79□□□□□ -1.32
PROM1-220ENST00000540805 ARID3AQ99856 593 aa6.79□□□□□ -1.32
PROM1-220ENST00000540805 SETD1AO15047 1707 aaKnown RBP6.78□□□□□ -1.32
PROM1-220ENST00000540805 PER1O15534 1290 aaPredicted RBP6.78□□□□□ -1.32
PROM1-220ENST00000540805 SAFB2Q14151 953 aaKnown RBP eCLIP6.78□□□□□ -1.32
PROM1-220ENST00000540805 PTPRMP28827 1452 aa6.78□□□□□ -1.32
PROM1-220ENST00000540805 ARHGAP31Q2M1Z3 1444 aa6.78□□□□□ -1.32
PROM1-220ENST00000540805 CFAP65Q6ZU64 1925 aaKnown RBP6.78□□□□□ -1.32
PROM1-220ENST00000540805 HSP90AA2PQ14568 343 aaPredicted RBP6.78□□□□□ -1.32
PROM1-220ENST00000540805 RAPGEF3O95398 923 aa6.78□□□□□ -1.32
PROM1-220ENST00000540805 TNNT2P45379 298 aaPredicted RBP6.77□□□□□ -1.33
PROM1-220ENST00000540805 RGS3P49796 1198 aa6.77□□□□□ -1.33
PROM1-220ENST00000540805 PIK3C2GO75747 1445 aa6.77□□□□□ -1.33
PROM1-220ENST00000540805 ASXL1Q8IXJ9 1541 aa6.77□□□□□ -1.33
PROM1-220ENST00000540805 KIF3BO15066 747 aa6.77□□□□□ -1.33
PROM1-220ENST00000540805 CRBNQ96SW2 442 aa6.77□□□□□ -1.33
PROM1-220ENST00000540805 CARD11Q9BXL7 1154 aa6.77□□□□□ -1.33
PROM1-220ENST00000540805 POGKQ9P215 609 aa6.77□□□□□ -1.33
PROM1-220ENST00000540805 ARHGEF28Q8N1W1 1705 aaKnown RBP6.76□□□□□ -1.33
PROM1-220ENST00000540805 NEUROD2Q15784 382 aa6.76□□□□□ -1.33
PROM1-220ENST00000540805 NLRP13Q86W25 1043 aa6.76□□□□□ -1.33
PROM1-220ENST00000540805 AGLP35573 1532 aa6.76□□□□□ -1.33
PROM1-220ENST00000540805 STRCQ7RTU9 1775 aa6.76□□□□□ -1.33
PROM1-220ENST00000540805 PLIN1O60240 522 aa6.75□□□□□ -1.33
PROM1-220ENST00000540805 GLIPR1L2Q4G1C9 344 aa6.75□□□□□ -1.33
PROM1-220ENST00000540805 ERVK-7P63135 1459 aa6.75□□□□□ -1.33
PROM1-220ENST00000540805 SCAF11Q99590 1463 aaKnown RBP6.75□□□□□ -1.33
PROM1-220ENST00000540805 PARD3Q8TEW0 1356 aa6.75□□□□□ -1.33
PROM1-220ENST00000540805 WDR43Q15061 677 aaKnown RBP eCLIP6.75□□□□□ -1.33
PROM1-220ENST00000540805 FAM43AQ8N2R8 423 aa6.75□□□□□ -1.33
PROM1-220ENST00000540805 ADGRF5Q8IZF2 1346 aa6.75□□□□□ -1.33
PROM1-220ENST00000540805 QRICH2Q9H0J4 1663 aa6.75□□□□□ -1.33
PROM1-220ENST00000540805 CDCA7LQ96GN5 454 aa6.74□□□□□ -1.33
PROM1-220ENST00000540805 ARHGEF40Q8TER5 1519 aa6.74□□□□□ -1.33
PROM1-220ENST00000540805 CLTCQ00610 1675 aaKnown RBP6.74□□□□□ -1.33
PROM1-220ENST00000540805 AAMPQ13685 434 aa6.74□□□□□ -1.33
PROM1-220ENST00000540805 BCL11BQ9C0K0 894 aaPredicted RBP6.74□□□□□ -1.33
PROM1-220ENST00000540805 FAM161AQ3B820 660 aa6.74□□□□□ -1.33
PROM1-220ENST00000540805 CENPQQ7L2Z9 268 aaPredicted RBP6.73□□□□□ -1.33
PROM1-220ENST00000540805 PANK2Q9BZ23 570 aa6.73□□□□□ -1.33
PROM1-220ENST00000540805 KDM5AP29375 1690 aaKnown RBP6.73□□□□□ -1.33
PROM1-220ENST00000540805 NRXN3Q9Y4C0 1643 aa6.73□□□□□ -1.33
PROM1-220ENST00000540805 KDM2BQ8NHM5 1336 aa6.73□□□□□ -1.33
PROM1-220ENST00000540805 INSRP06213 1382 aa6.73□□□□□ -1.33
PROM1-220ENST00000540805 KANK1Q14678 1352 aa6.73□□□□□ -1.33
PROM1-220ENST00000540805 BLMP54132 1417 aaPredicted RBP6.73□□□□□ -1.33
PROM1-220ENST00000540805 FGD1P98174 961 aa6.72□□□□□ -1.33
PROM1-220ENST00000540805 STK26Q9P289 416 aa6.72□□□□□ -1.33
PROM1-220ENST00000540805 GZF1Q9H116 711 aaPredicted RBP6.71□□□□□ -1.33
PROM1-220ENST00000540805 C8orf34Q49A92 452 aa6.71□□□□□ -1.34
PROM1-220ENST00000540805 HSP90AA1P07900 732 aaKnown RBP6.71□□□□□ -1.34
PROM1-220ENST00000540805 ZFYVE9O95405 1425 aa6.71□□□□□ -1.34
PROM1-220ENST00000540805 STAC3Q96MF2 364 aa6.7□□□□□ -1.34
PROM1-220ENST00000540805 LTBP4Q8N2S1 1624 aa6.7□□□□□ -1.34
PROM1-220ENST00000540805 TULP4Q9NRJ4 1543 aa6.7□□□□□ -1.34
PROM1-220ENST00000540805 C20orf194Q5TEA3 1177 aa6.7□□□□□ -1.34
PROM1-220ENST00000540805 USP32Q8NFA0 1604 aa6.7□□□□□ -1.34
PROM1-220ENST00000540805 SBNO2Q9Y2G9 1366 aa6.7□□□□□ -1.34
PROM1-220ENST00000540805 PDE4CQ08493 712 aa6.7□□□□□ -1.34
PROM1-220ENST00000540805 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.7□□□□□ -1.34
PROM1-220ENST00000540805 SHPRHQ149N8 1683 aa6.7□□□□□ -1.34
PROM1-220ENST00000540805 RIMS1Q86UR5 1692 aaKnown RBP6.69□□□□□ -1.34
PROM1-220ENST00000540805 NUTM2FA1L443 756 aa6.69□□□□□ -1.34
PROM1-220ENST00000540805 NPHP1O15259 732 aa6.69□□□□□ -1.34
PROM1-220ENST00000540805 CFAP70Q5T0N1 1121 aa6.69□□□□□ -1.34
PROM1-220ENST00000540805 NUTM2DQ5VT03 806 aaPredicted RBP6.69□□□□□ -1.34
PROM1-220ENST00000540805 CC2D1BQ5T0F9 858 aaKnown RBP6.69□□□□□ -1.34
PROM1-220ENST00000540805 VIRMAQ69YN4 1812 aaKnown RBP6.68□□□□□ -1.34
PROM1-220ENST00000540805 PNNQ9H307 717 aaKnown RBP6.68□□□□□ -1.34
PROM1-220ENST00000540805 L1TD1Q5T7N2 865 aaKnown RBP6.68□□□□□ -1.34
PROM1-220ENST00000540805 SPRYD3Q8NCJ5 442 aa6.68□□□□□ -1.34
PROM1-220ENST00000540805 SLKQ9H2G2 1235 aaPredicted RBP6.68□□□□□ -1.34
PROM1-220ENST00000540805 AMER1Q5JTC6 1135 aaPredicted RBP6.68□□□□□ -1.34
PROM1-220ENST00000540805 C14orf93Q9H972 538 aaKnown RBP6.68□□□□□ -1.34
PROM1-220ENST00000540805 PRDM4Q9UKN5 801 aa6.68□□□□□ -1.34
PROM1-220ENST00000540805 ZHX1Q9UKY1 873 aaPredicted RBP6.68□□□□□ -1.34
PROM1-220ENST00000540805 PRDM10Q9NQV6 1147 aa6.67□□□□□ -1.34
PROM1-220ENST00000540805 TAOK2Q9UL54 1235 aa6.67□□□□□ -1.34
PROM1-220ENST00000540805 UBR1Q8IWV7 1749 aa6.67□□□□□ -1.34
PROM1-220ENST00000540805 CERKQ8TCT0 537 aa6.67□□□□□ -1.34
PROM1-220ENST00000540805 ALKQ9UM73 1620 aa6.67□□□□□ -1.34
PROM1-220ENST00000540805 U2SURPO15042 1029 aaKnown RBP6.67□□□□□ -1.34
PROM1-220ENST00000540805 ERBB4Q15303 1308 aa6.66□□□□□ -1.34
PROM1-220ENST00000540805 A2ML1A8K2U0 1454 aa6.66□□□□□ -1.34
PROM1-220ENST00000540805 IDI1Q13907 227 aa6.66□□□□□ -1.34
PROM1-220ENST00000540805 BECN1Q14457 450 aa6.66□□□□□ -1.34
PROM1-220ENST00000540805 KNSTRNQ9Y448 316 aa6.66□□□□□ -1.34
PROM1-220ENST00000540805 CD163L1Q9NR16 1453 aa6.66□□□□□ -1.34
PROM1-220ENST00000540805 FER1L4A9Z1Z3 1794 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms