RNA–Protein interactions for RNA: ENST00000495537.1

KCTD3-205, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 1 (best)

Gene KCTD3, Length 2,722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-205ENST00000495537 AAMPQ13685 434 aa4.44□□□□□ -1.7
KCTD3-205ENST00000495537 NUTM2FA1L443 756 aa4.44□□□□□ -1.7
KCTD3-205ENST00000495537 RRP9O43818 475 aaKnown RBP4.44□□□□□ -1.7
KCTD3-205ENST00000495537 FCHSD2O94868 740 aa4.44□□□□□ -1.7
KCTD3-205ENST00000495537 OATP04181 439 aa4.44□□□□□ -1.7
KCTD3-205ENST00000495537 ANP32AP39687 249 aaKnown RBP4.44□□□□□ -1.7
KCTD3-205ENST00000495537 LMOD2Q6P5Q4 547 aa4.44□□□□□ -1.7
KCTD3-205ENST00000495537 MLLT3P42568 568 aaPredicted RBP4.43□□□□□ -1.7
KCTD3-205ENST00000495537 ZNF697Q5TEC3 545 aa4.43□□□□□ -1.7
KCTD3-205ENST00000495537 P3H3Q8IVL6 736 aa4.43□□□□□ -1.7
KCTD3-205ENST00000495537 TIMELESSQ9UNS1 1208 aa4.43□□□□□ -1.7
KCTD3-205ENST00000495537 S1PR4O95977 384 aa4.43□□□□□ -1.7
KCTD3-205ENST00000495537 TRIM67Q6ZTA4 783 aa4.43□□□□□ -1.7
KCTD3-205ENST00000495537 TRIM52Q96A61 297 aa4.43□□□□□ -1.7
KCTD3-205ENST00000495537 SLC6A16Q9GZN6 736 aa4.43□□□□□ -1.7
KCTD3-205ENST00000495537 TLL1O43897 1013 aa4.42□□□□□ -1.7
KCTD3-205ENST00000495537 ZNF775Q96BV0 537 aaPredicted RBP4.42□□□□□ -1.7
KCTD3-205ENST00000495537 PPM1GO15355 546 aaPredicted RBP4.42□□□□□ -1.7
KCTD3-205ENST00000495537 NEFMP07197 916 aa4.42□□□□□ -1.7
KCTD3-205ENST00000495537 PEG3Q9GZU2 1588 aa4.42□□□□□ -1.7
KCTD3-205ENST00000495537 SMARCA2P51531 1590 aa4.41□□□□□ -1.7
KCTD3-205ENST00000495537 RBM10P98175 930 aaKnown RBP4.41□□□□□ -1.7
KCTD3-205ENST00000495537 MAPKBP1O60336 1514 aa4.41□□□□□ -1.7
KCTD3-205ENST00000495537 FAM187AA6NFU0 413 aa4.41□□□□□ -1.7
KCTD3-205ENST00000495537 PDE4CQ08493 712 aa4.41□□□□□ -1.7
KCTD3-205ENST00000495537 LIAT1Q6ZQX7 453 aa4.41□□□□□ -1.7
KCTD3-205ENST00000495537 KCNV2Q8TDN2 545 aa4.41□□□□□ -1.7
KCTD3-205ENST00000495537 CENPJQ9HC77 1338 aaPredicted RBP4.4□□□□□ -1.7
KCTD3-205ENST00000495537 PPEF1O14829 653 aaPredicted RBP4.4□□□□□ -1.7
KCTD3-205ENST00000495537 EMID1Q96A84 441 aaPredicted RBP4.4□□□□□ -1.7
KCTD3-205ENST00000495537 VPS8Q8N3P4 1428 aa4.4□□□□□ -1.71
KCTD3-205ENST00000495537 GDF9O60383 454 aa4.4□□□□□ -1.71
KCTD3-205ENST00000495537 SLC10A3P09131 477 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 RPIAP49247 311 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 SCUBE3Q8IX30 993 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 GOLGA3Q08378 1498 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 CLIP1P30622 1438 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 WDR97A6NE52 1622 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 PDIA4P13667 645 aaKnown RBP4.39□□□□□ -1.71
KCTD3-205ENST00000495537 DDX10Q13206 875 aaKnown RBP4.39□□□□□ -1.71
KCTD3-205ENST00000495537 HIC1Q14526 733 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 HSP90AA2PQ14568 343 aaPredicted RBP4.39□□□□□ -1.71
KCTD3-205ENST00000495537 PXYLP1Q8TE99 480 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 SPSB2Q99619 263 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 CEP164Q9UPV0 1460 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 RNF123Q5XPI4 1314 aa4.39□□□□□ -1.71
KCTD3-205ENST00000495537 ANP32CO43423 234 aa4.38□□□□□ -1.71
KCTD3-205ENST00000495537 SMYD5Q6GMV2 418 aa4.38□□□□□ -1.71
KCTD3-205ENST00000495537 RRBP1Q9P2E9 1410 aaKnown RBP4.38□□□□□ -1.71
KCTD3-205ENST00000495537 ABCC8Q09428 1581 aa4.38□□□□□ -1.71
KCTD3-205ENST00000495537 TNFRSF10AO00220 468 aa4.38□□□□□ -1.71
KCTD3-205ENST00000495537 CD2BP2O95400 341 aaKnown RBP4.38□□□□□ -1.71
KCTD3-205ENST00000495537 IRX6P78412 446 aaPredicted RBP4.38□□□□□ -1.71
KCTD3-205ENST00000495537 B4GALNT3Q6L9W6 998 aa4.38□□□□□ -1.71
KCTD3-205ENST00000495537 PRDM4Q9UKN5 801 aa4.38□□□□□ -1.71
KCTD3-205ENST00000495537 KIF21BO75037 1637 aa4.38□□□□□ -1.71
KCTD3-205ENST00000495537 CALD1Q05682 793 aaKnown RBP4.37□□□□□ -1.71
KCTD3-205ENST00000495537 FAM161AQ3B820 660 aa4.37□□□□□ -1.71
KCTD3-205ENST00000495537 DCAF11Q8TEB1 546 aa4.37□□□□□ -1.71
KCTD3-205ENST00000495537 FRAT1Q92837 279 aaPredicted RBP4.37□□□□□ -1.71
KCTD3-205ENST00000495537 CCDC88BA6NC98 1476 aa4.37□□□□□ -1.71
KCTD3-205ENST00000495537 METTL3Q86U44 580 aaKnown RBP4.37□□□□□ -1.71
KCTD3-205ENST00000495537 SULF1Q8IWU6 871 aa4.36□□□□□ -1.71
KCTD3-205ENST00000495537 CRIPAKQ8N1N5 446 aa4.36□□□□□ -1.71
KCTD3-205ENST00000495537 AAASQ9NRG9 546 aa4.36□□□□□ -1.71
KCTD3-205ENST00000495537 FMNL1O95466 1100 aaPredicted RBP4.36□□□□□ -1.71
KCTD3-205ENST00000495537 ATP6V1AP38606 617 aa4.36□□□□□ -1.71
KCTD3-205ENST00000495537 FOXC1Q12948 553 aa4.36□□□□□ -1.71
KCTD3-205ENST00000495537 CTC1Q2NKJ3 1217 aa4.36□□□□□ -1.71
KCTD3-205ENST00000495537 CYP4X1Q8N118 509 aa4.36□□□□□ -1.71
KCTD3-205ENST00000495537 RDH13Q8NBN7 331 aa4.36□□□□□ -1.71
KCTD3-205ENST00000495537 A0A0U1RQG5 324 aaPredicted RBP4.35□□□□□ -1.71
KCTD3-205ENST00000495537 HNRNPUQ00839 825 aaKnown RBP eCLIP4.35□□□□□ -1.71
KCTD3-205ENST00000495537 GRIPAP1Q4V328 841 aa4.35□□□□□ -1.71
KCTD3-205ENST00000495537 TREML4Q6UXN2 200 aa4.35□□□□□ -1.71
KCTD3-205ENST00000495537 RRAGDQ9NQL2 400 aaPredicted RBP4.35□□□□□ -1.71
KCTD3-205ENST00000495537 SOGA1O94964 1423 aa4.35□□□□□ -1.71
KCTD3-205ENST00000495537 ZBED9Q6R2W3 1325 aa4.35□□□□□ -1.71
KCTD3-205ENST00000495537 BAZ1BQ9UIG0 1483 aaKnown RBP4.35□□□□□ -1.71
KCTD3-205ENST00000495537 ZBTB24O43167 697 aaPredicted RBP4.35□□□□□ -1.71
KCTD3-205ENST00000495537 HSP90AA1P07900 732 aaKnown RBP4.35□□□□□ -1.71
KCTD3-205ENST00000495537 NFKBIBQ15653 356 aa4.35□□□□□ -1.71
KCTD3-205ENST00000495537 PUS10Q3MIT2 529 aaKnown RBP4.35□□□□□ -1.71
KCTD3-205ENST00000495537 PLA2G2CQ5R387 149 aa4.35□□□□□ -1.71
KCTD3-205ENST00000495537 PKD2L1Q9P0L9 805 aa4.35□□□□□ -1.71
KCTD3-205ENST00000495537 LAS1LQ9Y4W2 734 aaKnown RBP4.35□□□□□ -1.71
KCTD3-205ENST00000495537 GNPATO15228 680 aa4.34□□□□□ -1.71
KCTD3-205ENST00000495537 AVPP01185 164 aa4.34□□□□□ -1.71
KCTD3-205ENST00000495537 CLCN1P35523 988 aa4.34□□□□□ -1.71
KCTD3-205ENST00000495537 MORN1Q5T089 497 aa4.34□□□□□ -1.71
KCTD3-205ENST00000495537 BAZ1AQ9NRL2 1556 aaPredicted RBP4.34□□□□□ -1.71
KCTD3-205ENST00000495537 SEMA3EO15041 775 aa4.34□□□□□ -1.72
KCTD3-205ENST00000495537 SMG6Q86US8 1419 aaKnown RBP4.34□□□□□ -1.72
KCTD3-205ENST00000495537 POTECB2RU33 542 aa4.33□□□□□ -1.72
KCTD3-205ENST00000495537 AXIN1O15169 862 aa4.33□□□□□ -1.72
KCTD3-205ENST00000495537 ST8SIA5O15466 376 aa4.33□□□□□ -1.72
KCTD3-205ENST00000495537 MS4A1P11836 297 aa4.33□□□□□ -1.72
KCTD3-205ENST00000495537 TAF7LQ5H9L4 462 aa4.33□□□□□ -1.72
KCTD3-205ENST00000495537 FCF1Q9Y324 198 aaKnown RBP4.33□□□□□ -1.72
KCTD3-205ENST00000495537 DDX11L8A8MPP1 907 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms