RNA–Protein interactions for RNA: ENST00000483891.1

COPS6-209, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-209ENST00000483891 BRWD3Q6RI45 1802 aa8.89□□□□□ -0.99
COPS6-209ENST00000483891 RPRD2Q5VT52 1461 aaKnown RBP8.89□□□□□ -0.99
COPS6-209ENST00000483891 RIMS2Q9UQ26 1411 aa8.88□□□□□ -0.99
COPS6-209ENST00000483891 XRN1Q8IZH2 1706 aaKnown RBP8.88□□□□□ -0.99
COPS6-209ENST00000483891 PPP1R15AO75807 674 aaPredicted RBP8.88□□□□□ -0.99
COPS6-209ENST00000483891 HRCP23327 699 aa8.88□□□□□ -0.99
COPS6-209ENST00000483891 BCANQ96GW7 911 aa8.88□□□□□ -0.99
COPS6-209ENST00000483891 TRPM2O94759 1503 aa8.88□□□□□ -0.99
COPS6-209ENST00000483891 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.87□□□□□ -0.99
COPS6-209ENST00000483891 MPHOSPH9Q99550 1183 aa8.87□□□□□ -0.99
COPS6-209ENST00000483891 DHX57Q6P158 1386 aaKnown RBP8.86□□□□□ -0.99
COPS6-209ENST00000483891 SOS2Q07890 1332 aaPredicted RBP8.86□□□□□ -0.99
COPS6-209ENST00000483891 ADAMTS2O95450 1211 aa8.86□□□□□ -0.99
COPS6-209ENST00000483891 GJD4Q96KN9 370 aaPredicted RBP8.86□□□□□ -0.99
COPS6-209ENST00000483891 PTPRUQ92729 1446 aa8.86□□□□□ -0.99
COPS6-209ENST00000483891 YY1P25490 414 aa8.85□□□□□ -0.99
COPS6-209ENST00000483891 DEFB132Q7Z7B7 95 aa8.85□□□□□ -0.99
COPS6-209ENST00000483891 CCER1Q8TC90 406 aaPredicted RBP8.85□□□□□ -0.99
COPS6-209ENST00000483891 AMOTL2Q9Y2J4 779 aa8.85□□□□□ -0.99
COPS6-209ENST00000483891 E9PCH4 1651 aa8.85□□□□□ -0.99
COPS6-209ENST00000483891 MYOM2P54296 1465 aa8.84□□□□□ -0.99
COPS6-209ENST00000483891 GLI3P10071 1580 aa8.84□□□□□ -0.99
COPS6-209ENST00000483891 ADGRL3Q9HAR2 1447 aa8.83□□□□□ -1
COPS6-209ENST00000483891 SF3B2Q13435 895 aaKnown RBP8.83□□□□□ -1
COPS6-209ENST00000483891 NALCNQ8IZF0 1738 aa8.83□□□□□ -1
COPS6-209ENST00000483891 ACIN1Q9UKV3 1341 aaKnown RBP8.82□□□□□ -1
COPS6-209ENST00000483891 ONECUT3O60422 494 aaPredicted RBP8.82□□□□□ -1
COPS6-209ENST00000483891 DDX17Q92841 729 aaKnown RBP8.82□□□□□ -1
COPS6-209ENST00000483891 C1orf167Q5SNV9 1468 aa8.82□□□□□ -1
COPS6-209ENST00000483891 NRXN3Q9Y4C0 1643 aa8.81□□□□□ -1
COPS6-209ENST00000483891 CHGAP10645 457 aaKnown RBP8.81□□□□□ -1
COPS6-209ENST00000483891 RALGAPBQ86X10 1494 aa8.81□□□□□ -1
COPS6-209ENST00000483891 SLIT2O94813 1529 aa8.8□□□□□ -1
COPS6-209ENST00000483891 PSDA5PKW4 1024 aaPredicted RBP8.8□□□□□ -1
COPS6-209ENST00000483891 CCDC144AA2RUR9 1427 aa8.8□□□□□ -1
COPS6-209ENST00000483891 NEUROD1Q13562 356 aa8.79□□□□□ -1
COPS6-209ENST00000483891 UNC5CLQ8IV45 518 aa8.79□□□□□ -1
COPS6-209ENST00000483891 RGPD1P0DJD0 1748 aa8.79□□□□□ -1
COPS6-209ENST00000483891 CLTCL1P53675 1640 aa8.79□□□□□ -1
COPS6-209ENST00000483891 DISP2A7MBM2 1401 aa8.79□□□□□ -1
COPS6-209ENST00000483891 BAG6P46379 1132 aa8.78□□□□□ -1
COPS6-209ENST00000483891 ANKRD30BQ9BXX2 1392 aa8.77□□□□□ -1.01
COPS6-209ENST00000483891 SIN3AQ96ST3 1273 aa8.77□□□□□ -1.01
COPS6-209ENST00000483891 UTRNP46939 3433 aa8.77□□□□□ -1.01
COPS6-209ENST00000483891 NWD2Q9ULI1 1742 aa8.77□□□□□ -1.01
COPS6-209ENST00000483891 POTEDQ86YR6 584 aa8.76□□□□□ -1.01
COPS6-209ENST00000483891 PRAG1Q86YV5 1406 aa8.75□□□□□ -1.01
COPS6-209ENST00000483891 ZNF326Q5BKZ1 582 aaKnown RBP8.75□□□□□ -1.01
COPS6-209ENST00000483891 KRT27Q7Z3Y8 459 aa8.75□□□□□ -1.01
COPS6-209ENST00000483891 SEPT12Q8IYM1 358 aa8.75□□□□□ -1.01
COPS6-209ENST00000483891 FOXD4L1Q9NU39 408 aa8.75□□□□□ -1.01
COPS6-209ENST00000483891 PXDNQ92626 1479 aa8.75□□□□□ -1.01
COPS6-209ENST00000483891 CEP350Q5VT06 3117 aa8.75□□□□□ -1.01
COPS6-209ENST00000483891 METP08581 1390 aa8.74□□□□□ -1.01
COPS6-209ENST00000483891 CHD4Q14839 1912 aa8.74□□□□□ -1.01
COPS6-209ENST00000483891 ZBTB22O15209 634 aa8.74□□□□□ -1.01
COPS6-209ENST00000483891 VPS72Q15906 364 aa8.74□□□□□ -1.01
COPS6-209ENST00000483891 RGL3Q3MIN7 710 aa8.74□□□□□ -1.01
COPS6-209ENST00000483891 ORAI2Q96SN7 254 aa8.74□□□□□ -1.01
COPS6-209ENST00000483891 NPHP3Q7Z494 1330 aa8.74□□□□□ -1.01
COPS6-209ENST00000483891 TNS1Q9HBL0 1735 aaKnown RBP8.74□□□□□ -1.01
COPS6-209ENST00000483891 USP32Q8NFA0 1604 aa8.73□□□□□ -1.01
COPS6-209ENST00000483891 R3HDM1Q15032 1099 aaKnown RBP8.73□□□□□ -1.01
COPS6-209ENST00000483891 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
COPS6-209ENST00000483891 NINLQ9Y2I6 1382 aa8.73□□□□□ -1.01
COPS6-209ENST00000483891 PLCH1Q4KWH8 1693 aa8.71□□□□□ -1.02
COPS6-209ENST00000483891 PARD3Q8TEW0 1356 aa8.71□□□□□ -1.02
COPS6-209ENST00000483891 KIF1BO60333 1816 aa8.7□□□□□ -1.02
COPS6-209ENST00000483891 RREB1Q92766 1687 aa8.7□□□□□ -1.02
COPS6-209ENST00000483891 SENP3-EIF4A1A0A087X0R7 540 aa8.7□□□□□ -1.02
COPS6-209ENST00000483891 SLC4A2P04920 1241 aa8.7□□□□□ -1.02
COPS6-209ENST00000483891 EN1Q05925 392 aaPredicted RBP8.7□□□□□ -1.02
COPS6-209ENST00000483891 ZNF784Q8NCA9 323 aaPredicted RBP8.7□□□□□ -1.02
COPS6-209ENST00000483891 LRPPRCP42704 1394 aaKnown RBP8.7□□□□□ -1.02
COPS6-209ENST00000483891 SPATA31E1Q6ZUB1 1445 aa8.7□□□□□ -1.02
COPS6-209ENST00000483891 CDC42BPGQ6DT37 1551 aa8.69□□□□□ -1.02
COPS6-209ENST00000483891 C1QTNF8P60827 252 aa8.69□□□□□ -1.02
COPS6-209ENST00000483891 CAMKK2Q96RR4 588 aa8.69□□□□□ -1.02
COPS6-209ENST00000483891 KDM2AQ9Y2K7 1162 aa8.69□□□□□ -1.02
COPS6-209ENST00000483891 CLSPNQ9HAW4 1339 aa8.69□□□□□ -1.02
COPS6-209ENST00000483891 ADGRB2O60241 1585 aa8.69□□□□□ -1.02
COPS6-209ENST00000483891 DCAF11Q8TEB1 546 aa8.68□□□□□ -1.02
COPS6-209ENST00000483891 NEXMIFQ5QGS0 1516 aa8.67□□□□□ -1.02
COPS6-209ENST00000483891 NUP188Q5SRE5 1749 aa8.67□□□□□ -1.02
COPS6-209ENST00000483891 NRAPQ86VF7 1730 aa8.67□□□□□ -1.02
COPS6-209ENST00000483891 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
COPS6-209ENST00000483891 CAMTA1Q9Y6Y1 1673 aa8.67□□□□□ -1.02
COPS6-209ENST00000483891 ABCA3Q99758 1704 aa8.66□□□□□ -1.02
COPS6-209ENST00000483891 THSD7AQ9UPZ6 1657 aa8.66□□□□□ -1.02
COPS6-209ENST00000483891 ROBO2Q9HCK4 1378 aa8.66□□□□□ -1.02
COPS6-209ENST00000483891 SPATA31A3Q5VYP0 1347 aa8.66□□□□□ -1.02
COPS6-209ENST00000483891 EZH2Q15910 746 aaKnown RBP8.66□□□□□ -1.02
COPS6-209ENST00000483891 KIF1AQ12756 1690 aa8.65□□□□□ -1.02
COPS6-209ENST00000483891 FOXO3O43524 673 aa8.65□□□□□ -1.02
COPS6-209ENST00000483891 ESCO1Q5FWF5 840 aa8.65□□□□□ -1.02
COPS6-209ENST00000483891 SPON1Q9HCB6 807 aa8.65□□□□□ -1.02
COPS6-209ENST00000483891 PPLO60437 1756 aa8.64□□□□□ -1.03
COPS6-209ENST00000483891 ADGRF5Q8IZF2 1346 aa8.64□□□□□ -1.03
COPS6-209ENST00000483891 KCNQ2O43526 872 aa8.64□□□□□ -1.03
COPS6-209ENST00000483891 IFT172Q9UG01 1749 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms