RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ADAMTS13Q76LX8 1427 aa23.03■■□□□ 1.28
COPS3-212ENST00000539941 SENP3Q9H4L4 574 aaPredicted RBP23.03■■□□□ 1.28
COPS3-212ENST00000539941 SIRT1Q96EB6 747 aa23.02■■□□□ 1.28
COPS3-212ENST00000539941 METP08581 1390 aa23.02■■□□□ 1.28
COPS3-212ENST00000539941 MED14O60244 1454 aa23.02■■□□□ 1.28
COPS3-212ENST00000539941 PRAM1Q96QH2 718 aa23.01■■□□□ 1.27
COPS3-212ENST00000539941 POGKQ9P215 609 aa23.01■■□□□ 1.27
COPS3-212ENST00000539941 DIP2AQ14689 1571 aa23■■□□□ 1.27
COPS3-212ENST00000539941 FAM135BQ49AJ0 1406 aa23■■□□□ 1.27
COPS3-212ENST00000539941 PARD3Q8TEW0 1356 aa23■■□□□ 1.27
COPS3-212ENST00000539941 BCANQ96GW7 911 aa23■■□□□ 1.27
COPS3-212ENST00000539941 CPS1P31327 1500 aa22.99■■□□□ 1.27
COPS3-212ENST00000539941 NPC1L1Q9UHC9 1359 aa22.98■■□□□ 1.27
COPS3-212ENST00000539941 KNSTRNQ9Y448 316 aa22.98■■□□□ 1.27
COPS3-212ENST00000539941 LTBP4Q8N2S1 1624 aa22.98■■□□□ 1.27
COPS3-212ENST00000539941 NINLQ9Y2I6 1382 aa22.97■■□□□ 1.27
COPS3-212ENST00000539941 MYBBP1AQ9BQG0 1328 aaKnown RBP22.96■■□□□ 1.27
COPS3-212ENST00000539941 ANKLE2Q86XL3 938 aa22.95■■□□□ 1.26
COPS3-212ENST00000539941 MRS2Q9HD23 443 aa22.95■■□□□ 1.26
COPS3-212ENST00000539941 TBX22Q9Y458 520 aa22.95■■□□□ 1.26
COPS3-212ENST00000539941 ZNF335Q9H4Z2 1342 aaPredicted RBP22.95■■□□□ 1.26
COPS3-212ENST00000539941 ATAD2Q6PL18 1390 aa22.94■■□□□ 1.26
COPS3-212ENST00000539941 SAFB2Q14151 953 aaKnown RBP eCLIP22.93■■□□□ 1.26
COPS3-212ENST00000539941 BRD4O60885 1362 aaPredicted RBP22.93■■□□□ 1.26
COPS3-212ENST00000539941 MINK1Q8N4C8 1332 aaPredicted RBP22.92■■□□□ 1.26
COPS3-212ENST00000539941 AMER1Q5JTC6 1135 aaPredicted RBP22.91■■□□□ 1.26
COPS3-212ENST00000539941 CCDC184Q52MB2 194 aa22.9■■□□□ 1.26
COPS3-212ENST00000539941 PLEKHH1Q9ULM0 1364 aa22.89■■□□□ 1.25
COPS3-212ENST00000539941 NLRP13Q86W25 1043 aa22.89■■□□□ 1.25
COPS3-212ENST00000539941 PIK3R4Q99570 1358 aa22.88■■□□□ 1.25
COPS3-212ENST00000539941 SRPK2P78362 688 aaKnown RBP22.88■■□□□ 1.25
COPS3-212ENST00000539941 CNGB1Q14028 1251 aaPredicted RBP22.88■■□□□ 1.25
COPS3-212ENST00000539941 CC2D1BQ5T0F9 858 aaKnown RBP22.88■■□□□ 1.25
COPS3-212ENST00000539941 WAPLQ7Z5K2 1190 aa22.88■■□□□ 1.25
COPS3-212ENST00000539941 TMC1Q8TDI8 760 aa22.88■■□□□ 1.25
COPS3-212ENST00000539941 CABP2Q9NPB3 220 aa22.88■■□□□ 1.25
COPS3-212ENST00000539941 USP32Q8NFA0 1604 aa22.88■■□□□ 1.25
COPS3-212ENST00000539941 ANKRD36BQ8N2N9 1353 aa22.87■■□□□ 1.25
COPS3-212ENST00000539941 SLC12A5Q9H2X9 1139 aa22.87■■□□□ 1.25
COPS3-212ENST00000539941 SLC26A8Q96RN1 970 aa22.86■■□□□ 1.25
COPS3-212ENST00000539941 PTCH1Q13635 1447 aa22.86■■□□□ 1.25
COPS3-212ENST00000539941 CDK19Q9BWU1 502 aa22.85■■□□□ 1.25
COPS3-212ENST00000539941 CARD14Q9BXL6 1004 aa22.85■■□□□ 1.25
COPS3-212ENST00000539941 PTPRUQ92729 1446 aa22.85■■□□□ 1.25
COPS3-212ENST00000539941 ROBO2Q9HCK4 1378 aa22.85■■□□□ 1.25
COPS3-212ENST00000539941 ADGRB2O60241 1585 aa22.84■■□□□ 1.25
COPS3-212ENST00000539941 NSD3Q9BZ95 1437 aa22.83■■□□□ 1.25
COPS3-212ENST00000539941 XRN1Q8IZH2 1706 aaKnown RBP22.83■■□□□ 1.24
COPS3-212ENST00000539941 NPHP4O75161 1426 aaPredicted RBP22.82■■□□□ 1.24
COPS3-212ENST00000539941 WASLO00401 505 aaPredicted RBP22.81■■□□□ 1.24
COPS3-212ENST00000539941 IQSEC2Q5JU85 1478 aa22.81■■□□□ 1.24
COPS3-212ENST00000539941 AMOTL2Q9Y2J4 779 aa22.8■■□□□ 1.24
COPS3-212ENST00000539941 TERF2IPQ9NYB0 399 aa22.79■■□□□ 1.24
COPS3-212ENST00000539941 NSD2O96028 1365 aa22.78■■□□□ 1.24
COPS3-212ENST00000539941 FAM9BQ8IZU0 186 aa22.78■■□□□ 1.24
COPS3-212ENST00000539941 PNISRQ8TF01 805 aaKnown RBP22.78■■□□□ 1.24
COPS3-212ENST00000539941 CGNL1Q0VF96 1302 aa22.78■■□□□ 1.24
COPS3-212ENST00000539941 ATP7BP35670 1465 aa22.77■■□□□ 1.24
COPS3-212ENST00000539941 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.76■■□□□ 1.23
COPS3-212ENST00000539941 A0A1W2PP64 1363 aa22.76■■□□□ 1.23
COPS3-212ENST00000539941 CD163L1Q9NR16 1453 aa22.75■■□□□ 1.23
COPS3-212ENST00000539941 PPP2R1AP30153 589 aa22.74■■□□□ 1.23
COPS3-212ENST00000539941 HNRNPUQ00839 825 aaKnown RBP eCLIP22.74■■□□□ 1.23
COPS3-212ENST00000539941 HDGFL2Q7Z4V5 671 aaPredicted RBP22.74■■□□□ 1.23
COPS3-212ENST00000539941 CHD2O14647 1828 aaKnown RBP22.73■■□□□ 1.23
COPS3-212ENST00000539941 INSRP06213 1382 aa22.71■■□□□ 1.23
COPS3-212ENST00000539941 CABP1Q9NZU7 370 aa22.71■■□□□ 1.23
COPS3-212ENST00000539941 UBAP1LF5GYI3 381 aa22.7■■□□□ 1.22
COPS3-212ENST00000539941 NUDT16Q96DE0 195 aaKnown RBP22.7■■□□□ 1.22
COPS3-212ENST00000539941 CCDC61Q9Y6R9 512 aa22.7■■□□□ 1.22
COPS3-212ENST00000539941 PPIP5K1Q6PFW1 1433 aa22.69■■□□□ 1.22
COPS3-212ENST00000539941 CDC42BPGQ6DT37 1551 aa22.68■■□□□ 1.22
COPS3-212ENST00000539941 CPSF1Q10570 1443 aaKnown RBP22.67■■□□□ 1.22
COPS3-212ENST00000539941 KCNA6P17658 529 aa22.67■■□□□ 1.22
COPS3-212ENST00000539941 MORC1Q86VD1 984 aa22.67■■□□□ 1.22
COPS3-212ENST00000539941 TOPAZ1Q8N9V7 1692 aa22.67■■□□□ 1.22
COPS3-212ENST00000539941 ANKRD26Q9UPS8 1709 aa22.66■■□□□ 1.22
COPS3-212ENST00000539941 ZBED9Q6R2W3 1325 aa22.65■■□□□ 1.22
COPS3-212ENST00000539941 ANP32EQ9BTT0 268 aa22.65■■□□□ 1.22
COPS3-212ENST00000539941 PRR36Q9H6K5 1346 aa22.63■■□□□ 1.21
COPS3-212ENST00000539941 NWD1Q149M9 1564 aa22.63■■□□□ 1.21
COPS3-212ENST00000539941 KIF20BQ96Q89 1820 aa22.63■■□□□ 1.21
COPS3-212ENST00000539941 AKAP12Q02952 1782 aa22.63■■□□□ 1.21
COPS3-212ENST00000539941 ITSN1Q15811 1721 aa22.63■■□□□ 1.21
COPS3-212ENST00000539941 MON2Q7Z3U7 1717 aa22.63■■□□□ 1.21
COPS3-212ENST00000539941 EDC4Q6P2E9 1401 aaKnown RBP22.63■■□□□ 1.21
COPS3-212ENST00000539941 BCL11AQ9H165 835 aa22.62■■□□□ 1.21
COPS3-212ENST00000539941 STRCP1A6NGW2 1772 aa22.62■■□□□ 1.21
COPS3-212ENST00000539941 POLR3AO14802 1390 aaPredicted RBP22.61■■□□□ 1.21
COPS3-212ENST00000539941 ZNF692Q9BU19 519 aaPredicted RBP22.61■■□□□ 1.21
COPS3-212ENST00000539941 ANKARQ7Z5J8 1434 aa22.6■■□□□ 1.21
COPS3-212ENST00000539941 PLEKHG3A1L390 1219 aa22.6■■□□□ 1.21
COPS3-212ENST00000539941 LRRC7Q96NW7 1537 aa22.59■■□□□ 1.21
COPS3-212ENST00000539941 FYB1O15117 783 aa22.59■■□□□ 1.21
COPS3-212ENST00000539941 TOM1O60784 492 aa22.58■■□□□ 1.21
COPS3-212ENST00000539941 BLMP54132 1417 aaPredicted RBP22.58■■□□□ 1.2
COPS3-212ENST00000539941 FMN2Q9NZ56 1722 aa22.57■■□□□ 1.2
COPS3-212ENST00000539941 NALCNQ8IZF0 1738 aa22.56■■□□□ 1.2
COPS3-212ENST00000539941 WDR43Q15061 677 aaKnown RBP eCLIP22.55■■□□□ 1.2
COPS3-212ENST00000539941 ADGRL3Q9HAR2 1447 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms