RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 POTEEQ6S8J3 1075 aa12.96□□□□□ -0.33
POLB-216ENST00000530566 MYO5CQ9NQX4 1742 aa12.96□□□□□ -0.34
POLB-216ENST00000530566 CLTCQ00610 1675 aaKnown RBP12.96□□□□□ -0.34
POLB-216ENST00000530566 ZNF772Q68DY9 489 aaPredicted RBP12.95□□□□□ -0.34
POLB-216ENST00000530566 SYNMO15061 1565 aa12.94□□□□□ -0.34
POLB-216ENST00000530566 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
POLB-216ENST00000530566 NPHP4O75161 1426 aaPredicted RBP12.94□□□□□ -0.34
POLB-216ENST00000530566 FAM135BQ49AJ0 1406 aa12.94□□□□□ -0.34
POLB-216ENST00000530566 ARHGAP5Q13017 1502 aa12.93□□□□□ -0.34
POLB-216ENST00000530566 RXRBP28702 533 aa12.92□□□□□ -0.34
POLB-216ENST00000530566 ADGRD1Q6QNK2 874 aa12.92□□□□□ -0.34
POLB-216ENST00000530566 TK2O00142 265 aa12.91□□□□□ -0.34
POLB-216ENST00000530566 MFSD10Q14728 455 aa12.91□□□□□ -0.34
POLB-216ENST00000530566 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
POLB-216ENST00000530566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
POLB-216ENST00000530566 STRCP1A6NGW2 1772 aa12.9□□□□□ -0.34
POLB-216ENST00000530566 MEX3CQ5U5Q3 659 aaKnown RBP12.9□□□□□ -0.34
POLB-216ENST00000530566 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
POLB-216ENST00000530566 RBM33Q96EV2 1170 aaKnown RBP12.9□□□□□ -0.34
POLB-216ENST00000530566 MED14O60244 1454 aa12.9□□□□□ -0.34
POLB-216ENST00000530566 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
POLB-216ENST00000530566 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
POLB-216ENST00000530566 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
POLB-216ENST00000530566 JCADQ9P266 1359 aa12.87□□□□□ -0.35
POLB-216ENST00000530566 PSEN2P49810 448 aa12.87□□□□□ -0.35
POLB-216ENST00000530566 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
POLB-216ENST00000530566 GGT6Q6P531 493 aa12.87□□□□□ -0.35
POLB-216ENST00000530566 ABCC1P33527 1531 aa12.87□□□□□ -0.35
POLB-216ENST00000530566 CDK13Q14004 1512 aaKnown RBP12.87□□□□□ -0.35
POLB-216ENST00000530566 KIDINS220Q9ULH0 1771 aa12.86□□□□□ -0.35
POLB-216ENST00000530566 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
POLB-216ENST00000530566 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
POLB-216ENST00000530566 CDK12Q9NYV4 1490 aaPredicted RBP12.86□□□□□ -0.35
POLB-216ENST00000530566 DEPDC5O75140 1603 aa12.86□□□□□ -0.35
POLB-216ENST00000530566 PRXQ9BXM0 1461 aa12.85□□□□□ -0.35
POLB-216ENST00000530566 EVI5O60447 810 aa12.85□□□□□ -0.35
POLB-216ENST00000530566 RANGAP1P46060 587 aaPredicted RBP12.85□□□□□ -0.35
POLB-216ENST00000530566 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
POLB-216ENST00000530566 KCNK17Q96T54 332 aa12.85□□□□□ -0.35
POLB-216ENST00000530566 ANO8Q9HCE9 1232 aaPredicted RBP12.85□□□□□ -0.35
POLB-216ENST00000530566 TNRQ92752 1358 aa12.84□□□□□ -0.35
POLB-216ENST00000530566 ITSN2Q9NZM3 1697 aa12.84□□□□□ -0.35
POLB-216ENST00000530566 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
POLB-216ENST00000530566 ROBO1Q9Y6N7 1651 aa12.83□□□□□ -0.35
POLB-216ENST00000530566 FOSBP53539 338 aa12.83□□□□□ -0.36
POLB-216ENST00000530566 NUTM2BA6NNL0 878 aaPredicted RBP12.82□□□□□ -0.36
POLB-216ENST00000530566 NUTM2EB1AL46 878 aaPredicted RBP12.82□□□□□ -0.36
POLB-216ENST00000530566 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
POLB-216ENST00000530566 NUTM2AQ8IVF1 878 aaPredicted RBP12.82□□□□□ -0.36
POLB-216ENST00000530566 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
POLB-216ENST00000530566 CDK11AQ9UQ88 783 aaPredicted RBP12.82□□□□□ -0.36
POLB-216ENST00000530566 FAM135AQ9P2D6 1515 aa12.82□□□□□ -0.36
POLB-216ENST00000530566 FBXO31Q5XUX0 539 aaPredicted RBP12.81□□□□□ -0.36
POLB-216ENST00000530566 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
POLB-216ENST00000530566 PTPREP23469 700 aa12.8□□□□□ -0.36
POLB-216ENST00000530566 CADPS2Q86UW7 1296 aa12.8□□□□□ -0.36
POLB-216ENST00000530566 SPATA31A6Q5VVP1 1343 aa12.8□□□□□ -0.36
POLB-216ENST00000530566 KIF14Q15058 1648 aa12.8□□□□□ -0.36
POLB-216ENST00000530566 UGGT1Q9NYU2 1555 aa12.79□□□□□ -0.36
POLB-216ENST00000530566 HRO43593 1189 aa12.79□□□□□ -0.36
POLB-216ENST00000530566 HCSTQ9UBK5 93 aa12.79□□□□□ -0.36
POLB-216ENST00000530566 LRP6O75581 1613 aa12.79□□□□□ -0.36
POLB-216ENST00000530566 ZDHHC16Q969W1 377 aa12.78□□□□□ -0.36
POLB-216ENST00000530566 ATP1B4Q9UN42 357 aaPredicted RBP12.78□□□□□ -0.36
POLB-216ENST00000530566 PHLPP1O60346 1717 aa12.78□□□□□ -0.36
POLB-216ENST00000530566 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
POLB-216ENST00000530566 XIRP1Q702N8 1843 aaKnown RBP12.77□□□□□ -0.37
POLB-216ENST00000530566 SPRYD3Q8NCJ5 442 aa12.77□□□□□ -0.37
POLB-216ENST00000530566 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
POLB-216ENST00000530566 SPAG9O60271 1321 aaKnown RBP12.77□□□□□ -0.37
POLB-216ENST00000530566 SLC4A5Q9BY07 1137 aa12.76□□□□□ -0.37
POLB-216ENST00000530566 A2MP01023 1474 aa12.76□□□□□ -0.37
POLB-216ENST00000530566 LRRC9Q6ZRR7 1453 aa12.76□□□□□ -0.37
POLB-216ENST00000530566 ATAD2Q6PL18 1390 aa12.75□□□□□ -0.37
POLB-216ENST00000530566 NLRP1Q9C000 1473 aa12.75□□□□□ -0.37
POLB-216ENST00000530566 CDC42BPBQ9Y5S2 1711 aa12.75□□□□□ -0.37
POLB-216ENST00000530566 PLXNC1O60486 1568 aa12.74□□□□□ -0.37
POLB-216ENST00000530566 SAMD9LQ8IVG5 1584 aa12.74□□□□□ -0.37
POLB-216ENST00000530566 RGS12O14924 1447 aa12.74□□□□□ -0.37
POLB-216ENST00000530566 CLIP1P30622 1438 aa12.74□□□□□ -0.37
POLB-216ENST00000530566 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
POLB-216ENST00000530566 TMEM94Q12767 1356 aa12.73□□□□□ -0.37
POLB-216ENST00000530566 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
POLB-216ENST00000530566 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
POLB-216ENST00000530566 PZPP20742 1482 aa12.72□□□□□ -0.37
POLB-216ENST00000530566 TROQ12816 1431 aaPredicted RBP12.71□□□□□ -0.37
POLB-216ENST00000530566 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.37
POLB-216ENST00000530566 RBM6P78332 1123 aaKnown RBP12.71□□□□□ -0.37
POLB-216ENST00000530566 CAMK2BQ13554 666 aa12.71□□□□□ -0.37
POLB-216ENST00000530566 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
POLB-216ENST00000530566 AFF2P51816 1311 aa12.7□□□□□ -0.38
POLB-216ENST00000530566 ADAM33Q9BZ11 813 aa12.7□□□□□ -0.38
POLB-216ENST00000530566 SLAIN2Q9P270 581 aa12.7□□□□□ -0.38
POLB-216ENST00000530566 ATP7AQ04656 1500 aa12.7□□□□□ -0.38
POLB-216ENST00000530566 PREX2Q70Z35 1606 aa12.7□□□□□ -0.38
POLB-216ENST00000530566 FBXW7Q969H0 707 aa12.69□□□□□ -0.38
POLB-216ENST00000530566 ZNF777Q9ULD5 760 aaPredicted RBP12.69□□□□□ -0.38
POLB-216ENST00000530566 COL16A1Q07092 1604 aaPredicted RBP12.69□□□□□ -0.38
POLB-216ENST00000530566 YY1P25490 414 aa12.68□□□□□ -0.38
POLB-216ENST00000530566 KCTD12Q96CX2 325 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms