RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 PLA2R1Q13018 1463 aa13.18□□□□□ -0.3
ARHGEF28-206ENST00000504003 SPOCK2Q92563 424 aa13.18□□□□□ -0.3
ARHGEF28-206ENST00000504003 CLTCL1P53675 1640 aa13.17□□□□□ -0.3
ARHGEF28-206ENST00000504003 NEURL4Q96JN8 1562 aa13.17□□□□□ -0.3
ARHGEF28-206ENST00000504003 CHGAP10645 457 aaKnown RBP13.17□□□□□ -0.3
ARHGEF28-206ENST00000504003 ZNF326Q5BKZ1 582 aaKnown RBP13.16□□□□□ -0.3
ARHGEF28-206ENST00000504003 TNRQ92752 1358 aa13.16□□□□□ -0.3
ARHGEF28-206ENST00000504003 PIK3C2BO00750 1634 aa13.15□□□□□ -0.3
ARHGEF28-206ENST00000504003 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
ARHGEF28-206ENST00000504003 RGL3Q3MIN7 710 aa13.15□□□□□ -0.3
ARHGEF28-206ENST00000504003 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF28-206ENST00000504003 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF28-206ENST00000504003 SYNMO15061 1565 aa13.15□□□□□ -0.3
ARHGEF28-206ENST00000504003 RPGRIP1LQ68CZ1 1315 aa13.14□□□□□ -0.31
ARHGEF28-206ENST00000504003 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
ARHGEF28-206ENST00000504003 NLRP1Q9C000 1473 aa13.14□□□□□ -0.31
ARHGEF28-206ENST00000504003 IDI1Q13907 227 aa13.13□□□□□ -0.31
ARHGEF28-206ENST00000504003 L3MBTL2Q969R5 705 aa13.13□□□□□ -0.31
ARHGEF28-206ENST00000504003 CEBPAP49715 358 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF28-206ENST00000504003 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF28-206ENST00000504003 DCAF11Q8TEB1 546 aa13.12□□□□□ -0.31
ARHGEF28-206ENST00000504003 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF28-206ENST00000504003 KDM5AP29375 1690 aaKnown RBP13.12□□□□□ -0.31
ARHGEF28-206ENST00000504003 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
ARHGEF28-206ENST00000504003 PPP1R15AO75807 674 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF28-206ENST00000504003 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
ARHGEF28-206ENST00000504003 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
ARHGEF28-206ENST00000504003 PTPRMP28827 1452 aa13.1□□□□□ -0.31
ARHGEF28-206ENST00000504003 ADGRB3O60242 1522 aa13.1□□□□□ -0.31
ARHGEF28-206ENST00000504003 PSEN1P49768 467 aa13.1□□□□□ -0.31
ARHGEF28-206ENST00000504003 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
ARHGEF28-206ENST00000504003 VGFO15240 615 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF28-206ENST00000504003 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.09□□□□□ -0.31
ARHGEF28-206ENST00000504003 FBXO41Q8TF61 875 aa13.09□□□□□ -0.31
ARHGEF28-206ENST00000504003 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF28-206ENST00000504003 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
ARHGEF28-206ENST00000504003 TMEM131LA2VDJ0 1609 aa13.08□□□□□ -0.32
ARHGEF28-206ENST00000504003 PDAP1Q13442 181 aaKnown RBP13.07□□□□□ -0.32
ARHGEF28-206ENST00000504003 MYO3AQ8NEV4 1616 aa13.06□□□□□ -0.32
ARHGEF28-206ENST00000504003 A2ML1A8K2U0 1454 aa13.06□□□□□ -0.32
ARHGEF28-206ENST00000504003 UHRF1BP1Q6BDS2 1440 aa13.05□□□□□ -0.32
ARHGEF28-206ENST00000504003 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF28-206ENST00000504003 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
ARHGEF28-206ENST00000504003 UBR1Q8IWV7 1749 aa13.05□□□□□ -0.32
ARHGEF28-206ENST00000504003 PPLO60437 1756 aa13.04□□□□□ -0.32
ARHGEF28-206ENST00000504003 MYOM2P54296 1465 aa13.04□□□□□ -0.32
ARHGEF28-206ENST00000504003 MYO5BQ9ULV0 1848 aa13.04□□□□□ -0.32
ARHGEF28-206ENST00000504003 SNPHO15079 494 aa13.04□□□□□ -0.32
ARHGEF28-206ENST00000504003 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
ARHGEF28-206ENST00000504003 IFT172Q9UG01 1749 aa13.04□□□□□ -0.32
ARHGEF28-206ENST00000504003 CEP170BQ9Y4F5 1589 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF28-206ENST00000504003 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
ARHGEF28-206ENST00000504003 ZNF142P52746 1687 aaPredicted RBP13.02□□□□□ -0.32
ARHGEF28-206ENST00000504003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.02□□□□□ -0.334e-9■■□□□ 13.5
ARHGEF28-206ENST00000504003 ZFYVE9O95405 1425 aa13.02□□□□□ -0.33
ARHGEF28-206ENST00000504003 PRAG1Q86YV5 1406 aa13.01□□□□□ -0.33
ARHGEF28-206ENST00000504003 RIMS2Q9UQ26 1411 aa13.01□□□□□ -0.33
ARHGEF28-206ENST00000504003 NEXMIFQ5QGS0 1516 aa13.01□□□□□ -0.33
ARHGEF28-206ENST00000504003 TMEM2Q9UHN6 1383 aa13□□□□□ -0.33
ARHGEF28-206ENST00000504003 ST18O60284 1047 aa13□□□□□ -0.33
ARHGEF28-206ENST00000504003 BCANQ96GW7 911 aa13□□□□□ -0.33
ARHGEF28-206ENST00000504003 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
ARHGEF28-206ENST00000504003 ROCK2O75116 1388 aaKnown RBP12.99□□□□□ -0.33
ARHGEF28-206ENST00000504003 LAMC1P11047 1609 aa12.99□□□□□ -0.33
ARHGEF28-206ENST00000504003 TXNDC2Q86VQ3 553 aa12.98□□□□□ -0.33
ARHGEF28-206ENST00000504003 ANKLE2Q86XL3 938 aa12.98□□□□□ -0.33
ARHGEF28-206ENST00000504003 SLIT1O75093 1534 aa12.98□□□□□ -0.33
ARHGEF28-206ENST00000504003 RALGAPBQ86X10 1494 aa12.97□□□□□ -0.33
ARHGEF28-206ENST00000504003 NBPF8Q3BBV2 869 aa12.97□□□□□ -0.33
ARHGEF28-206ENST00000504003 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
ARHGEF28-206ENST00000504003 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
ARHGEF28-206ENST00000504003 NRXN1Q9ULB1 1477 aa12.97□□□□□ -0.33
ARHGEF28-206ENST00000504003 ADGRF5Q8IZF2 1346 aa12.96□□□□□ -0.33
ARHGEF28-206ENST00000504003 EIF4G2P78344 907 aaKnown RBP eCLIP12.96□□□□□ -0.33
ARHGEF28-206ENST00000504003 TMEM121BQ9BXQ6 578 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF28-206ENST00000504003 PIK3C2GO75747 1445 aa12.96□□□□□ -0.34
ARHGEF28-206ENST00000504003 NUTM2DQ5VT03 806 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF28-206ENST00000504003 CABP2Q9NPB3 220 aa12.95□□□□□ -0.34
ARHGEF28-206ENST00000504003 ARHGAP23Q9P227 1491 aa12.95□□□□□ -0.34
ARHGEF28-206ENST00000504003 SCAF11Q99590 1463 aaKnown RBP12.94□□□□□ -0.34
ARHGEF28-206ENST00000504003 G3V3G9 751 aa12.94□□□□□ -0.34
ARHGEF28-206ENST00000504003 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
ARHGEF28-206ENST00000504003 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
ARHGEF28-206ENST00000504003 C14orf93Q9H972 538 aaKnown RBP12.94□□□□□ -0.34
ARHGEF28-206ENST00000504003 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
ARHGEF28-206ENST00000504003 PLEKHG1Q9ULL1 1385 aa12.94□□□□□ -0.34
ARHGEF28-206ENST00000504003 LMTK3Q96Q04 1460 aa12.93□□□□□ -0.34
ARHGEF28-206ENST00000504003 SETBP1Q9Y6X0 1596 aa12.93□□□□□ -0.34
ARHGEF28-206ENST00000504003 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
ARHGEF28-206ENST00000504003 GPRASP1Q5JY77 1395 aa12.91□□□□□ -0.34
ARHGEF28-206ENST00000504003 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF28-206ENST00000504003 DIP2AQ14689 1571 aa12.9□□□□□ -0.35
ARHGEF28-206ENST00000504003 ALKQ9UM73 1620 aa12.89□□□□□ -0.35
ARHGEF28-206ENST00000504003 LTKP29376 864 aa12.89□□□□□ -0.35
ARHGEF28-206ENST00000504003 USP47Q96K76 1375 aa12.89□□□□□ -0.35
ARHGEF28-206ENST00000504003 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF28-206ENST00000504003 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
ARHGEF28-206ENST00000504003 IQGAP1P46940 1657 aa12.87□□□□□ -0.35
ARHGEF28-206ENST00000504003 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
ARHGEF28-206ENST00000504003 HSPA5P11021 654 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms