RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 KCNJ4P48050 445 aa10.44□□□□□ -0.74
PCM1-212ENST00000519253 CAVIN1Q6NZI2 390 aaKnown RBP10.44□□□□□ -0.74
PCM1-212ENST00000519253 PZPP20742 1482 aa10.43□□□□□ -0.74
PCM1-212ENST00000519253 PDCL3Q9H2J4 239 aa10.43□□□□□ -0.74
PCM1-212ENST00000519253 CCDC141Q6ZP82 1450 aa10.43□□□□□ -0.74
PCM1-212ENST00000519253 GNAI1P63096 354 aa10.43□□□□□ -0.74
PCM1-212ENST00000519253 ZNF428Q96B54 188 aa10.43□□□□□ -0.74
PCM1-212ENST00000519253 PRAG1Q86YV5 1406 aa10.43□□□□□ -0.74
PCM1-212ENST00000519253 GPATCH8Q9UKJ3 1502 aaKnown RBP10.43□□□□□ -0.74
PCM1-212ENST00000519253 HMGN5P82970 282 aaKnown RBP10.43□□□□□ -0.74
PCM1-212ENST00000519253 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
PCM1-212ENST00000519253 ZBTB7CA1YPR0 619 aa10.42□□□□□ -0.74
PCM1-212ENST00000519253 CHD1LQ86WJ1 897 aa10.42□□□□□ -0.74
PCM1-212ENST00000519253 NUP160Q12769 1436 aa10.42□□□□□ -0.74
PCM1-212ENST00000519253 RTF1Q92541 710 aaKnown RBP10.42□□□□□ -0.74
PCM1-212ENST00000519253 TESK2Q96S53 571 aa10.42□□□□□ -0.74
PCM1-212ENST00000519253 OS9Q13438 667 aaPredicted RBP10.42□□□□□ -0.74
PCM1-212ENST00000519253 PLEKHH1Q9ULM0 1364 aa10.42□□□□□ -0.74
PCM1-212ENST00000519253 HTATSF1O43719 755 aaKnown RBP10.42□□□□□ -0.74
PCM1-212ENST00000519253 TRIM6-TRIM34B2RNG4 842 aa10.42□□□□□ -0.74
PCM1-212ENST00000519253 ELL2O00472 640 aaPredicted RBP10.42□□□□□ -0.74
PCM1-212ENST00000519253 FOXD4L5Q5VV16 416 aaPredicted RBP10.42□□□□□ -0.74
PCM1-212ENST00000519253 FOXD4L4Q8WXT5 416 aaPredicted RBP10.42□□□□□ -0.74
PCM1-212ENST00000519253 STK31Q9BXU1 1019 aa10.41□□□□□ -0.74
PCM1-212ENST00000519253 NOB1Q9ULX3 412 aaKnown RBP10.41□□□□□ -0.74
PCM1-212ENST00000519253 IFT140Q96RY7 1462 aa10.41□□□□□ -0.74
PCM1-212ENST00000519253 BLMP54132 1417 aaPredicted RBP10.41□□□□□ -0.74
PCM1-212ENST00000519253 MCM2P49736 904 aa10.41□□□□□ -0.74
PCM1-212ENST00000519253 TNPO1Q92973 898 aaKnown RBP10.41□□□□□ -0.74
PCM1-212ENST00000519253 CTTNBP2Q8WZ74 1663 aa10.41□□□□□ -0.74
PCM1-212ENST00000519253 MAGI1Q96QZ7 1491 aaPredicted RBP10.41□□□□□ -0.74
PCM1-212ENST00000519253 TSR2Q969E8 191 aaKnown RBP10.4□□□□□ -0.74
PCM1-212ENST00000519253 PIK3C2GO75747 1445 aa10.4□□□□□ -0.74
PCM1-212ENST00000519253 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.75
PCM1-212ENST00000519253 ARHGAP5Q13017 1502 aa10.4□□□□□ -0.75
PCM1-212ENST00000519253 CHMP4AQ9BY43 222 aa10.39□□□□□ -0.75
PCM1-212ENST00000519253 NOL8Q76FK4 1167 aaKnown RBP10.39□□□□□ -0.75
PCM1-212ENST00000519253 GCC2Q8IWJ2 1684 aa10.39□□□□□ -0.75
PCM1-212ENST00000519253 SLC12A5Q9H2X9 1139 aa10.39□□□□□ -0.75
PCM1-212ENST00000519253 KIF14Q15058 1648 aa10.39□□□□□ -0.75
PCM1-212ENST00000519253 ZMYM4Q5VZL5 1548 aa10.39□□□□□ -0.75
PCM1-212ENST00000519253 DIAPH3Q9NSV4 1193 aa10.39□□□□□ -0.75
PCM1-212ENST00000519253 SCAF11Q99590 1463 aaKnown RBP10.39□□□□□ -0.75
PCM1-212ENST00000519253 URB2Q14146 1524 aaKnown RBP10.39□□□□□ -0.75
PCM1-212ENST00000519253 RRAGDQ9NQL2 400 aaPredicted RBP10.38□□□□□ -0.75
PCM1-212ENST00000519253 TPM3P06753 285 aa10.38□□□□□ -0.75
PCM1-212ENST00000519253 HDAC1Q13547 482 aaPredicted RBP10.38□□□□□ -0.75
PCM1-212ENST00000519253 PANK2Q9BZ23 570 aa10.38□□□□□ -0.75
PCM1-212ENST00000519253 PCDHB15Q9Y5E8 787 aa10.38□□□□□ -0.75
PCM1-212ENST00000519253 LAMC3Q9Y6N6 1575 aa10.38□□□□□ -0.75
PCM1-212ENST00000519253 COL17A1Q9UMD9 1497 aaPredicted RBP10.38□□□□□ -0.75
PCM1-212ENST00000519253 RBM10P98175 930 aaKnown RBP10.38□□□□□ -0.75
PCM1-212ENST00000519253 SNX21Q969T3 373 aa10.38□□□□□ -0.75
PCM1-212ENST00000519253 ZMYND15Q9H091 742 aa10.38□□□□□ -0.75
PCM1-212ENST00000519253 FGD1P98174 961 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 DNMT1P26358 1616 aaKnown RBP10.37□□□□□ -0.75
PCM1-212ENST00000519253 ABCC11Q96J66 1382 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 KLHL40Q2TBA0 621 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 BMP2KLQ5H9B9 411 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 SLC4A10Q6U841 1118 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 TSPY26PQ9H489 355 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 MCM5P33992 734 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 RNF214Q8ND24 703 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 PLB1Q6P1J6 1458 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 LETM1O95202 739 aaPredicted RBP10.37□□□□□ -0.75
PCM1-212ENST00000519253 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
PCM1-212ENST00000519253 NUP153P49790 1475 aaKnown RBP10.37□□□□□ -0.75
PCM1-212ENST00000519253 TMEM57Q8N5G2 664 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 ADGRL2O95490 1459 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 ASXL1Q8IXJ9 1541 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 UQCRHLA0A096LP55 91 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 SEC24BO95487 1268 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 UQCRHP07919 91 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 GGNBP2Q9H3C7 697 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 NPC1L1Q9UHC9 1359 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 SSH1Q8WYL5 1049 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 SAMD9Q5K651 1589 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 NSD3Q9BZ95 1437 aa10.36□□□□□ -0.75
PCM1-212ENST00000519253 ALDH1L2Q3SY69 923 aa10.35□□□□□ -0.75
PCM1-212ENST00000519253 ANO2Q9NQ90 1003 aa10.35□□□□□ -0.75
PCM1-212ENST00000519253 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
PCM1-212ENST00000519253 WDR62O43379 1518 aa10.35□□□□□ -0.75
PCM1-212ENST00000519253 CCDC27Q2M243 656 aa10.35□□□□□ -0.75
PCM1-212ENST00000519253 RILPL2Q969X0 211 aa10.35□□□□□ -0.75
PCM1-212ENST00000519253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.35□□□□□ -0.752e-7■■■□□ 16.9
PCM1-212ENST00000519253 TMPOP42166 694 aaKnown RBP10.35□□□□□ -0.75
PCM1-212ENST00000519253 FAM184AQ8NB25 1140 aa10.35□□□□□ -0.75
PCM1-212ENST00000519253 SHANK2Q9UPX8 1470 aa10.35□□□□□ -0.75
PCM1-212ENST00000519253 SMC5Q8IY18 1101 aa10.34□□□□□ -0.75
PCM1-212ENST00000519253 POLR3AO14802 1390 aaPredicted RBP10.34□□□□□ -0.75
PCM1-212ENST00000519253 TRIM27P14373 513 aa10.34□□□□□ -0.75
PCM1-212ENST00000519253 HDGFP51858 240 aaKnown RBP10.34□□□□□ -0.75
PCM1-212ENST00000519253 NEK4P51957 841 aa10.34□□□□□ -0.75
PCM1-212ENST00000519253 FOXD4L6Q3SYB3 417 aaPredicted RBP10.33□□□□□ -0.75
PCM1-212ENST00000519253 HS1BP3Q53T59 392 aa10.33□□□□□ -0.75
PCM1-212ENST00000519253 FOXD4L3Q6VB84 417 aaPredicted RBP10.33□□□□□ -0.75
PCM1-212ENST00000519253 GPATCH3Q96I76 525 aa10.33□□□□□ -0.75
PCM1-212ENST00000519253 SSFA2P28290 1259 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms