RNA–Protein interactions for RNA: ENST00000525009.5

ATG13-204, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-204ENST00000525009 EVC2Q86UK5 1308 aa14.59□□□□□ -0.07
ATG13-204ENST00000525009 KTN1Q86UP2 1357 aaKnown RBP14.59□□□□□ -0.07
ATG13-204ENST00000525009 QRICH2Q9H0J4 1663 aa14.58□□□□□ -0.07
ATG13-204ENST00000525009 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.07
ATG13-204ENST00000525009 ABCC11Q96J66 1382 aa14.58□□□□□ -0.08
ATG13-204ENST00000525009 DLC1Q96QB1 1528 aa14.57□□□□□ -0.08
ATG13-204ENST00000525009 RALBP1Q15311 655 aa14.57□□□□□ -0.08
ATG13-204ENST00000525009 SIRT1Q96EB6 747 aa14.57□□□□□ -0.08
ATG13-204ENST00000525009 PRAM1Q96QH2 718 aa14.57□□□□□ -0.08
ATG13-204ENST00000525009 NRXN3Q9Y4C0 1643 aa14.56□□□□□ -0.08
ATG13-204ENST00000525009 METP08581 1390 aa14.56□□□□□ -0.08
ATG13-204ENST00000525009 SETD1AO15047 1707 aaKnown RBP14.55□□□□□ -0.08
ATG13-204ENST00000525009 POTEAQ6S8J7 498 aa14.55□□□□□ -0.08
ATG13-204ENST00000525009 KNSTRNQ9Y448 316 aa14.54□□□□□ -0.08
ATG13-204ENST00000525009 ADAMTS13Q76LX8 1427 aa14.54□□□□□ -0.08
ATG13-204ENST00000525009 SAFB2Q14151 953 aaKnown RBP eCLIP14.53□□□□□ -0.08
ATG13-204ENST00000525009 TBX22Q9Y458 520 aa14.53□□□□□ -0.08
ATG13-204ENST00000525009 MED14O60244 1454 aa14.52□□□□□ -0.08
ATG13-204ENST00000525009 ANKLE2Q86XL3 938 aa14.52□□□□□ -0.09
ATG13-204ENST00000525009 TECPR2O15040 1411 aa14.51□□□□□ -0.09
ATG13-204ENST00000525009 FAM135BQ49AJ0 1406 aa14.51□□□□□ -0.09
ATG13-204ENST00000525009 MINK1Q8N4C8 1332 aaPredicted RBP14.51□□□□□ -0.09
ATG13-204ENST00000525009 CNGB1Q14028 1251 aaPredicted RBP14.51□□□□□ -0.09
ATG13-204ENST00000525009 MRS2Q9HD23 443 aa14.51□□□□□ -0.09
ATG13-204ENST00000525009 TULP4Q9NRJ4 1543 aa14.51□□□□□ -0.09
ATG13-204ENST00000525009 MYBBP1AQ9BQG0 1328 aaKnown RBP14.5□□□□□ -0.09
ATG13-204ENST00000525009 MYOM1P52179 1685 aa14.5□□□□□ -0.09
ATG13-204ENST00000525009 SRPK2P78362 688 aaKnown RBP14.5□□□□□ -0.09
ATG13-204ENST00000525009 NPHP4O75161 1426 aaPredicted RBP14.49□□□□□ -0.09
ATG13-204ENST00000525009 PARD3Q8TEW0 1356 aa14.49□□□□□ -0.09
ATG13-204ENST00000525009 NINLQ9Y2I6 1382 aa14.49□□□□□ -0.09
ATG13-204ENST00000525009 DIP2AQ14689 1571 aa14.49□□□□□ -0.09
ATG13-204ENST00000525009 WAPLQ7Z5K2 1190 aa14.49□□□□□ -0.09
ATG13-204ENST00000525009 TMC1Q8TDI8 760 aa14.49□□□□□ -0.09
ATG13-204ENST00000525009 SLC26A8Q96RN1 970 aa14.49□□□□□ -0.09
ATG13-204ENST00000525009 CABP2Q9NPB3 220 aa14.49□□□□□ -0.09
ATG13-204ENST00000525009 LRRC7Q96NW7 1537 aa14.49□□□□□ -0.09
ATG13-204ENST00000525009 ATAD2Q6PL18 1390 aa14.48□□□□□ -0.09
ATG13-204ENST00000525009 NPC1L1Q9UHC9 1359 aa14.48□□□□□ -0.09
ATG13-204ENST00000525009 CCDC184Q52MB2 194 aa14.48□□□□□ -0.09
ATG13-204ENST00000525009 CC2D1BQ5T0F9 858 aaKnown RBP14.48□□□□□ -0.09
ATG13-204ENST00000525009 CDK19Q9BWU1 502 aa14.48□□□□□ -0.09
ATG13-204ENST00000525009 KNDC1Q76NI1 1749 aa14.48□□□□□ -0.09
ATG13-204ENST00000525009 AMER1Q5JTC6 1135 aaPredicted RBP14.47□□□□□ -0.09
ATG13-204ENST00000525009 SLC12A5Q9H2X9 1139 aa14.47□□□□□ -0.09
ATG13-204ENST00000525009 PLEKHH1Q9ULM0 1364 aa14.47□□□□□ -0.09
ATG13-204ENST00000525009 BRD4O60885 1362 aaPredicted RBP14.46□□□□□ -0.1
ATG13-204ENST00000525009 PIK3R4Q99570 1358 aa14.46□□□□□ -0.1
ATG13-204ENST00000525009 NLRP13Q86W25 1043 aa14.45□□□□□ -0.1
ATG13-204ENST00000525009 CARD14Q9BXL6 1004 aa14.45□□□□□ -0.1
ATG13-204ENST00000525009 AMOTL2Q9Y2J4 779 aa14.45□□□□□ -0.1
ATG13-204ENST00000525009 STRCP1A6NGW2 1772 aa14.45□□□□□ -0.1
ATG13-204ENST00000525009 WASLO00401 505 aaPredicted RBP14.44□□□□□ -0.1
ATG13-204ENST00000525009 ANKRD36BQ8N2N9 1353 aa14.44□□□□□ -0.1
ATG13-204ENST00000525009 PTPRUQ92729 1446 aa14.43□□□□□ -0.1
ATG13-204ENST00000525009 TERF2IPQ9NYB0 399 aa14.43□□□□□ -0.1
ATG13-204ENST00000525009 ROBO2Q9HCK4 1378 aa14.43□□□□□ -0.1
ATG13-204ENST00000525009 FAM9BQ8IZU0 186 aa14.42□□□□□ -0.1
ATG13-204ENST00000525009 PTCH1Q13635 1447 aa14.41□□□□□ -0.1
ATG13-204ENST00000525009 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
ATG13-204ENST00000525009 HDGFL2Q7Z4V5 671 aaPredicted RBP14.4□□□□□ -0.1
ATG13-204ENST00000525009 CGNL1Q0VF96 1302 aa14.4□□□□□ -0.1
ATG13-204ENST00000525009 PNISRQ8TF01 805 aaKnown RBP14.39□□□□□ -0.11
ATG13-204ENST00000525009 UPF1Q92900 1129 aaKnown RBP eCLIP14.39□□□□□ -0.11
ATG13-204ENST00000525009 PPP2R1AP30153 589 aa14.38□□□□□ -0.11
ATG13-204ENST00000525009 CABP1Q9NZU7 370 aa14.38□□□□□ -0.11
ATG13-204ENST00000525009 NSD2O96028 1365 aa14.37□□□□□ -0.11
ATG13-204ENST00000525009 NUDT16Q96DE0 195 aaKnown RBP14.37□□□□□ -0.11
ATG13-204ENST00000525009 CCDC61Q9Y6R9 512 aa14.37□□□□□ -0.11
ATG13-204ENST00000525009 ADGRB2O60241 1585 aa14.37□□□□□ -0.11
ATG13-204ENST00000525009 USP32Q8NFA0 1604 aa14.37□□□□□ -0.11
ATG13-204ENST00000525009 A0A1W2PP64 1363 aa14.36□□□□□ -0.11
ATG13-204ENST00000525009 HNRNPUQ00839 825 aaKnown RBP eCLIP14.36□□□□□ -0.11
ATG13-204ENST00000525009 ATP7BP35670 1465 aa14.36□□□□□ -0.11
ATG13-204ENST00000525009 XRN1Q8IZH2 1706 aaKnown RBP14.35□□□□□ -0.11
ATG13-204ENST00000525009 KCNA6P17658 529 aa14.35□□□□□ -0.11
ATG13-204ENST00000525009 MORC1Q86VD1 984 aa14.35□□□□□ -0.11
ATG13-204ENST00000525009 PPIP5K1Q6PFW1 1433 aa14.34□□□□□ -0.11
ATG13-204ENST00000525009 CD163L1Q9NR16 1453 aa14.34□□□□□ -0.11
ATG13-204ENST00000525009 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.34□□□□□ -0.11
ATG13-204ENST00000525009 ZNF692Q9BU19 519 aaPredicted RBP14.33□□□□□ -0.12
ATG13-204ENST00000525009 XIRP1Q702N8 1843 aaKnown RBP14.32□□□□□ -0.12
ATG13-204ENST00000525009 PRR36Q9H6K5 1346 aa14.31□□□□□ -0.12
ATG13-204ENST00000525009 SRCAPQ6ZRS2 3230 aa14.31□□□□□ -0.12
ATG13-204ENST00000525009 CPSF1Q10570 1443 aaKnown RBP14.31□□□□□ -0.12
ATG13-204ENST00000525009 CHD2O14647 1828 aaKnown RBP14.3□□□□□ -0.12
ATG13-204ENST00000525009 PLEKHG3A1L390 1219 aa14.3□□□□□ -0.12
ATG13-204ENST00000525009 INSRP06213 1382 aa14.3□□□□□ -0.12
ATG13-204ENST00000525009 FYB1O15117 783 aa14.29□□□□□ -0.12
ATG13-204ENST00000525009 CDC42BPGQ6DT37 1551 aa14.28□□□□□ -0.12
ATG13-204ENST00000525009 EDC4Q6P2E9 1401 aaKnown RBP14.28□□□□□ -0.12
ATG13-204ENST00000525009 ROBO1Q9Y6N7 1651 aa14.28□□□□□ -0.12
ATG13-204ENST00000525009 ZBED9Q6R2W3 1325 aa14.27□□□□□ -0.12
ATG13-204ENST00000525009 WDR43Q15061 677 aaKnown RBP eCLIP14.27□□□□□ -0.13
ATG13-204ENST00000525009 GGNBP2Q9H3C7 697 aa14.27□□□□□ -0.13
ATG13-204ENST00000525009 ANKARQ7Z5J8 1434 aa14.26□□□□□ -0.13
ATG13-204ENST00000525009 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
ATG13-204ENST00000525009 JCADQ9P266 1359 aa14.26□□□□□ -0.13
ATG13-204ENST00000525009 TMEM94Q12767 1356 aa14.25□□□□□ -0.13
ATG13-204ENST00000525009 ACEP12821 1306 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms