RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 STAG3Q9UJ98 1225 aa22.4■■□□□ 1.18
SH3D21-203ENST00000480549 YTHDC2Q9H6S0 1430 aaKnown RBP22.4■■□□□ 1.18
SH3D21-203ENST00000480549 PUS7Q96PZ0 661 aaKnown RBP22.39■■□□□ 1.18
SH3D21-203ENST00000480549 SENP3Q9H4L4 574 aaPredicted RBP22.38■■□□□ 1.17
SH3D21-203ENST00000480549 RIMS2Q9UQ26 1411 aa22.38■■□□□ 1.17
SH3D21-203ENST00000480549 EVC2Q86UK5 1308 aa22.37■■□□□ 1.17
SH3D21-203ENST00000480549 IRX6P78412 446 aaPredicted RBP22.37■■□□□ 1.17
SH3D21-203ENST00000480549 SLC12A5Q9H2X9 1139 aa22.37■■□□□ 1.17
SH3D21-203ENST00000480549 NSD3Q9BZ95 1437 aa22.36■■□□□ 1.17
SH3D21-203ENST00000480549 NRXN3Q9Y4C0 1643 aa22.36■■□□□ 1.17
SH3D21-203ENST00000480549 STK26Q9P289 416 aa22.36■■□□□ 1.17
SH3D21-203ENST00000480549 ESF1Q9H501 851 aaKnown RBP22.34■■□□□ 1.17
SH3D21-203ENST00000480549 ADAMTS8Q9UP79 889 aa22.32■■□□□ 1.16
SH3D21-203ENST00000480549 UBR1Q8IWV7 1749 aa22.31■■□□□ 1.16
SH3D21-203ENST00000480549 SAFB2Q14151 953 aaKnown RBP eCLIP22.31■■□□□ 1.16
SH3D21-203ENST00000480549 DLC1Q96QB1 1528 aa22.31■■□□□ 1.16
SH3D21-203ENST00000480549 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
SH3D21-203ENST00000480549 TNRQ92752 1358 aa22.3■■□□□ 1.16
SH3D21-203ENST00000480549 PRAM1Q96QH2 718 aa22.3■■□□□ 1.16
SH3D21-203ENST00000480549 CABP2Q9NPB3 220 aa22.3■■□□□ 1.16
SH3D21-203ENST00000480549 ANKRD36BQ8N2N9 1353 aa22.29■■□□□ 1.16
SH3D21-203ENST00000480549 NOP58Q9Y2X3 529 aaKnown RBP22.28■■□□□ 1.16
SH3D21-203ENST00000480549 EIF5BO60841 1220 aaKnown RBP22.27■■□□□ 1.16
SH3D21-203ENST00000480549 PDE3BQ13370 1112 aa22.27■■□□□ 1.16
SH3D21-203ENST00000480549 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
SH3D21-203ENST00000480549 WDR43Q15061 677 aaKnown RBP eCLIP22.26■■□□□ 1.15
SH3D21-203ENST00000480549 NINLQ9Y2I6 1382 aa22.26■■□□□ 1.15
SH3D21-203ENST00000480549 RTL5Q5HYW3 569 aaPredicted RBP22.25■■□□□ 1.15
SH3D21-203ENST00000480549 MINK1Q8N4C8 1332 aaPredicted RBP22.25■■□□□ 1.15
SH3D21-203ENST00000480549 POGKQ9P215 609 aa22.24■■□□□ 1.15
SH3D21-203ENST00000480549 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.24■■□□□ 1.15
SH3D21-203ENST00000480549 SHPRHQ149N8 1683 aa22.23■■□□□ 1.15
SH3D21-203ENST00000480549 C3P01024 1663 aa22.23■■□□□ 1.15
SH3D21-203ENST00000480549 KNDC1Q76NI1 1749 aa22.23■■□□□ 1.15
SH3D21-203ENST00000480549 POLR3AO14802 1390 aaPredicted RBP22.22■■□□□ 1.15
SH3D21-203ENST00000480549 ATAD2Q6PL18 1390 aa22.22■■□□□ 1.15
SH3D21-203ENST00000480549 CGNL1Q0VF96 1302 aa22.22■■□□□ 1.15
SH3D21-203ENST00000480549 CD163L1Q9NR16 1453 aa22.22■■□□□ 1.15
SH3D21-203ENST00000480549 A0A1W2PP64 1363 aa22.22■■□□□ 1.15
SH3D21-203ENST00000480549 SRPK2P78362 688 aaKnown RBP22.22■■□□□ 1.15
SH3D21-203ENST00000480549 ABCC11Q96J66 1382 aa22.21■■□□□ 1.15
SH3D21-203ENST00000480549 MORC1Q86VD1 984 aa22.2■■□□□ 1.14
SH3D21-203ENST00000480549 CDCA7LQ96GN5 454 aa22.2■■□□□ 1.14
SH3D21-203ENST00000480549 FER1L4A9Z1Z3 1794 aa22.2■■□□□ 1.14
SH3D21-203ENST00000480549 NSD2O96028 1365 aa22.2■■□□□ 1.14
SH3D21-203ENST00000480549 TMEM2Q9UHN6 1383 aa22.2■■□□□ 1.14
SH3D21-203ENST00000480549 METP08581 1390 aa22.19■■□□□ 1.14
SH3D21-203ENST00000480549 PPP4R2Q9NY27 417 aa22.19■■□□□ 1.14
SH3D21-203ENST00000480549 PLEKHH1Q9ULM0 1364 aa22.19■■□□□ 1.14
SH3D21-203ENST00000480549 PKNOX2Q96KN3 472 aa22.19■■□□□ 1.14
SH3D21-203ENST00000480549 ANKRD26Q9UPS8 1709 aa22.18■■□□□ 1.14
SH3D21-203ENST00000480549 NLRP1Q9C000 1473 aa22.18■■□□□ 1.14
SH3D21-203ENST00000480549 WAPLQ7Z5K2 1190 aa22.16■■□□□ 1.14
SH3D21-203ENST00000480549 CDK19Q9BWU1 502 aa22.16■■□□□ 1.14
SH3D21-203ENST00000480549 ZNF521Q96K83 1311 aa22.15■■□□□ 1.14
SH3D21-203ENST00000480549 CPS1P31327 1500 aa22.15■■□□□ 1.14
SH3D21-203ENST00000480549 TECPR2O15040 1411 aa22.14■■□□□ 1.14
SH3D21-203ENST00000480549 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.14
SH3D21-203ENST00000480549 CEBPAP49715 358 aaPredicted RBP22.13■■□□□ 1.13
SH3D21-203ENST00000480549 TNNT2P45379 298 aaPredicted RBP22.13■■□□□ 1.13
SH3D21-203ENST00000480549 RCAN3Q9UKA8 241 aa22.12■■□□□ 1.13
SH3D21-203ENST00000480549 CCDC146Q8IYE0 955 aa22.12■■□□□ 1.13
SH3D21-203ENST00000480549 KIF20BQ96Q89 1820 aa22.12■■□□□ 1.13
SH3D21-203ENST00000480549 ADAMTS13Q76LX8 1427 aa22.12■■□□□ 1.13
SH3D21-203ENST00000480549 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
SH3D21-203ENST00000480549 FAM135BQ49AJ0 1406 aa22.11■■□□□ 1.13
SH3D21-203ENST00000480549 TERF2IPQ9NYB0 399 aa22.11■■□□□ 1.13
SH3D21-203ENST00000480549 MED14O60244 1454 aa22.1■■□□□ 1.13
SH3D21-203ENST00000480549 RRP1P56182 461 aaKnown RBP22.09■■□□□ 1.13
SH3D21-203ENST00000480549 MTHFSP49914 203 aa22.08■■□□□ 1.13
SH3D21-203ENST00000480549 SIRT1Q96EB6 747 aa22.08■■□□□ 1.13
SH3D21-203ENST00000480549 PLEKHG1Q9ULL1 1385 aa22.08■■□□□ 1.13
SH3D21-203ENST00000480549 ATP7BP35670 1465 aa22.08■■□□□ 1.13
SH3D21-203ENST00000480549 SLIT1O75093 1534 aa22.08■■□□□ 1.12
SH3D21-203ENST00000480549 CABP1Q9NZU7 370 aa22.07■■□□□ 1.12
SH3D21-203ENST00000480549 LTKP29376 864 aa22.07■■□□□ 1.12
SH3D21-203ENST00000480549 TXNDC2Q86VQ3 553 aa22.07■■□□□ 1.12
SH3D21-203ENST00000480549 ARHGAP23Q9P227 1491 aa22.06■■□□□ 1.12
SH3D21-203ENST00000480549 APAF1O14727 1248 aa22.06■■□□□ 1.12
SH3D21-203ENST00000480549 B4GALNT3Q6L9W6 998 aa22.06■■□□□ 1.12
SH3D21-203ENST00000480549 FYB1O15117 783 aa22.05■■□□□ 1.12
SH3D21-203ENST00000480549 HDGFL2Q7Z4V5 671 aaPredicted RBP22.05■■□□□ 1.12
SH3D21-203ENST00000480549 DUSP27Q5VZP5 1158 aa22.04■■□□□ 1.12
SH3D21-203ENST00000480549 GGNBP2Q9H3C7 697 aa22.04■■□□□ 1.12
SH3D21-203ENST00000480549 WASLO00401 505 aaPredicted RBP22.04■■□□□ 1.12
SH3D21-203ENST00000480549 GOLGA2Q08379 1002 aa22.03■■□□□ 1.12
SH3D21-203ENST00000480549 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
SH3D21-203ENST00000480549 COL3A1P02461 1466 aaPredicted RBP22.01■■□□□ 1.11
SH3D21-203ENST00000480549 ROBO2Q9HCK4 1378 aa22.01■■□□□ 1.11
SH3D21-203ENST00000480549 CFAP53Q96M91 514 aa22.01■■□□□ 1.11
SH3D21-203ENST00000480549 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.01■■□□□ 1.11
SH3D21-203ENST00000480549 ADGRB2O60241 1585 aa22.01■■□□□ 1.11
SH3D21-203ENST00000480549 TRMT2AQ8IZ69 625 aaKnown RBP22.01■■□□□ 1.11
SH3D21-203ENST00000480549 CPSF1Q10570 1443 aaKnown RBP22■■□□□ 1.11
SH3D21-203ENST00000480549 SLFN5Q08AF3 891 aa22■■□□□ 1.11
SH3D21-203ENST00000480549 NGEFQ8N5V2 710 aa22■■□□□ 1.11
SH3D21-203ENST00000480549 MON2Q7Z3U7 1717 aa22■■□□□ 1.11
SH3D21-203ENST00000480549 PPIP5K1Q6PFW1 1433 aa22■■□□□ 1.11
SH3D21-203ENST00000480549 AKAP12Q02952 1782 aa21.99■■□□□ 1.11
SH3D21-203ENST00000480549 CDC42BPGQ6DT37 1551 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms