RNA–Protein interactions for RNA: ENST00000517443.1

IGKV2-38-201, Transcript of immunoglobulin kappa variable 2-38 (pseudogene), humanhuman

BASIC

Gene IGKV2-38, Length 247 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-38-201ENST00000517443 TOP2BQ02880 1626 aa6.36□□□□□ -1.39
IGKV2-38-201ENST00000517443 FANCD2Q9BXW9 1451 aa6.36□□□□□ -1.39
IGKV2-38-201ENST00000517443 CEP162Q5TB80 1403 aa6.36□□□□□ -1.39
IGKV2-38-201ENST00000517443 CFHP08603 1231 aa6.36□□□□□ -1.39
IGKV2-38-201ENST00000517443 SLC6A16Q9GZN6 736 aa6.36□□□□□ -1.39
IGKV2-38-201ENST00000517443 ARAP1Q96P48 1450 aa6.35□□□□□ -1.39
IGKV2-38-201ENST00000517443 AXIN1O15169 862 aa6.35□□□□□ -1.39
IGKV2-38-201ENST00000517443 INSM1Q01101 510 aaPredicted RBP6.35□□□□□ -1.39
IGKV2-38-201ENST00000517443 TMEM134Q9H6X4 195 aa6.35□□□□□ -1.39
IGKV2-38-201ENST00000517443 ZEB1P37275 1124 aaPredicted RBP6.34□□□□□ -1.39
IGKV2-38-201ENST00000517443 SMCPP49901 116 aaPredicted RBP6.34□□□□□ -1.39
IGKV2-38-201ENST00000517443 FAM161AQ3B820 660 aa6.34□□□□□ -1.39
IGKV2-38-201ENST00000517443 KIF21BO75037 1637 aa6.34□□□□□ -1.39
IGKV2-38-201ENST00000517443 BIVM-ERCC5R4GMW8 1640 aa6.33□□□□□ -1.4
IGKV2-38-201ENST00000517443 LMOD2Q6P5Q4 547 aa6.33□□□□□ -1.4
IGKV2-38-201ENST00000517443 EIF4G3O43432 1585 aaKnown RBP6.32□□□□□ -1.4
IGKV2-38-201ENST00000517443 TERTO14746 1132 aaKnown RBP6.32□□□□□ -1.4
IGKV2-38-201ENST00000517443 DNAJB2P25686 324 aa6.32□□□□□ -1.4
IGKV2-38-201ENST00000517443 E2F4Q16254 413 aa6.32□□□□□ -1.4
IGKV2-38-201ENST00000517443 PUS10Q3MIT2 529 aaKnown RBP6.32□□□□□ -1.4
IGKV2-38-201ENST00000517443 KIF27Q86VH2 1401 aa6.32□□□□□ -1.4
IGKV2-38-201ENST00000517443 PRDM2Q13029 1718 aa6.31□□□□□ -1.4
IGKV2-38-201ENST00000517443 CTC1Q2NKJ3 1217 aa6.31□□□□□ -1.4
IGKV2-38-201ENST00000517443 SCUBE3Q8IX30 993 aa6.31□□□□□ -1.4
IGKV2-38-201ENST00000517443 ADGRG1Q9Y653 693 aa6.31□□□□□ -1.4
IGKV2-38-201ENST00000517443 CUX1P39880 1505 aa6.3□□□□□ -1.4
IGKV2-38-201ENST00000517443 RCCD1A6NED2 376 aa6.3□□□□□ -1.4
IGKV2-38-201ENST00000517443 KMT5BQ4FZB7 885 aa6.3□□□□□ -1.4
IGKV2-38-201ENST00000517443 ATP13A2Q9NQ11 1180 aa6.3□□□□□ -1.4
IGKV2-38-201ENST00000517443 FCF1Q9Y324 198 aaKnown RBP6.3□□□□□ -1.4
IGKV2-38-201ENST00000517443 CLIP1P30622 1438 aa6.3□□□□□ -1.4
IGKV2-38-201ENST00000517443 AQRO60306 1485 aaKnown RBP eCLIP6.29□□□□□ -1.4
IGKV2-38-201ENST00000517443 PRXQ9BXM0 1461 aa6.29□□□□□ -1.4
IGKV2-38-201ENST00000517443 SMPD1P17405 629 aa6.29□□□□□ -1.4
IGKV2-38-201ENST00000517443 SLC4A3P48751 1232 aa6.29□□□□□ -1.4
IGKV2-38-201ENST00000517443 PRDM9Q9NQV7 894 aa6.29□□□□□ -1.4
IGKV2-38-201ENST00000517443 ERICH3Q5RHP9 1530 aa6.29□□□□□ -1.4
IGKV2-38-201ENST00000517443 RAPGEF2Q9Y4G8 1499 aa6.28□□□□□ -1.4
IGKV2-38-201ENST00000517443 NR1I2O75469 434 aa6.28□□□□□ -1.4
IGKV2-38-201ENST00000517443 RPIAP49247 311 aa6.28□□□□□ -1.4
IGKV2-38-201ENST00000517443 CYP4X1Q8N118 509 aa6.28□□□□□ -1.4
IGKV2-38-201ENST00000517443 TRIM47Q96LD4 638 aa6.28□□□□□ -1.4
IGKV2-38-201ENST00000517443 SPSB2Q99619 263 aa6.28□□□□□ -1.4
IGKV2-38-201ENST00000517443 MLLT3P42568 568 aaPredicted RBP6.27□□□□□ -1.41
IGKV2-38-201ENST00000517443 PTGDRQ13258 359 aa6.27□□□□□ -1.41
IGKV2-38-201ENST00000517443 THAP11Q96EK4 314 aa6.27□□□□□ -1.41
IGKV2-38-201ENST00000517443 PPARGC1BQ86YN6 1023 aaKnown RBP6.26□□□□□ -1.41
IGKV2-38-201ENST00000517443 FAM160A2Q8N612 972 aaPredicted RBP6.26□□□□□ -1.41
IGKV2-38-201ENST00000517443 VPS8Q8N3P4 1428 aa6.25□□□□□ -1.41
IGKV2-38-201ENST00000517443 J3QL48 77 aa6.25□□□□□ -1.41
IGKV2-38-201ENST00000517443 ERCC6L2Q5T890 1561 aa6.25□□□□□ -1.41
IGKV2-38-201ENST00000517443 IGF1RP08069 1367 aa6.24□□□□□ -1.41
IGKV2-38-201ENST00000517443 GMPRP36959 345 aa6.24□□□□□ -1.41
IGKV2-38-201ENST00000517443 RBM46Q8TBY0 533 aaKnown RBP6.24□□□□□ -1.41
IGKV2-38-201ENST00000517443 TARBP1Q13395 1621 aaKnown RBP6.24□□□□□ -1.41
IGKV2-38-201ENST00000517443 TOPBP1Q92547 1522 aa6.24□□□□□ -1.41
IGKV2-38-201ENST00000517443 FGD5Q6ZNL6 1462 aa6.23□□□□□ -1.41
IGKV2-38-201ENST00000517443 KIF13AQ9H1H9 1805 aa6.23□□□□□ -1.41
IGKV2-38-201ENST00000517443 SUZ12Q15022 739 aaKnown RBP6.23□□□□□ -1.41
IGKV2-38-201ENST00000517443 HPS1Q92902 700 aa6.23□□□□□ -1.41
IGKV2-38-201ENST00000517443 RAD54L2Q9Y4B4 1467 aa6.22□□□□□ -1.41
IGKV2-38-201ENST00000517443 TTC24A2A3L6 582 aaPredicted RBP6.22□□□□□ -1.41
IGKV2-38-201ENST00000517443 MORN1Q5T089 497 aa6.22□□□□□ -1.41
IGKV2-38-201ENST00000517443 DNMBPQ6XZF7 1577 aa6.22□□□□□ -1.41
IGKV2-38-201ENST00000517443 CARMIL1Q5VZK9 1371 aa6.21□□□□□ -1.41
IGKV2-38-201ENST00000517443 WNT7AO00755 349 aa6.2□□□□□ -1.42
IGKV2-38-201ENST00000517443 CD2BP2O95400 341 aaKnown RBP6.2□□□□□ -1.42
IGKV2-38-201ENST00000517443 MRGPRX2Q96LB1 330 aa6.2□□□□□ -1.42
IGKV2-38-201ENST00000517443 IFT140Q96RY7 1462 aa6.2□□□□□ -1.42
IGKV2-38-201ENST00000517443 ERBB4Q15303 1308 aa6.2□□□□□ -1.42
IGKV2-38-201ENST00000517443 CLASP1Q7Z460 1538 aa6.2□□□□□ -1.42
IGKV2-38-201ENST00000517443 ABCA10Q8WWZ4 1543 aa6.2□□□□□ -1.42
IGKV2-38-201ENST00000517443 TSPOAP1O95153 1857 aa6.19□□□□□ -1.42
IGKV2-38-201ENST00000517443 VEGFBP49765 207 aa6.19□□□□□ -1.42
IGKV2-38-201ENST00000517443 ZSCAN1Q8NBB4 408 aa6.19□□□□□ -1.42
IGKV2-38-201ENST00000517443 SNIP1Q8TAD8 396 aaKnown RBP6.19□□□□□ -1.42
IGKV2-38-201ENST00000517443 CCER1Q8TC90 406 aaPredicted RBP6.19□□□□□ -1.42
IGKV2-38-201ENST00000517443 PXYLP1Q8TE99 480 aa6.19□□□□□ -1.42
IGKV2-38-201ENST00000517443 TDRD9Q8NDG6 1382 aaKnown RBP6.18□□□□□ -1.42
IGKV2-38-201ENST00000517443 POLA1P09884 1462 aaPredicted RBP6.18□□□□□ -1.42
IGKV2-38-201ENST00000517443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.18□□□□□ -1.42
IGKV2-38-201ENST00000517443 RANGAP1P46060 587 aaPredicted RBP6.18□□□□□ -1.42
IGKV2-38-201ENST00000517443 FUT2Q10981 343 aa6.18□□□□□ -1.42
IGKV2-38-201ENST00000517443 RNF19BQ6ZMZ0 732 aa6.18□□□□□ -1.42
IGKV2-38-201ENST00000517443 SENP2Q9HC62 589 aa6.18□□□□□ -1.42
IGKV2-38-201ENST00000517443 SLC27A5Q9Y2P5 690 aa6.18□□□□□ -1.42
IGKV2-38-201ENST00000517443 TTBK1Q5TCY1 1321 aaPredicted RBP6.18□□□□□ -1.42
IGKV2-38-201ENST00000517443 PBRM1Q86U86 1689 aa6.17□□□□□ -1.42
IGKV2-38-201ENST00000517443 SNAPC4Q5SXM2 1469 aa6.17□□□□□ -1.42
IGKV2-38-201ENST00000517443 GSK3AP49840 483 aa6.17□□□□□ -1.42
IGKV2-38-201ENST00000517443 TRIM32Q13049 653 aa6.17□□□□□ -1.42
IGKV2-38-201ENST00000517443 NXF1Q9UBU9 619 aaKnown RBP6.17□□□□□ -1.42
IGKV2-38-201ENST00000517443 BMP1P13497 986 aa6.16□□□□□ -1.42
IGKV2-38-201ENST00000517443 ARHGAP35Q9NRY4 1499 aa6.15□□□□□ -1.42
IGKV2-38-201ENST00000517443 SKOR1P84550 965 aa6.15□□□□□ -1.42
IGKV2-38-201ENST00000517443 BRICD5Q6PL45 260 aa6.15□□□□□ -1.42
IGKV2-38-201ENST00000517443 TRIM46Q7Z4K8 759 aa6.15□□□□□ -1.42
IGKV2-38-201ENST00000517443 METTL3Q86U44 580 aaKnown RBP6.14□□□□□ -1.43
IGKV2-38-201ENST00000517443 NLRP7Q8WX94 980 aa6.14□□□□□ -1.43
IGKV2-38-201ENST00000517443 BBXQ8WY36 941 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms