RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 ADAMTS13Q76LX8 1427 aa7.54□□□□□ -1.2
AP3B1-204ENST00000519295 IL27Q8NEV9 243 aa7.54□□□□□ -1.2
AP3B1-204ENST00000519295 RRBP1Q9P2E9 1410 aaKnown RBP7.54□□□□□ -1.2
AP3B1-204ENST00000519295 SPAG9O60271 1321 aaKnown RBP7.54□□□□□ -1.2
AP3B1-204ENST00000519295 SOCS7O14512 581 aa7.53□□□□□ -1.2
AP3B1-204ENST00000519295 VSIG10Q8N0Z9 540 aa7.53□□□□□ -1.2
AP3B1-204ENST00000519295 C11orf95C9JLR9 678 aaPredicted RBP7.53□□□□□ -1.2
AP3B1-204ENST00000519295 TMEM2Q9UHN6 1383 aa7.53□□□□□ -1.2
AP3B1-204ENST00000519295 TRPM1Q7Z4N2 1603 aa7.53□□□□□ -1.2
AP3B1-204ENST00000519295 SETD5Q9C0A6 1442 aa7.52□□□□□ -1.2
AP3B1-204ENST00000519295 AFAP1Q8N556 730 aa7.52□□□□□ -1.21
AP3B1-204ENST00000519295 KCNH8Q96L42 1107 aa7.52□□□□□ -1.21
AP3B1-204ENST00000519295 ZBTB22O15209 634 aa7.52□□□□□ -1.21
AP3B1-204ENST00000519295 THSD7AQ9UPZ6 1657 aa7.51□□□□□ -1.21
AP3B1-204ENST00000519295 ITSN1Q15811 1721 aa7.51□□□□□ -1.21
AP3B1-204ENST00000519295 CHMP4BQ9H444 224 aaKnown RBP7.51□□□□□ -1.21
AP3B1-204ENST00000519295 TNS1Q9HBL0 1735 aaKnown RBP7.5□□□□□ -1.21
AP3B1-204ENST00000519295 PSEN1P49768 467 aa7.5□□□□□ -1.21
AP3B1-204ENST00000519295 USP32Q8NFA0 1604 aa7.5□□□□□ -1.21
AP3B1-204ENST00000519295 ASXL1Q8IXJ9 1541 aa7.5□□□□□ -1.21
AP3B1-204ENST00000519295 PHRF1Q9P1Y6 1649 aaKnown RBP7.5□□□□□ -1.21
AP3B1-204ENST00000519295 MYOM2P54296 1465 aa7.49□□□□□ -1.21
AP3B1-204ENST00000519295 RGS22Q8NE09 1264 aa7.49□□□□□ -1.21
AP3B1-204ENST00000519295 ABCC6O95255 1503 aa7.49□□□□□ -1.21
AP3B1-204ENST00000519295 CNPY4Q8N129 248 aa7.49□□□□□ -1.21
AP3B1-204ENST00000519295 C1orf115Q9H7X2 142 aa7.49□□□□□ -1.21
AP3B1-204ENST00000519295 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.49□□□□□ -1.21
AP3B1-204ENST00000519295 CC2D2BQ6DHV5 1058 aa7.48□□□□□ -1.21
AP3B1-204ENST00000519295 VGFO15240 615 aaPredicted RBP7.48□□□□□ -1.21
AP3B1-204ENST00000519295 CDK11BP21127 795 aaKnown RBP7.48□□□□□ -1.21
AP3B1-204ENST00000519295 RGPD1P0DJD0 1748 aa7.47□□□□□ -1.21
AP3B1-204ENST00000519295 LRP6O75581 1613 aa7.47□□□□□ -1.21
AP3B1-204ENST00000519295 ZEB1P37275 1124 aaPredicted RBP7.47□□□□□ -1.21
AP3B1-204ENST00000519295 ZNF830Q96NB3 372 aaPredicted RBP7.46□□□□□ -1.21
AP3B1-204ENST00000519295 PEAK1Q9H792 1746 aa7.46□□□□□ -1.22
AP3B1-204ENST00000519295 CFAP44Q96MT7 982 aa7.46□□□□□ -1.22
AP3B1-204ENST00000519295 NAP1L5Q96NT1 182 aaPredicted RBP7.46□□□□□ -1.22
AP3B1-204ENST00000519295 TMEM51Q9NW97 253 aa7.45□□□□□ -1.22
AP3B1-204ENST00000519295 NRKQ7Z2Y5 1582 aa7.44□□□□□ -1.22
AP3B1-204ENST00000519295 ARHGEF28Q8N1W1 1705 aaKnown RBP7.44□□□□□ -1.22
AP3B1-204ENST00000519295 PXDNQ92626 1479 aa7.44□□□□□ -1.22
AP3B1-204ENST00000519295 LMO7Q8WWI1 1683 aa7.44□□□□□ -1.22
AP3B1-204ENST00000519295 KIF15Q9NS87 1388 aa7.43□□□□□ -1.22
AP3B1-204ENST00000519295 PARP4Q9UKK3 1724 aaKnown RBP7.43□□□□□ -1.22
AP3B1-204ENST00000519295 PHF23Q9BUL5 403 aaPredicted RBP7.43□□□□□ -1.22
AP3B1-204ENST00000519295 CERS3Q8IU89 383 aa7.43□□□□□ -1.22
AP3B1-204ENST00000519295 BORCS6Q96GS4 357 aa7.43□□□□□ -1.22
AP3B1-204ENST00000519295 FTSJ3Q8IY81 847 aaKnown RBP7.43□□□□□ -1.22
AP3B1-204ENST00000519295 PTPRUQ92729 1446 aa7.42□□□□□ -1.22
AP3B1-204ENST00000519295 ADGRB1O14514 1584 aa7.42□□□□□ -1.22
AP3B1-204ENST00000519295 WASHC2CQ9Y4E1 1318 aa7.42□□□□□ -1.22
AP3B1-204ENST00000519295 PRDM10Q9NQV6 1147 aa7.41□□□□□ -1.22
AP3B1-204ENST00000519295 AKAP12Q02952 1782 aa7.41□□□□□ -1.22
AP3B1-204ENST00000519295 ANKRD30AQ9BXX3 1397 aa7.41□□□□□ -1.22
AP3B1-204ENST00000519295 BRWD3Q6RI45 1802 aa7.41□□□□□ -1.22
AP3B1-204ENST00000519295 ZNF592Q92610 1267 aa7.41□□□□□ -1.22
AP3B1-204ENST00000519295 QRICH2Q9H0J4 1663 aa7.41□□□□□ -1.22
AP3B1-204ENST00000519295 COL14A1Q05707 1796 aaKnown RBP7.41□□□□□ -1.22
AP3B1-204ENST00000519295 CFDP1Q9UEE9 299 aaPredicted RBP7.41□□□□□ -1.22
AP3B1-204ENST00000519295 HFM1A2PYH4 1435 aa7.4□□□□□ -1.22
AP3B1-204ENST00000519295 ADGRL3Q9HAR2 1447 aa7.4□□□□□ -1.22
AP3B1-204ENST00000519295 SPATA31E1Q6ZUB1 1445 aa7.4□□□□□ -1.22
AP3B1-204ENST00000519295 CENPJQ9HC77 1338 aaPredicted RBP7.4□□□□□ -1.22
AP3B1-204ENST00000519295 THEMISQ8N1K5 641 aaPredicted RBP7.4□□□□□ -1.22
AP3B1-204ENST00000519295 SUPT16HQ9Y5B9 1047 aaKnown RBP7.4□□□□□ -1.22
AP3B1-204ENST00000519295 SGSM3Q96HU1 749 aa7.4□□□□□ -1.23
AP3B1-204ENST00000519295 CASZ1Q86V15 1759 aa7.4□□□□□ -1.23
AP3B1-204ENST00000519295 CICQ96RK0 1608 aaPredicted RBP7.39□□□□□ -1.23
AP3B1-204ENST00000519295 CLSPNQ9HAW4 1339 aa7.39□□□□□ -1.23
AP3B1-204ENST00000519295 ZNF335Q9H4Z2 1342 aaPredicted RBP7.39□□□□□ -1.23
AP3B1-204ENST00000519295 CAMTA1Q9Y6Y1 1673 aa7.39□□□□□ -1.23
AP3B1-204ENST00000519295 P3H3Q8IVL6 736 aa7.39□□□□□ -1.23
AP3B1-204ENST00000519295 NUP188Q5SRE5 1749 aa7.38□□□□□ -1.23
AP3B1-204ENST00000519295 ANKRD50Q9ULJ7 1429 aa7.38□□□□□ -1.23
AP3B1-204ENST00000519295 ZNF326Q5BKZ1 582 aaKnown RBP7.38□□□□□ -1.23
AP3B1-204ENST00000519295 COL18A1P39060 1754 aa7.38□□□□□ -1.23
AP3B1-204ENST00000519295 DISP2A7MBM2 1401 aa7.38□□□□□ -1.23
AP3B1-204ENST00000519295 ARID3AQ99856 593 aa7.38□□□□□ -1.23
AP3B1-204ENST00000519295 FANCIQ9NVI1 1328 aa7.38□□□□□ -1.23
AP3B1-204ENST00000519295 RIMS2Q9UQ26 1411 aa7.38□□□□□ -1.23
AP3B1-204ENST00000519295 KCNA6P17658 529 aa7.37□□□□□ -1.23
AP3B1-204ENST00000519295 HNRNPMP52272 730 aaKnown RBP eCLIP7.37□□□□□ -1.233e-7■■■■□ 23.4
AP3B1-204ENST00000519295 DNAJC14Q6Y2X3 702 aaPredicted RBP7.37□□□□□ -1.23
AP3B1-204ENST00000519295 ILDR2Q71H61 639 aa7.37□□□□□ -1.23
AP3B1-204ENST00000519295 GLI3P10071 1580 aa7.37□□□□□ -1.23
AP3B1-204ENST00000519295 HSPA2P54652 639 aa7.37□□□□□ -1.23
AP3B1-204ENST00000519295 WASHC2AQ641Q2 1341 aa7.37□□□□□ -1.23
AP3B1-204ENST00000519295 NCKAP5LQ9HCH0 1330 aa7.37□□□□□ -1.23
AP3B1-204ENST00000519295 ATRNO75882 1429 aa7.37□□□□□ -1.23
AP3B1-204ENST00000519295 FAM208AQ9UK61 1670 aaKnown RBP7.37□□□□□ -1.23
AP3B1-204ENST00000519295 ZNF644Q9H582 1327 aaPredicted RBP7.36□□□□□ -1.23
AP3B1-204ENST00000519295 SBF2Q86WG5 1849 aa7.36□□□□□ -1.23
AP3B1-204ENST00000519295 PIK3C2GO75747 1445 aa7.36□□□□□ -1.23
AP3B1-204ENST00000519295 ZNF831Q5JPB2 1677 aa7.36□□□□□ -1.23
AP3B1-204ENST00000519295 SPATA31A6Q5VVP1 1343 aa7.36□□□□□ -1.23
AP3B1-204ENST00000519295 SIRT1Q96EB6 747 aa7.36□□□□□ -1.23
AP3B1-204ENST00000519295 TBX22Q9Y458 520 aa7.36□□□□□ -1.23
AP3B1-204ENST00000519295 ANKRD26Q9UPS8 1709 aa7.36□□□□□ -1.23
AP3B1-204ENST00000519295 SOX12O15370 315 aa7.35□□□□□ -1.23
AP3B1-204ENST00000519295 CEBPAP49715 358 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms