RNA–Protein interactions for RNA: ENST00000540585.1

NHLRC4-202, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC4, Length 2,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-202ENST00000540585 TMC1Q8TDI8 760 aa29.57■■■□□ 2.32
NHLRC4-202ENST00000540585 ADGRB1O14514 1584 aa29.54■■■□□ 2.32
NHLRC4-202ENST00000540585 MYOM1P52179 1685 aa29.54■■■□□ 2.32
NHLRC4-202ENST00000540585 PNISRQ8TF01 805 aaKnown RBP29.53■■■□□ 2.32
NHLRC4-202ENST00000540585 SLC26A8Q96RN1 970 aa29.52■■■□□ 2.32
NHLRC4-202ENST00000540585 SLC24A1O60721 1099 aa29.52■■■□□ 2.32
NHLRC4-202ENST00000540585 ASXL1Q8IXJ9 1541 aa29.51■■■□□ 2.32
NHLRC4-202ENST00000540585 DIP2AQ14689 1571 aa29.51■■■□□ 2.31
NHLRC4-202ENST00000540585 NLRP13Q86W25 1043 aa29.49■■■□□ 2.31
NHLRC4-202ENST00000540585 SBNO2Q9Y2G9 1366 aa29.49■■■□□ 2.31
NHLRC4-202ENST00000540585 TBX22Q9Y458 520 aa29.48■■■□□ 2.31
NHLRC4-202ENST00000540585 METP08581 1390 aa29.47■■■□□ 2.31
NHLRC4-202ENST00000540585 CC2D1BQ5T0F9 858 aaKnown RBP29.47■■■□□ 2.31
NHLRC4-202ENST00000540585 TMEM132EQ6IEE7 984 aa29.47■■■□□ 2.31
NHLRC4-202ENST00000540585 LRPPRCP42704 1394 aaKnown RBP29.46■■■□□ 2.31
NHLRC4-202ENST00000540585 CENPJQ9HC77 1338 aaPredicted RBP29.44■■■□□ 2.3
NHLRC4-202ENST00000540585 QRICH2Q9H0J4 1663 aa29.42■■■□□ 2.3
NHLRC4-202ENST00000540585 KNSTRNQ9Y448 316 aa29.41■■■□□ 2.3
NHLRC4-202ENST00000540585 TRAK1Q9UPV9 953 aa29.4■■■□□ 2.3
NHLRC4-202ENST00000540585 PTPRUQ92729 1446 aa29.39■■■□□ 2.29
NHLRC4-202ENST00000540585 YTHDC2Q9H6S0 1430 aaKnown RBP29.39■■■□□ 2.29
NHLRC4-202ENST00000540585 PIK3R4Q99570 1358 aa29.37■■■□□ 2.29
NHLRC4-202ENST00000540585 CHD2O14647 1828 aaKnown RBP29.36■■■□□ 2.29
NHLRC4-202ENST00000540585 AMER1Q5JTC6 1135 aaPredicted RBP29.35■■■□□ 2.29
NHLRC4-202ENST00000540585 ARHGEF28Q8N1W1 1705 aaKnown RBP29.35■■■□□ 2.29
NHLRC4-202ENST00000540585 STK26Q9P289 416 aa29.35■■■□□ 2.29
NHLRC4-202ENST00000540585 DMRT2Q9Y5R5 561 aa29.34■■■□□ 2.29
NHLRC4-202ENST00000540585 XRN1Q8IZH2 1706 aaKnown RBP29.33■■■□□ 2.29
NHLRC4-202ENST00000540585 ERICH6BQ5W0A0 696 aa29.33■■■□□ 2.29
NHLRC4-202ENST00000540585 KNDC1Q76NI1 1749 aa29.33■■■□□ 2.29
NHLRC4-202ENST00000540585 NPC1L1Q9UHC9 1359 aa29.32■■■□□ 2.28
NHLRC4-202ENST00000540585 ABCC11Q96J66 1382 aa29.3■■■□□ 2.28
NHLRC4-202ENST00000540585 ERICH6Q7L0X2 663 aa29.3■■■□□ 2.28
NHLRC4-202ENST00000540585 AMOTL2Q9Y2J4 779 aa29.3■■■□□ 2.28
NHLRC4-202ENST00000540585 NWD1Q149M9 1564 aa29.29■■■□□ 2.28
NHLRC4-202ENST00000540585 TECPR2O15040 1411 aa29.29■■■□□ 2.28
NHLRC4-202ENST00000540585 SMG6Q86US8 1419 aaKnown RBP29.28■■■□□ 2.28
NHLRC4-202ENST00000540585 STRCP1A6NGW2 1772 aa29.28■■■□□ 2.28
NHLRC4-202ENST00000540585 CPS1P31327 1500 aa29.28■■■□□ 2.28
NHLRC4-202ENST00000540585 DLC1Q96QB1 1528 aa29.27■■■□□ 2.28
NHLRC4-202ENST00000540585 KCNA6P17658 529 aa29.25■■■□□ 2.27
NHLRC4-202ENST00000540585 INSRP06213 1382 aa29.25■■■□□ 2.27
NHLRC4-202ENST00000540585 ROBO2Q9HCK4 1378 aa29.24■■■□□ 2.27
NHLRC4-202ENST00000540585 PPP2R1AP30153 589 aa29.23■■■□□ 2.27
NHLRC4-202ENST00000540585 PTCH1Q13635 1447 aa29.22■■■□□ 2.27
NHLRC4-202ENST00000540585 TULP4Q9NRJ4 1543 aa29.21■■■□□ 2.27
NHLRC4-202ENST00000540585 ZNF335Q9H4Z2 1342 aaPredicted RBP29.21■■■□□ 2.27
NHLRC4-202ENST00000540585 PRAM1Q96QH2 718 aa29.2■■■□□ 2.26
NHLRC4-202ENST00000540585 CARD14Q9BXL6 1004 aa29.2■■■□□ 2.26
NHLRC4-202ENST00000540585 BLMP54132 1417 aaPredicted RBP29.2■■■□□ 2.26
NHLRC4-202ENST00000540585 FAM135BQ49AJ0 1406 aa29.2■■■□□ 2.26
NHLRC4-202ENST00000540585 PLEKHH1Q9ULM0 1364 aa29.2■■■□□ 2.26
NHLRC4-202ENST00000540585 SIRT1Q96EB6 747 aa29.19■■■□□ 2.26
NHLRC4-202ENST00000540585 NUDCQ9Y266 331 aa29.19■■■□□ 2.26
NHLRC4-202ENST00000540585 WAPLQ7Z5K2 1190 aa29.19■■■□□ 2.26
NHLRC4-202ENST00000540585 NKTRP30414 1462 aaKnown RBP29.18■■■□□ 2.26
NHLRC4-202ENST00000540585 SENP3-EIF4A1A0A087X0R7 540 aa29.18■■■□□ 2.26
NHLRC4-202ENST00000540585 EVC2Q86UK5 1308 aa29.17■■■□□ 2.26
NHLRC4-202ENST00000540585 PUS7Q96PZ0 661 aaKnown RBP29.16■■■□□ 2.26
NHLRC4-202ENST00000540585 PRKCSHP14314 528 aaPredicted RBP29.15■■■□□ 2.26
NHLRC4-202ENST00000540585 SAFB2Q14151 953 aaKnown RBP eCLIP29.15■■■□□ 2.26
NHLRC4-202ENST00000540585 POGKQ9P215 609 aa29.15■■■□□ 2.26
NHLRC4-202ENST00000540585 NSD3Q9BZ95 1437 aa29.12■■■□□ 2.25
NHLRC4-202ENST00000540585 IRX6P78412 446 aaPredicted RBP29.12■■■□□ 2.25
NHLRC4-202ENST00000540585 DEKP35659 375 aaKnown RBP29.11■■■□□ 2.25
NHLRC4-202ENST00000540585 SLC12A5Q9H2X9 1139 aa29.11■■■□□ 2.25
NHLRC4-202ENST00000540585 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.11■■■□□ 2.25
NHLRC4-202ENST00000540585 USP32Q8NFA0 1604 aa29.11■■■□□ 2.25
NHLRC4-202ENST00000540585 PROSER2Q86WR7 435 aaPredicted RBP29.09■■■□□ 2.25
NHLRC4-202ENST00000540585 RBM33Q96EV2 1170 aaKnown RBP29.09■■■□□ 2.25
NHLRC4-202ENST00000540585 PPP4R2Q9NY27 417 aa29.09■■■□□ 2.25
NHLRC4-202ENST00000540585 LTBP4Q8N2S1 1624 aa29.07■■■□□ 2.24
NHLRC4-202ENST00000540585 LRRC7Q96NW7 1537 aa29.06■■■□□ 2.24
NHLRC4-202ENST00000540585 MINK1Q8N4C8 1332 aaPredicted RBP29.06■■■□□ 2.24
NHLRC4-202ENST00000540585 XIRP1Q702N8 1843 aaKnown RBP29.06■■■□□ 2.24
NHLRC4-202ENST00000540585 NALCNQ8IZF0 1738 aa29.06■■■□□ 2.24
NHLRC4-202ENST00000540585 WDR43Q15061 677 aaKnown RBP eCLIP29.05■■■□□ 2.24
NHLRC4-202ENST00000540585 TMEM94Q12767 1356 aa29.04■■■□□ 2.24
NHLRC4-202ENST00000540585 ADAMTS8Q9UP79 889 aa29.04■■■□□ 2.24
NHLRC4-202ENST00000540585 CABP2Q9NPB3 220 aa29.03■■■□□ 2.24
NHLRC4-202ENST00000540585 ANKRD36BQ8N2N9 1353 aa29.03■■■□□ 2.24
NHLRC4-202ENST00000540585 ADGRB2O60241 1585 aa29.02■■■□□ 2.24
NHLRC4-202ENST00000540585 PDE3BQ13370 1112 aa29.02■■■□□ 2.24
NHLRC4-202ENST00000540585 NINLQ9Y2I6 1382 aa29.02■■■□□ 2.24
NHLRC4-202ENST00000540585 SALL2Q9Y467 1007 aaPredicted RBP29.01■■■□□ 2.24
NHLRC4-202ENST00000540585 ADGRL3Q9HAR2 1447 aa29■■■□□ 2.23
NHLRC4-202ENST00000540585 NCOA3Q9Y6Q9 1424 aa28.98■■■□□ 2.23
NHLRC4-202ENST00000540585 RNF123Q5XPI4 1314 aa28.98■■■□□ 2.23
NHLRC4-202ENST00000540585 CGNL1Q0VF96 1302 aa28.98■■■□□ 2.23
NHLRC4-202ENST00000540585 SRPK2P78362 688 aaKnown RBP28.98■■■□□ 2.23
NHLRC4-202ENST00000540585 ATAD2Q6PL18 1390 aa28.97■■■□□ 2.23
NHLRC4-202ENST00000540585 C14orf37Q86TY3 774 aa28.96■■■□□ 2.23
NHLRC4-202ENST00000540585 MORC1Q86VD1 984 aa28.95■■■□□ 2.23
NHLRC4-202ENST00000540585 CDC42BPGQ6DT37 1551 aa28.94■■■□□ 2.22
NHLRC4-202ENST00000540585 NSD2O96028 1365 aa28.94■■■□□ 2.22
NHLRC4-202ENST00000540585 WASLO00401 505 aaPredicted RBP28.92■■■□□ 2.22
NHLRC4-202ENST00000540585 POLR3AO14802 1390 aaPredicted RBP28.92■■■□□ 2.22
NHLRC4-202ENST00000540585 A0A1W2PP64 1363 aa28.92■■■□□ 2.22
NHLRC4-202ENST00000540585 CDK19Q9BWU1 502 aa28.91■■■□□ 2.22
NHLRC4-202ENST00000540585 C19orf44Q9H6X5 657 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms