RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 MKRN3Q13064 507 aaKnown RBP13.94□□□□□ -0.18
HLA-B-253ENST00000481849 KANK1Q14678 1352 aa13.94□□□□□ -0.18
HLA-B-253ENST00000481849 CPS1P31327 1500 aa13.93□□□□□ -0.18
HLA-B-253ENST00000481849 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
HLA-B-253ENST00000481849 MED14O60244 1454 aa13.93□□□□□ -0.18
HLA-B-253ENST00000481849 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
HLA-B-253ENST00000481849 CROCC2H7BZ55 1655 aa13.92□□□□□ -0.18
HLA-B-253ENST00000481849 TXNDC2Q86VQ3 553 aa13.92□□□□□ -0.18
HLA-B-253ENST00000481849 LTKP29376 864 aa13.91□□□□□ -0.18
HLA-B-253ENST00000481849 SLAIN1Q8ND83 568 aa13.91□□□□□ -0.18
HLA-B-253ENST00000481849 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.18
HLA-B-253ENST00000481849 PDAP1Q13442 181 aaKnown RBP13.9□□□□□ -0.18
HLA-B-253ENST00000481849 DEPDC5O75140 1603 aa13.9□□□□□ -0.19
HLA-B-253ENST00000481849 SCAF11Q99590 1463 aaKnown RBP13.89□□□□□ -0.19
HLA-B-253ENST00000481849 IQGAP1P46940 1657 aa13.88□□□□□ -0.19
HLA-B-253ENST00000481849 TRIM52Q96A61 297 aa13.88□□□□□ -0.19
HLA-B-253ENST00000481849 EID1Q9Y6B2 187 aa13.88□□□□□ -0.19
HLA-B-253ENST00000481849 IDI1Q13907 227 aa13.87□□□□□ -0.19
HLA-B-253ENST00000481849 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
HLA-B-253ENST00000481849 CEP350Q5VT06 3117 aa13.87□□□□□ -0.19
HLA-B-253ENST00000481849 UBR1Q8IWV7 1749 aa13.87□□□□□ -0.19
HLA-B-253ENST00000481849 SLC34A2O95436 690 aa13.85□□□□□ -0.19
HLA-B-253ENST00000481849 ADGRL2O95490 1459 aa13.85□□□□□ -0.19
HLA-B-253ENST00000481849 ARHGAP23Q9P227 1491 aa13.85□□□□□ -0.19
HLA-B-253ENST00000481849 LRRC7Q96NW7 1537 aa13.85□□□□□ -0.19
HLA-B-253ENST00000481849 TMEM2Q9UHN6 1383 aa13.84□□□□□ -0.19
HLA-B-253ENST00000481849 ANKRD50Q9ULJ7 1429 aa13.84□□□□□ -0.19
HLA-B-253ENST00000481849 LRP5O75197 1615 aa13.84□□□□□ -0.19
HLA-B-253ENST00000481849 ITGAEP38570 1179 aa13.84□□□□□ -0.19
HLA-B-253ENST00000481849 SLIT1O75093 1534 aa13.84□□□□□ -0.19
HLA-B-253ENST00000481849 LMTK2Q8IWU2 1503 aa13.84□□□□□ -0.19
HLA-B-253ENST00000481849 PIK3C2BO00750 1634 aa13.83□□□□□ -0.2
HLA-B-253ENST00000481849 BCANQ96GW7 911 aa13.83□□□□□ -0.2
HLA-B-253ENST00000481849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.2
HLA-B-253ENST00000481849 CFAP65Q6ZU64 1925 aaKnown RBP13.82□□□□□ -0.2
HLA-B-253ENST00000481849 SENP3-EIF4A1A0A087X0R7 540 aa13.82□□□□□ -0.2
HLA-B-253ENST00000481849 YY1P25490 414 aa13.82□□□□□ -0.2
HLA-B-253ENST00000481849 SLC26A8Q96RN1 970 aa13.82□□□□□ -0.2
HLA-B-253ENST00000481849 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.82□□□□□ -0.2
HLA-B-253ENST00000481849 EFCAB6Q5THR3 1501 aa13.81□□□□□ -0.2
HLA-B-253ENST00000481849 NOS1P29475 1434 aa13.81□□□□□ -0.2
HLA-B-253ENST00000481849 SYNMO15061 1565 aa13.8□□□□□ -0.2
HLA-B-253ENST00000481849 STRCP1A6NGW2 1772 aa13.8□□□□□ -0.2
HLA-B-253ENST00000481849 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
HLA-B-253ENST00000481849 L3MBTL3Q96JM7 780 aaPredicted RBP13.79□□□□□ -0.2
HLA-B-253ENST00000481849 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
HLA-B-253ENST00000481849 SLC52A1Q9NWF4 448 aa13.79□□□□□ -0.2
HLA-B-253ENST00000481849 CHGAP10645 457 aaKnown RBP13.78□□□□□ -0.2
HLA-B-253ENST00000481849 ADGRB3O60242 1522 aa13.76□□□□□ -0.21
HLA-B-253ENST00000481849 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
HLA-B-253ENST00000481849 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
HLA-B-253ENST00000481849 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
HLA-B-253ENST00000481849 TMEM94Q12767 1356 aa13.75□□□□□ -0.21
HLA-B-253ENST00000481849 KCNA6P17658 529 aa13.75□□□□□ -0.21
HLA-B-253ENST00000481849 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
HLA-B-253ENST00000481849 C3orf67Q6ZVT6 689 aa13.74□□□□□ -0.21
HLA-B-253ENST00000481849 RPRD2Q5VT52 1461 aaKnown RBP13.74□□□□□ -0.21
HLA-B-253ENST00000481849 ROCK1Q13464 1354 aa13.73□□□□□ -0.21
HLA-B-253ENST00000481849 RIMS2Q9UQ26 1411 aa13.73□□□□□ -0.21
HLA-B-253ENST00000481849 NUP155O75694 1391 aa13.72□□□□□ -0.21
HLA-B-253ENST00000481849 ST18O60284 1047 aa13.72□□□□□ -0.21
HLA-B-253ENST00000481849 TET3O43151 1660 aa13.72□□□□□ -0.21
HLA-B-253ENST00000481849 CDAN1Q8IWY9 1227 aa13.71□□□□□ -0.21
HLA-B-253ENST00000481849 KDM5AP29375 1690 aaKnown RBP13.7□□□□□ -0.22
HLA-B-253ENST00000481849 SNPHO15079 494 aa13.7□□□□□ -0.22
HLA-B-253ENST00000481849 HDGFP51858 240 aaKnown RBP13.7□□□□□ -0.22
HLA-B-253ENST00000481849 ZFYVE9O95405 1425 aa13.7□□□□□ -0.22
HLA-B-253ENST00000481849 UNC13BO14795 1591 aa13.7□□□□□ -0.22
HLA-B-253ENST00000481849 G3V3G9 751 aa13.69□□□□□ -0.22
HLA-B-253ENST00000481849 EP400Q96L91 3159 aa13.69□□□□□ -0.22
HLA-B-253ENST00000481849 PLEKHG1Q9ULL1 1385 aa13.69□□□□□ -0.22
HLA-B-253ENST00000481849 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.67□□□□□ -0.22
HLA-B-253ENST00000481849 TMEM131LA2VDJ0 1609 aa13.66□□□□□ -0.22
HLA-B-253ENST00000481849 ZNF772Q68DY9 489 aaPredicted RBP13.66□□□□□ -0.22
HLA-B-253ENST00000481849 C14orf37Q86TY3 774 aa13.66□□□□□ -0.22
HLA-B-253ENST00000481849 MSH6P52701 1360 aa13.66□□□□□ -0.22
HLA-B-253ENST00000481849 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
HLA-B-253ENST00000481849 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
HLA-B-253ENST00000481849 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
HLA-B-253ENST00000481849 XIRP1Q702N8 1843 aaKnown RBP13.65□□□□□ -0.22
HLA-B-253ENST00000481849 RIOK3O14730 519 aaKnown RBP13.65□□□□□ -0.22
HLA-B-253ENST00000481849 RXRBP28702 533 aa13.65□□□□□ -0.22
HLA-B-253ENST00000481849 DPY19L2Q6NUT2 758 aa13.65□□□□□ -0.22
HLA-B-253ENST00000481849 TBX22Q9Y458 520 aa13.65□□□□□ -0.22
HLA-B-253ENST00000481849 E9PCH4 1651 aa13.65□□□□□ -0.22
HLA-B-253ENST00000481849 IQGAP3Q86VI3 1631 aa13.64□□□□□ -0.23
HLA-B-253ENST00000481849 NWD1Q149M9 1564 aa13.64□□□□□ -0.23
HLA-B-253ENST00000481849 ZNF326Q5BKZ1 582 aaKnown RBP13.63□□□□□ -0.23
HLA-B-253ENST00000481849 SLAIN2Q9P270 581 aa13.63□□□□□ -0.23
HLA-B-253ENST00000481849 ADAMTS13Q76LX8 1427 aa13.63□□□□□ -0.23
HLA-B-253ENST00000481849 EFCAB3Q8N7B9 438 aa13.62□□□□□ -0.23
HLA-B-253ENST00000481849 MYO5BQ9ULV0 1848 aa13.61□□□□□ -0.23
HLA-B-253ENST00000481849 TMEM121BQ9BXQ6 578 aaPredicted RBP13.6□□□□□ -0.23
HLA-B-253ENST00000481849 BOLA1Q9Y3E2 137 aa13.6□□□□□ -0.23
HLA-B-253ENST00000481849 ROBO1Q9Y6N7 1651 aa13.59□□□□□ -0.23
HLA-B-253ENST00000481849 RGS12O14924 1447 aa13.59□□□□□ -0.23
HLA-B-253ENST00000481849 AMOTL2Q9Y2J4 779 aa13.59□□□□□ -0.23
HLA-B-253ENST00000481849 RRBP1Q9P2E9 1410 aaKnown RBP13.58□□□□□ -0.24
HLA-B-253ENST00000481849 ATF3P18847 181 aa13.58□□□□□ -0.24
HLA-B-253ENST00000481849 NHSL1Q5SYE7 1610 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 214.6 ms