RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 SLC52A1Q9NWF4 448 aa9.48□□□□□ -0.89
SNHG1-212ENST00000539975 TNRQ92752 1358 aa9.48□□□□□ -0.89
SNHG1-212ENST00000539975 ARHGAP31Q2M1Z3 1444 aa9.48□□□□□ -0.89
SNHG1-212ENST00000539975 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
SNHG1-212ENST00000539975 PZPP20742 1482 aa9.47□□□□□ -0.89
SNHG1-212ENST00000539975 HDGFP51858 240 aaKnown RBP9.47□□□□□ -0.89
SNHG1-212ENST00000539975 THEMISQ8N1K5 641 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-212ENST00000539975 SLAIN1Q8ND83 568 aa9.47□□□□□ -0.89
SNHG1-212ENST00000539975 MPHOSPH9Q99550 1183 aa9.47□□□□□ -0.89
SNHG1-212ENST00000539975 CLTCQ00610 1675 aaKnown RBP9.47□□□□□ -0.89
SNHG1-212ENST00000539975 ZC3H13Q5T200 1668 aaKnown RBP9.47□□□□□ -0.89
SNHG1-212ENST00000539975 RPRD2Q5VT52 1461 aaKnown RBP9.46□□□□□ -0.9
SNHG1-212ENST00000539975 LMTK2Q8IWU2 1503 aa9.46□□□□□ -0.9
SNHG1-212ENST00000539975 MROH2AA6NES4 1674 aa9.45□□□□□ -0.9
SNHG1-212ENST00000539975 GCC2Q8IWJ2 1684 aa9.45□□□□□ -0.9
SNHG1-212ENST00000539975 PPP1R37O75864 691 aa9.45□□□□□ -0.9
SNHG1-212ENST00000539975 SPRYD3Q8NCJ5 442 aa9.45□□□□□ -0.9
SNHG1-212ENST00000539975 DEPDC5O75140 1603 aa9.45□□□□□ -0.9
SNHG1-212ENST00000539975 UNC13BO14795 1591 aa9.44□□□□□ -0.9
SNHG1-212ENST00000539975 MROH1Q8NDA8 1641 aa9.43□□□□□ -0.9
SNHG1-212ENST00000539975 EID1Q9Y6B2 187 aa9.43□□□□□ -0.9
SNHG1-212ENST00000539975 CAMSAP1Q5T5Y3 1602 aa9.42□□□□□ -0.9
SNHG1-212ENST00000539975 EFCAB6Q5THR3 1501 aa9.42□□□□□ -0.9
SNHG1-212ENST00000539975 NLRP1Q9C000 1473 aa9.42□□□□□ -0.9
SNHG1-212ENST00000539975 IDI1Q13907 227 aa9.42□□□□□ -0.9
SNHG1-212ENST00000539975 BCANQ96GW7 911 aa9.42□□□□□ -0.9
SNHG1-212ENST00000539975 C3P01024 1663 aa9.42□□□□□ -0.9
SNHG1-212ENST00000539975 IQGAP3Q86VI3 1631 aa9.42□□□□□ -0.9
SNHG1-212ENST00000539975 VWDEQ8N2E2 1590 aa9.41□□□□□ -0.9
SNHG1-212ENST00000539975 ERVK-7P63135 1459 aa9.41□□□□□ -0.9
SNHG1-212ENST00000539975 HSPA2P54652 639 aa9.41□□□□□ -0.9
SNHG1-212ENST00000539975 ZNF326Q5BKZ1 582 aaKnown RBP9.41□□□□□ -0.9
SNHG1-212ENST00000539975 ANKLE2Q86XL3 938 aa9.41□□□□□ -0.9
SNHG1-212ENST00000539975 TET3O43151 1660 aa9.4□□□□□ -0.9
SNHG1-212ENST00000539975 SNPHO15079 494 aa9.4□□□□□ -0.9
SNHG1-212ENST00000539975 PPP1R15AO75807 674 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-212ENST00000539975 A2ML1A8K2U0 1454 aa9.4□□□□□ -0.91
SNHG1-212ENST00000539975 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
SNHG1-212ENST00000539975 CEP152O94986 1710 aa9.39□□□□□ -0.91
SNHG1-212ENST00000539975 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.39□□□□□ -0.916e-32■□□□□ 8.9
SNHG1-212ENST00000539975 NOS1P29475 1434 aa9.39□□□□□ -0.91
SNHG1-212ENST00000539975 SPATA31D1Q6ZQQ2 1576 aa9.38□□□□□ -0.91
SNHG1-212ENST00000539975 TXNDC2Q86VQ3 553 aa9.38□□□□□ -0.91
SNHG1-212ENST00000539975 UGGT1Q9NYU2 1555 aa9.37□□□□□ -0.91
SNHG1-212ENST00000539975 PREX1Q8TCU6 1659 aa9.37□□□□□ -0.91
SNHG1-212ENST00000539975 LMTK3Q96Q04 1460 aa9.36□□□□□ -0.91
SNHG1-212ENST00000539975 PAXIP1Q6ZW49 1069 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-212ENST00000539975 TMC2Q8TDI7 906 aa9.36□□□□□ -0.91
SNHG1-212ENST00000539975 PTPRTO14522 1441 aa9.36□□□□□ -0.91
SNHG1-212ENST00000539975 CEP170BQ9Y4F5 1589 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-212ENST00000539975 SETD1BQ9UPS6 1966 aaKnown RBP9.35□□□□□ -0.91
SNHG1-212ENST00000539975 RGL3Q3MIN7 710 aa9.35□□□□□ -0.91
SNHG1-212ENST00000539975 TMEM92Q6UXU6 159 aa9.35□□□□□ -0.91
SNHG1-212ENST00000539975 MYO3AQ8NEV4 1616 aa9.34□□□□□ -0.91
SNHG1-212ENST00000539975 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
SNHG1-212ENST00000539975 NCKAP5LQ9HCH0 1330 aa9.34□□□□□ -0.91
SNHG1-212ENST00000539975 KIF3CO14782 793 aa9.34□□□□□ -0.91
SNHG1-212ENST00000539975 CCER1Q8TC90 406 aaPredicted RBP9.34□□□□□ -0.91
SNHG1-212ENST00000539975 CFAP44Q96MT7 982 aa9.34□□□□□ -0.91
SNHG1-212ENST00000539975 E9PCH4 1651 aa9.34□□□□□ -0.91
SNHG1-212ENST00000539975 TMEM2Q9UHN6 1383 aa9.34□□□□□ -0.91
SNHG1-212ENST00000539975 PLA2R1Q13018 1463 aa9.33□□□□□ -0.92
SNHG1-212ENST00000539975 TRPM2O94759 1503 aa9.32□□□□□ -0.92
SNHG1-212ENST00000539975 C2orf72A6NCS6 295 aa9.32□□□□□ -0.92
SNHG1-212ENST00000539975 NEUROD1Q13562 356 aa9.32□□□□□ -0.92
SNHG1-212ENST00000539975 STAC3Q96MF2 364 aa9.32□□□□□ -0.92
SNHG1-212ENST00000539975 GPHNQ9NQX3 736 aaPredicted RBP9.32□□□□□ -0.92
SNHG1-212ENST00000539975 PDE4AP27815 886 aa9.31□□□□□ -0.92
SNHG1-212ENST00000539975 NUTM2DQ5VT03 806 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-212ENST00000539975 ANKRD30BQ9BXX2 1392 aa9.31□□□□□ -0.92
SNHG1-212ENST00000539975 SYNMO15061 1565 aa9.31□□□□□ -0.92
SNHG1-212ENST00000539975 ADGRB3O60242 1522 aa9.31□□□□□ -0.92
SNHG1-212ENST00000539975 RIMS2Q9UQ26 1411 aa9.31□□□□□ -0.92
SNHG1-212ENST00000539975 DOK7Q18PE1 504 aa9.3□□□□□ -0.92
SNHG1-212ENST00000539975 SCAF11Q99590 1463 aaKnown RBP9.29□□□□□ -0.92
SNHG1-212ENST00000539975 DHX57Q6P158 1386 aaKnown RBP9.29□□□□□ -0.92
SNHG1-212ENST00000539975 SPHKAPQ2M3C7 1700 aa9.29□□□□□ -0.92
SNHG1-212ENST00000539975 LTKP29376 864 aa9.29□□□□□ -0.92
SNHG1-212ENST00000539975 DCAF11Q8TEB1 546 aa9.29□□□□□ -0.92
SNHG1-212ENST00000539975 CRISPLD2Q9H0B8 497 aa9.29□□□□□ -0.92
SNHG1-212ENST00000539975 KDM2AQ9Y2K7 1162 aa9.29□□□□□ -0.92
SNHG1-212ENST00000539975 PIK3C2BO00750 1634 aa9.29□□□□□ -0.92
SNHG1-212ENST00000539975 NPHP4O75161 1426 aaPredicted RBP9.29□□□□□ -0.92
SNHG1-212ENST00000539975 ZNF142P52746 1687 aaPredicted RBP9.29□□□□□ -0.92
SNHG1-212ENST00000539975 CFAP65Q6ZU64 1925 aaKnown RBP9.29□□□□□ -0.92
SNHG1-212ENST00000539975 FOXK1P85037 733 aa9.28□□□□□ -0.92
SNHG1-212ENST00000539975 CLSPNQ9HAW4 1339 aa9.28□□□□□ -0.92
SNHG1-212ENST00000539975 SLIT1O75093 1534 aa9.27□□□□□ -0.93
SNHG1-212ENST00000539975 KDM5AP29375 1690 aaKnown RBP9.27□□□□□ -0.93
SNHG1-212ENST00000539975 RIMBP2O15034 1052 aa9.27□□□□□ -0.93
SNHG1-212ENST00000539975 SLC26A8Q96RN1 970 aa9.27□□□□□ -0.93
SNHG1-212ENST00000539975 ARHGAP23Q9P227 1491 aa9.27□□□□□ -0.93
SNHG1-212ENST00000539975 TONSLQ96HA7 1378 aa9.26□□□□□ -0.93
SNHG1-212ENST00000539975 PLEKHG1Q9ULL1 1385 aa9.26□□□□□ -0.93
SNHG1-212ENST00000539975 UBR1Q8IWV7 1749 aa9.26□□□□□ -0.93
SNHG1-212ENST00000539975 FAM163AQ96GL9 167 aaPredicted RBP9.26□□□□□ -0.93
SNHG1-212ENST00000539975 SIN3AQ96ST3 1273 aa9.26□□□□□ -0.93
SNHG1-212ENST00000539975 ZSWIM6Q9HCJ5 1215 aa9.26□□□□□ -0.93
SNHG1-212ENST00000539975 TBX22Q9Y458 520 aa9.26□□□□□ -0.93
SNHG1-212ENST00000539975 TMEM131LA2VDJ0 1609 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms