RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 ILDR1Q86SU0 546 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-241ENST00000524127 NPHP4O75161 1426 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-241ENST00000524127 SCAF11Q99590 1463 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-241ENST00000524127 TRPM2O94759 1503 aa6.47□□□□□ -1.37
CTNNA1-241ENST00000524127 PKD2Q13563 968 aa6.47□□□□□ -1.37
CTNNA1-241ENST00000524127 NFKBIBQ15653 356 aa6.47□□□□□ -1.37
CTNNA1-241ENST00000524127 NPM2Q86SE8 214 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-241ENST00000524127 THEMISQ8N1K5 641 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-241ENST00000524127 FAM43AQ8N2R8 423 aa6.47□□□□□ -1.37
CTNNA1-241ENST00000524127 CARD11Q9BXL7 1154 aa6.47□□□□□ -1.37
CTNNA1-241ENST00000524127 RSPH6AQ9H0K4 717 aa6.47□□□□□ -1.37
CTNNA1-241ENST00000524127 LAS1LQ9Y4W2 734 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-241ENST00000524127 EIF3AQ14152 1382 aaKnown RBP6.46□□□□□ -1.37
CTNNA1-241ENST00000524127 FAM161AQ3B820 660 aa6.46□□□□□ -1.38
CTNNA1-241ENST00000524127 CERKQ8TCT0 537 aa6.46□□□□□ -1.38
CTNNA1-241ENST00000524127 CHD2O14647 1828 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-241ENST00000524127 KIF1BO60333 1816 aa6.46□□□□□ -1.38
CTNNA1-241ENST00000524127 NEXMIFQ5QGS0 1516 aa6.45□□□□□ -1.38
CTNNA1-241ENST00000524127 SETD1AO15047 1707 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-241ENST00000524127 ADAMTS13Q76LX8 1427 aa6.45□□□□□ -1.38
CTNNA1-241ENST00000524127 RIMS2Q9UQ26 1411 aa6.45□□□□□ -1.38
CTNNA1-241ENST00000524127 NUTM2DQ5VT03 806 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-241ENST00000524127 TXNDC2Q86VQ3 553 aa6.45□□□□□ -1.38
CTNNA1-241ENST00000524127 ANKLE2Q86XL3 938 aa6.45□□□□□ -1.38
CTNNA1-241ENST00000524127 SLC52A1Q9NWF4 448 aa6.45□□□□□ -1.38
CTNNA1-241ENST00000524127 DAXXQ9UER7 740 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-241ENST00000524127 IFT172Q9UG01 1749 aa6.45□□□□□ -1.38
CTNNA1-241ENST00000524127 PPLO60437 1756 aa6.44□□□□□ -1.38
CTNNA1-241ENST00000524127 CCDC144AA2RUR9 1427 aa6.44□□□□□ -1.38
CTNNA1-241ENST00000524127 ST20-MTHFSA0A0A6YYL1 179 aa6.44□□□□□ -1.38
CTNNA1-241ENST00000524127 PER1O15534 1290 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-241ENST00000524127 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-241ENST00000524127 CRBNQ96SW2 442 aa6.44□□□□□ -1.38
CTNNA1-241ENST00000524127 DMRT2Q9Y5R5 561 aa6.44□□□□□ -1.38
CTNNA1-241ENST00000524127 LRRC7Q96NW7 1537 aa6.44□□□□□ -1.38
CTNNA1-241ENST00000524127 TRPM1Q7Z4N2 1603 aa6.43□□□□□ -1.38
CTNNA1-241ENST00000524127 PRAG1Q86YV5 1406 aa6.43□□□□□ -1.38
CTNNA1-241ENST00000524127 PTPRUQ92729 1446 aa6.43□□□□□ -1.38
CTNNA1-241ENST00000524127 NGEFQ8N5V2 710 aa6.43□□□□□ -1.38
CTNNA1-241ENST00000524127 FRAT1Q92837 279 aaPredicted RBP6.43□□□□□ -1.38
CTNNA1-241ENST00000524127 SLC26A8Q96RN1 970 aa6.43□□□□□ -1.38
CTNNA1-241ENST00000524127 NWD1Q149M9 1564 aa6.43□□□□□ -1.38
CTNNA1-241ENST00000524127 C8orf34Q49A92 452 aa6.42□□□□□ -1.38
CTNNA1-241ENST00000524127 FBXO41Q8TF61 875 aa6.42□□□□□ -1.38
CTNNA1-241ENST00000524127 POLR3GLQ9BT43 218 aa6.42□□□□□ -1.38
CTNNA1-241ENST00000524127 BRPF3Q9ULD4 1205 aa6.42□□□□□ -1.38
CTNNA1-241ENST00000524127 ZNF521Q96K83 1311 aa6.42□□□□□ -1.38
CTNNA1-241ENST00000524127 PLEKHG1Q9ULL1 1385 aa6.42□□□□□ -1.38
CTNNA1-241ENST00000524127 NINLQ9Y2I6 1382 aa6.42□□□□□ -1.38
CTNNA1-241ENST00000524127 SETBP1Q9Y6X0 1596 aa6.41□□□□□ -1.38
CTNNA1-241ENST00000524127 CHGAP10645 457 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-241ENST00000524127 AAMPQ13685 434 aa6.41□□□□□ -1.38
CTNNA1-241ENST00000524127 L1TD1Q5T7N2 865 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-241ENST00000524127 RBM33Q96EV2 1170 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-241ENST00000524127 RTN4Q9NQC3 1192 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-241ENST00000524127 NPC1L1Q9UHC9 1359 aa6.41□□□□□ -1.38
CTNNA1-241ENST00000524127 IQSEC2Q5JU85 1478 aa6.41□□□□□ -1.38
CTNNA1-241ENST00000524127 CPS1P31327 1500 aa6.4□□□□□ -1.38
CTNNA1-241ENST00000524127 ASXL1Q8IXJ9 1541 aa6.4□□□□□ -1.38
CTNNA1-241ENST00000524127 XRN1Q8IZH2 1706 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-241ENST00000524127 ZNF326Q5BKZ1 582 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-241ENST00000524127 TRMT2AQ8IZ69 625 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-241ENST00000524127 CDCA7LQ96GN5 454 aa6.4□□□□□ -1.38
CTNNA1-241ENST00000524127 STAG3Q9UJ98 1225 aa6.4□□□□□ -1.38
CTNNA1-241ENST00000524127 PIK3C2GO75747 1445 aa6.4□□□□□ -1.39
CTNNA1-241ENST00000524127 VIRMAQ69YN4 1812 aaKnown RBP6.39□□□□□ -1.39
CTNNA1-241ENST00000524127 BECN1Q14457 450 aa6.39□□□□□ -1.39
CTNNA1-241ENST00000524127 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
CTNNA1-241ENST00000524127 METP08581 1390 aa6.39□□□□□ -1.39
CTNNA1-241ENST00000524127 GOLGA2Q08379 1002 aa6.38□□□□□ -1.39
CTNNA1-241ENST00000524127 DCAF11Q8TEB1 546 aa6.38□□□□□ -1.39
CTNNA1-241ENST00000524127 TESK2Q96S53 571 aa6.38□□□□□ -1.39
CTNNA1-241ENST00000524127 EID1Q9Y6B2 187 aa6.38□□□□□ -1.39
CTNNA1-241ENST00000524127 ADGRF5Q8IZF2 1346 aa6.38□□□□□ -1.39
CTNNA1-241ENST00000524127 MAPK8IP3Q9UPT6 1336 aa6.38□□□□□ -1.39
CTNNA1-241ENST00000524127 DIP2AQ14689 1571 aa6.38□□□□□ -1.39
CTNNA1-241ENST00000524127 TMEM94Q12767 1356 aa6.37□□□□□ -1.39
CTNNA1-241ENST00000524127 CGNL1Q0VF96 1302 aa6.37□□□□□ -1.39
CTNNA1-241ENST00000524127 PLIN1O60240 522 aa6.37□□□□□ -1.39
CTNNA1-241ENST00000524127 FRAT2O75474 233 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-241ENST00000524127 KCNA6P17658 529 aa6.37□□□□□ -1.39
CTNNA1-241ENST00000524127 TMF1P82094 1093 aa6.37□□□□□ -1.39
CTNNA1-241ENST00000524127 SLFN5Q08AF3 891 aa6.37□□□□□ -1.39
CTNNA1-241ENST00000524127 STAC3Q96MF2 364 aa6.37□□□□□ -1.39
CTNNA1-241ENST00000524127 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-241ENST00000524127 TBX22Q9Y458 520 aa6.37□□□□□ -1.39
CTNNA1-241ENST00000524127 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-241ENST00000524127 NKTRP30414 1462 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-241ENST00000524127 NRXN1Q9ULB1 1477 aa6.36□□□□□ -1.39
CTNNA1-241ENST00000524127 DISP3Q9P2K9 1392 aa6.36□□□□□ -1.39
CTNNA1-241ENST00000524127 PLEKHH1Q9ULM0 1364 aa6.36□□□□□ -1.39
CTNNA1-241ENST00000524127 PDE3AQ14432 1141 aa6.36□□□□□ -1.39
CTNNA1-241ENST00000524127 RGL3Q3MIN7 710 aa6.36□□□□□ -1.39
CTNNA1-241ENST00000524127 CDCA8Q53HL2 280 aa6.36□□□□□ -1.39
CTNNA1-241ENST00000524127 C20orf194Q5TEA3 1177 aa6.36□□□□□ -1.39
CTNNA1-241ENST00000524127 NALCNQ8IZF0 1738 aa6.36□□□□□ -1.39
CTNNA1-241ENST00000524127 USP19O94966 1318 aa6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 E9PSI1 815 aa6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 UBAP1LF5GYI3 381 aa6.35□□□□□ -1.39
CTNNA1-241ENST00000524127 SLC24A1O60721 1099 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms