RNA–Protein interactions for RNA: ENST00000517443.1

IGKV2-38-201, Transcript of immunoglobulin kappa variable 2-38 (pseudogene), humanhuman

BASIC

Gene IGKV2-38, Length 247 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-38-201ENST00000517443 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
IGKV2-38-201ENST00000517443 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
IGKV2-38-201ENST00000517443 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
IGKV2-38-201ENST00000517443 PHF23Q9BUL5 403 aaPredicted RBP15.33■□□□□ 0.04
IGKV2-38-201ENST00000517443 FOXD1Q16676 465 aa14.65□□□□□ -0.06
IGKV2-38-201ENST00000517443 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
IGKV2-38-201ENST00000517443 MSH5O43196 834 aa13.71□□□□□ -0.21
IGKV2-38-201ENST00000517443 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
IGKV2-38-201ENST00000517443 PPP6R1Q9UPN7 881 aa13.45□□□□□ -0.26
IGKV2-38-201ENST00000517443 ADRA2BP18089 450 aa13.32□□□□□ -0.28
IGKV2-38-201ENST00000517443 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
IGKV2-38-201ENST00000517443 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
IGKV2-38-201ENST00000517443 DMRT2Q9Y5R5 561 aa12.3□□□□□ -0.44
IGKV2-38-201ENST00000517443 CACNB1Q02641 598 aaPredicted RBP12.03□□□□□ -0.48
IGKV2-38-201ENST00000517443 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
IGKV2-38-201ENST00000517443 DCAF8L1A6NGE4 600 aa11.75□□□□□ -0.53
IGKV2-38-201ENST00000517443 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
IGKV2-38-201ENST00000517443 HOXD11P31277 338 aaPredicted RBP11.7□□□□□ -0.54
IGKV2-38-201ENST00000517443 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
IGKV2-38-201ENST00000517443 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
IGKV2-38-201ENST00000517443 RNF216Q9NWF9 866 aaPredicted RBP11.46□□□□□ -0.57
IGKV2-38-201ENST00000517443 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
IGKV2-38-201ENST00000517443 DNAJC5BQ9UF47 199 aa11.28□□□□□ -0.6
IGKV2-38-201ENST00000517443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
IGKV2-38-201ENST00000517443 POTEHQ6S545 545 aa11.01□□□□□ -0.65
IGKV2-38-201ENST00000517443 NPM3O75607 178 aaKnown RBP10.93□□□□□ -0.66
IGKV2-38-201ENST00000517443 U3KPZ7 1027 aaPredicted RBP10.91□□□□□ -0.66
IGKV2-38-201ENST00000517443 SPINK5Q9NQ38 1064 aaPredicted RBP10.9□□□□□ -0.66
IGKV2-38-201ENST00000517443 DSG3P32926 999 aa10.89□□□□□ -0.67
IGKV2-38-201ENST00000517443 NCBP3Q53F19 620 aaKnown RBP10.89□□□□□ -0.67
IGKV2-38-201ENST00000517443 CAPN15O75808 1086 aa10.77□□□□□ -0.69
IGKV2-38-201ENST00000517443 SLC4A2P04920 1241 aa10.6□□□□□ -0.71
IGKV2-38-201ENST00000517443 ABCB7O75027 752 aa10.57□□□□□ -0.72
IGKV2-38-201ENST00000517443 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
IGKV2-38-201ENST00000517443 ZNF219Q9P2Y4 722 aaPredicted RBP10.42□□□□□ -0.74
IGKV2-38-201ENST00000517443 KCNA4P22459 653 aa10.39□□□□□ -0.75
IGKV2-38-201ENST00000517443 APLP2Q06481 763 aa10.28□□□□□ -0.76
IGKV2-38-201ENST00000517443 CHRDL2Q6WN34 429 aa10.28□□□□□ -0.76
IGKV2-38-201ENST00000517443 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
IGKV2-38-201ENST00000517443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.23□□□□□ -0.77
IGKV2-38-201ENST00000517443 HNRNPUL2Q1KMD3 747 aaKnown RBP10.23□□□□□ -0.77
IGKV2-38-201ENST00000517443 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.77
IGKV2-38-201ENST00000517443 POLA2Q14181 598 aa10.15□□□□□ -0.78
IGKV2-38-201ENST00000517443 SP7Q8TDD2 431 aaPredicted RBP10.12□□□□□ -0.79
IGKV2-38-201ENST00000517443 MYCNP04198 464 aaPredicted RBP10.02□□□□□ -0.81
IGKV2-38-201ENST00000517443 ATF5Q9Y2D1 282 aaPredicted RBP10.01□□□□□ -0.81
IGKV2-38-201ENST00000517443 PIP4P2Q8N4L2 257 aa9.99□□□□□ -0.81
IGKV2-38-201ENST00000517443 AKT1S1Q96B36 256 aa9.97□□□□□ -0.81
IGKV2-38-201ENST00000517443 REM2Q8IYK8 340 aaPredicted RBP9.94□□□□□ -0.82
IGKV2-38-201ENST00000517443 OSCARQ8IYS5 282 aa9.91□□□□□ -0.82
IGKV2-38-201ENST00000517443 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
IGKV2-38-201ENST00000517443 EVX2Q03828 476 aa9.87□□□□□ -0.83
IGKV2-38-201ENST00000517443 FXR2P51116 673 aaKnown RBP eCLIP9.85□□□□□ -0.83
IGKV2-38-201ENST00000517443 HAX1O00165 279 aa9.83□□□□□ -0.84
IGKV2-38-201ENST00000517443 ZBTB12Q9Y330 459 aaPredicted RBP9.77□□□□□ -0.85
IGKV2-38-201ENST00000517443 FOXD4L1Q9NU39 408 aa9.73□□□□□ -0.85
IGKV2-38-201ENST00000517443 ZBTB22O15209 634 aa9.63□□□□□ -0.87
IGKV2-38-201ENST00000517443 SLC4A1APQ9BWU0 796 aaKnown RBP9.62□□□□□ -0.87
IGKV2-38-201ENST00000517443 PRKAR2AP13861 404 aaKnown RBP9.57□□□□□ -0.88
IGKV2-38-201ENST00000517443 C19orf67A6NJJ6 358 aa9.55□□□□□ -0.88
IGKV2-38-201ENST00000517443 SPDYE2BA6NHP3 402 aa9.52□□□□□ -0.89
IGKV2-38-201ENST00000517443 SPDYE6P0CI01 402 aa9.52□□□□□ -0.89
IGKV2-38-201ENST00000517443 SPDYE2Q495Y8 402 aa9.52□□□□□ -0.89
IGKV2-38-201ENST00000517443 GABBR2O75899 941 aa9.51□□□□□ -0.89
IGKV2-38-201ENST00000517443 MKRN4PQ13434 485 aaPredicted RBP9.51□□□□□ -0.89
IGKV2-38-201ENST00000517443 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
IGKV2-38-201ENST00000517443 LHX8Q68G74 356 aa9.47□□□□□ -0.89
IGKV2-38-201ENST00000517443 CHADLQ6NUI6 762 aa9.45□□□□□ -0.9
IGKV2-38-201ENST00000517443 SSUH2Q9Y2M2 353 aa9.44□□□□□ -0.9
IGKV2-38-201ENST00000517443 SPDYE1Q8NFV5 336 aaPredicted RBP9.43□□□□□ -0.9
IGKV2-38-201ENST00000517443 POTEIP0CG38 1075 aa9.41□□□□□ -0.9
IGKV2-38-201ENST00000517443 ATXN8OSP0DMR3 200 aa9.4□□□□□ -0.9
IGKV2-38-201ENST00000517443 FBLN2P98095 1184 aa9.38□□□□□ -0.91
IGKV2-38-201ENST00000517443 ZNF692Q9BU19 519 aaPredicted RBP9.35□□□□□ -0.91
IGKV2-38-201ENST00000517443 PABPN1Q86U42 306 aaKnown RBP eCLIP9.24□□□□□ -0.93
IGKV2-38-201ENST00000517443 PRR29P0C7W0 189 aa9.23□□□□□ -0.93
IGKV2-38-201ENST00000517443 CD44P16070 742 aaKnown RBP9.23□□□□□ -0.93
IGKV2-38-201ENST00000517443 FARP1Q9Y4F1 1045 aaPredicted RBP9.19□□□□□ -0.94
IGKV2-38-201ENST00000517443 PLSCR2Q9NRY7 297 aa9.18□□□□□ -0.94
IGKV2-38-201ENST00000517443 POTEB2H3BUK9 544 aa9.11□□□□□ -0.95
IGKV2-38-201ENST00000517443 ZNF579Q8NAF0 562 aaKnown RBP9.08□□□□□ -0.96
IGKV2-38-201ENST00000517443 OTUD5Q96G74 571 aa9.08□□□□□ -0.96
IGKV2-38-201ENST00000517443 GALR2O43603 387 aaPredicted RBP9.07□□□□□ -0.96
IGKV2-38-201ENST00000517443 DCBLD2Q96PD2 775 aa9.06□□□□□ -0.96
IGKV2-38-201ENST00000517443 CREBZFQ9NS37 354 aa9.03□□□□□ -0.96
IGKV2-38-201ENST00000517443 ZRANB1Q9UGI0 708 aa9.03□□□□□ -0.96
IGKV2-38-201ENST00000517443 CLCN6P51797 869 aa9.01□□□□□ -0.97
IGKV2-38-201ENST00000517443 PELP1Q8IZL8 1130 aaKnown RBP8.97□□□□□ -0.97
IGKV2-38-201ENST00000517443 POTEMA6NI47 508 aa8.96□□□□□ -0.98
IGKV2-38-201ENST00000517443 PHF12Q96QT6 1004 aa8.95□□□□□ -0.98
IGKV2-38-201ENST00000517443 POTEJP0CG39 1038 aa8.92□□□□□ -0.98
IGKV2-38-201ENST00000517443 POTEGQ6S5H5 508 aa8.92□□□□□ -0.98
IGKV2-38-201ENST00000517443 LCE2DQ5TA82 110 aaPredicted RBP8.89□□□□□ -0.99
IGKV2-38-201ENST00000517443 MNX1P50219 401 aaPredicted RBP8.87□□□□□ -0.99
IGKV2-38-201ENST00000517443 MS4A3Q96HJ5 214 aa8.81□□□□□ -1
IGKV2-38-201ENST00000517443 ASTLQ6HA08 431 aaPredicted RBP8.8□□□□□ -1
IGKV2-38-201ENST00000517443 METRNQ9UJH8 293 aa8.8□□□□□ -1
IGKV2-38-201ENST00000517443 ATMINO43313 823 aaPredicted RBP8.78□□□□□ -1
IGKV2-38-201ENST00000517443 NISCHQ9Y2I1 1504 aa8.77□□□□□ -1.01
IGKV2-38-201ENST00000517443 STAG3Q9UJ98 1225 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms