RNA–Protein interactions for RNA: ENST00000525009.5

ATG13-204, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-204ENST00000525009 NISCHQ9Y2I1 1504 aa24.14■■□□□ 1.45
ATG13-204ENST00000525009 ABCC9O60706 1549 aa21.2■□□□□ 0.98
ATG13-204ENST00000525009 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
ATG13-204ENST00000525009 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
ATG13-204ENST00000525009 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
ATG13-204ENST00000525009 DCAF1Q9Y4B6 1507 aa19.99■□□□□ 0.79
ATG13-204ENST00000525009 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
ATG13-204ENST00000525009 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
ATG13-204ENST00000525009 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
ATG13-204ENST00000525009 NACADO15069 1562 aa19.65■□□□□ 0.74
ATG13-204ENST00000525009 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
ATG13-204ENST00000525009 SHROOM4Q9ULL8 1493 aa19.64■□□□□ 0.73
ATG13-204ENST00000525009 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
ATG13-204ENST00000525009 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
ATG13-204ENST00000525009 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
ATG13-204ENST00000525009 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
ATG13-204ENST00000525009 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
ATG13-204ENST00000525009 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
ATG13-204ENST00000525009 SUPT5HO00267 1087 aaKnown RBP18.92■□□□□ 0.62
ATG13-204ENST00000525009 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
ATG13-204ENST00000525009 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
ATG13-204ENST00000525009 BAZ1AQ9NRL2 1556 aaPredicted RBP18.65■□□□□ 0.58
ATG13-204ENST00000525009 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
ATG13-204ENST00000525009 CUX2O14529 1486 aa18.56■□□□□ 0.56
ATG13-204ENST00000525009 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
ATG13-204ENST00000525009 WIZO95785 1651 aa18.45■□□□□ 0.54
ATG13-204ENST00000525009 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
ATG13-204ENST00000525009 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
ATG13-204ENST00000525009 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
ATG13-204ENST00000525009 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.52
ATG13-204ENST00000525009 SMARCA2P51531 1590 aa18.27■□□□□ 0.52
ATG13-204ENST00000525009 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
ATG13-204ENST00000525009 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
ATG13-204ENST00000525009 NCAPD3P42695 1498 aa18.15■□□□□ 0.5
ATG13-204ENST00000525009 CCDC88BA6NC98 1476 aa18.12■□□□□ 0.49
ATG13-204ENST00000525009 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
ATG13-204ENST00000525009 HMGXB3Q12766 1538 aa18.09■□□□□ 0.49
ATG13-204ENST00000525009 NESP48681 1621 aa18.01■□□□□ 0.47
ATG13-204ENST00000525009 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
ATG13-204ENST00000525009 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
ATG13-204ENST00000525009 KIF21AQ7Z4S6 1674 aa17.72■□□□□ 0.43
ATG13-204ENST00000525009 CFTRP13569 1480 aa17.72■□□□□ 0.43
ATG13-204ENST00000525009 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
ATG13-204ENST00000525009 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
ATG13-204ENST00000525009 ABCC8Q09428 1581 aa17.68■□□□□ 0.42
ATG13-204ENST00000525009 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
ATG13-204ENST00000525009 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
ATG13-204ENST00000525009 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
ATG13-204ENST00000525009 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
ATG13-204ENST00000525009 WDR62O43379 1518 aa17.55■□□□□ 0.4
ATG13-204ENST00000525009 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
ATG13-204ENST00000525009 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
ATG13-204ENST00000525009 FANCD2Q9BXW9 1451 aa17.46■□□□□ 0.39
ATG13-204ENST00000525009 FAM9AQ8IZU1 332 aaPredicted RBP17.45■□□□□ 0.38
ATG13-204ENST00000525009 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
ATG13-204ENST00000525009 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
ATG13-204ENST00000525009 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
ATG13-204ENST00000525009 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
ATG13-204ENST00000525009 CUX1P39880 1505 aa17.42■□□□□ 0.38
ATG13-204ENST00000525009 EEA1Q15075 1411 aa17.4■□□□□ 0.38
ATG13-204ENST00000525009 LOC105371045A0A1W2PR82 267 aa17.39■□□□□ 0.37
ATG13-204ENST00000525009 SOGA1O94964 1423 aa17.38■□□□□ 0.37
ATG13-204ENST00000525009 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
ATG13-204ENST00000525009 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
ATG13-204ENST00000525009 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
ATG13-204ENST00000525009 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
ATG13-204ENST00000525009 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
ATG13-204ENST00000525009 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
ATG13-204ENST00000525009 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
ATG13-204ENST00000525009 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
ATG13-204ENST00000525009 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
ATG13-204ENST00000525009 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
ATG13-204ENST00000525009 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.35
ATG13-204ENST00000525009 KIF27Q86VH2 1401 aa17.21■□□□□ 0.34
ATG13-204ENST00000525009 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
ATG13-204ENST00000525009 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
ATG13-204ENST00000525009 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
ATG13-204ENST00000525009 KIF21BO75037 1637 aa17.12■□□□□ 0.33
ATG13-204ENST00000525009 ARAP1Q96P48 1450 aa17.11■□□□□ 0.33
ATG13-204ENST00000525009 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
ATG13-204ENST00000525009 RAD54L2Q9Y4B4 1467 aa17.1■□□□□ 0.33
ATG13-204ENST00000525009 ZNF608Q9ULD9 1512 aaPredicted RBP17.1■□□□□ 0.33
ATG13-204ENST00000525009 TNIKQ9UKE5 1360 aa17.09■□□□□ 0.33
ATG13-204ENST00000525009 UBTFP17480 764 aaKnown RBP17.08■□□□□ 0.32
ATG13-204ENST00000525009 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
ATG13-204ENST00000525009 PRXQ9BXM0 1461 aa17.05■□□□□ 0.32
ATG13-204ENST00000525009 IGF1RP08069 1367 aa17.05■□□□□ 0.32
ATG13-204ENST00000525009 ERICH3Q5RHP9 1530 aa17.02■□□□□ 0.32
ATG13-204ENST00000525009 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
ATG13-204ENST00000525009 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
ATG13-204ENST00000525009 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
ATG13-204ENST00000525009 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
ATG13-204ENST00000525009 TDRD9Q8NDG6 1382 aaKnown RBP16.96■□□□□ 0.31
ATG13-204ENST00000525009 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
ATG13-204ENST00000525009 CHD1O14646 1710 aa16.95■□□□□ 0.3
ATG13-204ENST00000525009 CEP162Q5TB80 1403 aa16.95■□□□□ 0.3
ATG13-204ENST00000525009 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
ATG13-204ENST00000525009 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
ATG13-204ENST00000525009 FBLN2P98095 1184 aa16.9■□□□□ 0.3
ATG13-204ENST00000525009 CUL7Q14999 1698 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms