RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 UBAP1LF5GYI3 381 aa19.82■□□□□ 0.76
PPFIA1-222ENST00000532504 NEXNQ0ZGT2 675 aa19.82■□□□□ 0.76
PPFIA1-222ENST00000532504 UHRF1BP1LA0JNW5 1464 aa19.81■□□□□ 0.76
PPFIA1-222ENST00000532504 AIMP1Q12904 312 aaKnown RBP19.81■□□□□ 0.76
PPFIA1-222ENST00000532504 CNTLNQ9NXG0 1405 aa19.81■□□□□ 0.76
PPFIA1-222ENST00000532504 ZMYM3Q14202 1370 aa19.81■□□□□ 0.76
PPFIA1-222ENST00000532504 PLIN1O60240 522 aa19.8■□□□□ 0.76
PPFIA1-222ENST00000532504 BECN1Q14457 450 aa19.8■□□□□ 0.76
PPFIA1-222ENST00000532504 FAM135AQ9P2D6 1515 aa19.8■□□□□ 0.76
PPFIA1-222ENST00000532504 SMG6Q86US8 1419 aaKnown RBP19.8■□□□□ 0.76
PPFIA1-222ENST00000532504 WASLO00401 505 aaPredicted RBP19.8■□□□□ 0.76
PPFIA1-222ENST00000532504 HMMRO75330 724 aa19.8■□□□□ 0.76
PPFIA1-222ENST00000532504 FKBP5Q13451 457 aaPredicted RBP19.79■□□□□ 0.76
PPFIA1-222ENST00000532504 DUOX2Q9NRD8 1548 aa19.78■□□□□ 0.76
PPFIA1-222ENST00000532504 C9orf78Q9NZ63 289 aaPredicted RBP19.78■□□□□ 0.76
PPFIA1-222ENST00000532504 C14orf93Q9H972 538 aaKnown RBP19.78■□□□□ 0.76
PPFIA1-222ENST00000532504 SF3B2Q13435 895 aaKnown RBP19.77■□□□□ 0.75
PPFIA1-222ENST00000532504 NME9Q86XW9 330 aa19.77■□□□□ 0.75
PPFIA1-222ENST00000532504 TCP11L2Q8N4U5 519 aa19.77■□□□□ 0.75
PPFIA1-222ENST00000532504 GAS2L2Q8NHY3 880 aa19.77■□□□□ 0.75
PPFIA1-222ENST00000532504 GNAI1P63096 354 aa19.76■□□□□ 0.75
PPFIA1-222ENST00000532504 ZNF530Q6P9A1 599 aaPredicted RBP19.76■□□□□ 0.75
PPFIA1-222ENST00000532504 CADPS2Q86UW7 1296 aa19.76■□□□□ 0.75
PPFIA1-222ENST00000532504 NGLY1Q96IV0 654 aa19.76■□□□□ 0.75
PPFIA1-222ENST00000532504 KRT28Q7Z3Y7 464 aa19.74■□□□□ 0.75
PPFIA1-222ENST00000532504 ITSN2Q9NZM3 1697 aa19.74■□□□□ 0.75
PPFIA1-222ENST00000532504 ZKSCAN2Q63HK3 967 aa19.74■□□□□ 0.75
PPFIA1-222ENST00000532504 EIF5BO60841 1220 aaKnown RBP19.74■□□□□ 0.75
PPFIA1-222ENST00000532504 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
PPFIA1-222ENST00000532504 FAM177BA6PVY3 158 aa19.73■□□□□ 0.75
PPFIA1-222ENST00000532504 DDX58O95786 925 aaKnown RBP19.73■□□□□ 0.75
PPFIA1-222ENST00000532504 TRIM6-TRIM34B2RNG4 842 aa19.73■□□□□ 0.75
PPFIA1-222ENST00000532504 NSD3Q9BZ95 1437 aa19.73■□□□□ 0.75
PPFIA1-222ENST00000532504 KCNH5Q8NCM2 988 aa19.72■□□□□ 0.75
PPFIA1-222ENST00000532504 RIMS2Q9UQ26 1411 aa19.71■□□□□ 0.75
PPFIA1-222ENST00000532504 TOM1O60784 492 aa19.71■□□□□ 0.75
PPFIA1-222ENST00000532504 CABP4P57796 275 aa19.71■□□□□ 0.75
PPFIA1-222ENST00000532504 KIAA1211Q6ZU35 1233 aa19.71■□□□□ 0.75
PPFIA1-222ENST00000532504 COG6Q9Y2V7 657 aa19.71■□□□□ 0.75
PPFIA1-222ENST00000532504 TULP1O00294 542 aaPredicted RBP19.71■□□□□ 0.75
PPFIA1-222ENST00000532504 RIC3Q7Z5B4 369 aa19.71■□□□□ 0.75
PPFIA1-222ENST00000532504 MSH6P52701 1360 aa19.71■□□□□ 0.75
PPFIA1-222ENST00000532504 NBR1Q14596 966 aa19.7■□□□□ 0.74
PPFIA1-222ENST00000532504 SPG7Q9UQ90 795 aa19.7■□□□□ 0.74
PPFIA1-222ENST00000532504 GPATCH3Q96I76 525 aa19.7■□□□□ 0.74
PPFIA1-222ENST00000532504 ATP10AO60312 1499 aa19.69■□□□□ 0.74
PPFIA1-222ENST00000532504 USHBP1Q8N6Y0 703 aa19.69■□□□□ 0.74
PPFIA1-222ENST00000532504 ANP32BQ92688 251 aaKnown RBP19.68■□□□□ 0.74
PPFIA1-222ENST00000532504 DNAJC5Q9H3Z4 198 aa19.68■□□□□ 0.74
PPFIA1-222ENST00000532504 DDRGK1Q96HY6 314 aa19.68■□□□□ 0.74
PPFIA1-222ENST00000532504 PPP1R1BQ9UD71 204 aaPredicted RBP19.68■□□□□ 0.74
PPFIA1-222ENST00000532504 ZNF428Q96B54 188 aa19.66■□□□□ 0.74
PPFIA1-222ENST00000532504 MCCP23508 829 aa19.66■□□□□ 0.74
PPFIA1-222ENST00000532504 ZBED9Q6R2W3 1325 aa19.65■□□□□ 0.74
PPFIA1-222ENST00000532504 CHRNA2Q15822 529 aa19.65■□□□□ 0.74
PPFIA1-222ENST00000532504 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.65■□□□□ 0.74
PPFIA1-222ENST00000532504 ACEP12821 1306 aa19.65■□□□□ 0.74
PPFIA1-222ENST00000532504 BRD4O60885 1362 aaPredicted RBP19.65■□□□□ 0.74
PPFIA1-222ENST00000532504 CHD1O14646 1710 aa19.64■□□□□ 0.74
PPFIA1-222ENST00000532504 NCLP19338 710 aaKnown RBP19.64■□□□□ 0.74
PPFIA1-222ENST00000532504 EMILIN1Q9Y6C2 1016 aa19.64■□□□□ 0.73
PPFIA1-222ENST00000532504 API5Q9BZZ5 524 aaKnown RBP19.64■□□□□ 0.73
PPFIA1-222ENST00000532504 KCNA6P17658 529 aa19.63■□□□□ 0.73
PPFIA1-222ENST00000532504 HSP90AB1P08238 724 aaKnown RBP19.63■□□□□ 0.73
PPFIA1-222ENST00000532504 C11orf95C9JLR9 678 aaPredicted RBP19.63■□□□□ 0.73
PPFIA1-222ENST00000532504 RPRD2Q5VT52 1461 aaKnown RBP19.62■□□□□ 0.73
PPFIA1-222ENST00000532504 LRPPRCP42704 1394 aaKnown RBP19.62■□□□□ 0.73
PPFIA1-222ENST00000532504 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
PPFIA1-222ENST00000532504 TSR2Q969E8 191 aaKnown RBP19.61■□□□□ 0.73
PPFIA1-222ENST00000532504 DZIP1LQ8IYY4 767 aaKnown RBP19.6■□□□□ 0.73
PPFIA1-222ENST00000532504 ANKRD45Q5TZF3 282 aa19.6■□□□□ 0.73
PPFIA1-222ENST00000532504 UHRF1BP1Q6BDS2 1440 aa19.6■□□□□ 0.73
PPFIA1-222ENST00000532504 YEATS2Q9ULM3 1422 aa19.6■□□□□ 0.73
PPFIA1-222ENST00000532504 CDCA7LQ96GN5 454 aa19.59■□□□□ 0.73
PPFIA1-222ENST00000532504 SCAF11Q99590 1463 aaKnown RBP19.59■□□□□ 0.73
PPFIA1-222ENST00000532504 CRBNQ96SW2 442 aa19.59■□□□□ 0.73
PPFIA1-222ENST00000532504 TOMM22Q9NS69 142 aa19.59■□□□□ 0.73
PPFIA1-222ENST00000532504 FBLN1P23142 703 aa19.58■□□□□ 0.73
PPFIA1-222ENST00000532504 ATP7AQ04656 1500 aa19.58■□□□□ 0.73
PPFIA1-222ENST00000532504 TCOF1Q13428 1488 aaKnown RBP19.58■□□□□ 0.73
PPFIA1-222ENST00000532504 EXOSC9Q06265 439 aaKnown RBP19.58■□□□□ 0.73
PPFIA1-222ENST00000532504 VPS37DQ86XT2 251 aa19.58■□□□□ 0.72
PPFIA1-222ENST00000532504 SPRYD3Q8NCJ5 442 aa19.58■□□□□ 0.72
PPFIA1-222ENST00000532504 C19orf44Q9H6X5 657 aa19.57■□□□□ 0.72
PPFIA1-222ENST00000532504 RRP1P56182 461 aaKnown RBP19.57■□□□□ 0.72
PPFIA1-222ENST00000532504 EXOC6Q8TAG9 804 aa19.57■□□□□ 0.72
PPFIA1-222ENST00000532504 NEO1Q92859 1461 aa19.57■□□□□ 0.72
PPFIA1-222ENST00000532504 SAMD9Q5K651 1589 aa19.57■□□□□ 0.72
PPFIA1-222ENST00000532504 LMTK3Q96Q04 1460 aa19.57■□□□□ 0.72
PPFIA1-222ENST00000532504 HDGFL1Q5TGJ6 251 aa19.57■□□□□ 0.72
PPFIA1-222ENST00000532504 CCDC30Q5VVM6 783 aa19.57■□□□□ 0.72
PPFIA1-222ENST00000532504 CABLES1Q8TDN4 633 aa19.56■□□□□ 0.72
PPFIA1-222ENST00000532504 GOLGA6L22H0YM25 854 aa19.56■□□□□ 0.72
PPFIA1-222ENST00000532504 ERCC6L2Q5T890 1561 aa19.56■□□□□ 0.72
PPFIA1-222ENST00000532504 PTCD1O75127 700 aaKnown RBP19.56■□□□□ 0.72
PPFIA1-222ENST00000532504 MYL6BP14649 208 aa19.56■□□□□ 0.72
PPFIA1-222ENST00000532504 KIF6Q6ZMV9 814 aa19.56■□□□□ 0.72
PPFIA1-222ENST00000532504 TWISTNBQ3B726 338 aaPredicted RBP19.56■□□□□ 0.72
PPFIA1-222ENST00000532504 RILPL2Q969X0 211 aa19.55■□□□□ 0.72
PPFIA1-222ENST00000532504 NPHP3Q7Z494 1330 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms