RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 KINO60870 393 aaKnown RBP7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 G3BP1Q13283 466 aaKnown RBP eCLIP7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 ERC1Q8IUD2 1116 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 TCP11L2Q8N4U5 519 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 ABCC11Q96J66 1382 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 NEMFO60524 1076 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 GRPEL1Q9HAV7 217 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 FRAT2O75474 233 aaPredicted RBP7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 CCDC112Q8NEF3 446 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 PDCL3Q9H2J4 239 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 TSPY26PQ9H489 355 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 LUC7LQ9NQ29 371 aaKnown RBP7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 MYO6Q9UM54 1294 aa7.39□□□□□ -1.23
PRPF4B-205ENST00000480058 NGDNQ8NEJ9 315 aaKnown RBP7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 GBP3Q9H0R5 595 aa7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 PLIN1O60240 522 aa7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 SLC4A3P48751 1232 aa7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 RILPL2Q969X0 211 aa7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 EIF3JO75822 258 aaKnown RBP7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 RUFY1Q96T51 708 aa7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 ERCC6Q03468 1493 aa7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 ZNF396Q96N95 335 aaPredicted RBP7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 NPHP1O15259 732 aa7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 KRT85P78386 507 aa7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 STK26Q9P289 416 aa7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 R3HCC1Q9Y3T6 440 aaKnown RBP7.38□□□□□ -1.23
PRPF4B-205ENST00000480058 K7ELQ4 463 aaPredicted RBP7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 XBP1P17861 261 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 CCDC191Q8NCU4 936 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 LNPKQ9C0E8 428 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 C9orf78Q9NZ63 289 aaPredicted RBP7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 HNRNPMP52272 730 aaKnown RBP eCLIP7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 HS1BP3Q53T59 392 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 PRXQ9BXM0 1461 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 TRIM5Q9C035 493 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 ADAMTS8Q9UP79 889 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 PDZRN3Q9UPQ7 1066 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 TRAK1Q9UPV9 953 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 VPS37CA5D8V6 355 aaPredicted RBP7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 KRT32Q14532 448 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 OLFM4Q6UX06 510 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 PPP6R1Q9UPN7 881 aa7.37□□□□□ -1.23
PRPF4B-205ENST00000480058 RPGRIP1LQ68CZ1 1315 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 PLEKHH1Q9ULM0 1364 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 PPP2R1AP30153 589 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 RDXP35241 583 aaKnown RBP7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 FILIP1LQ4L180 1135 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 KIF21BO75037 1637 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 RALYLQ86SE5 291 aaKnown RBP7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 GAS2L2Q8NHY3 880 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 PKNOX2Q96KN3 472 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 FAM107BQ9H098 131 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 DACH1Q9UI36 760 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 ANKRD30BQ9BXX2 1392 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 MAP3K1Q13233 1512 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 ATF7IPQ6VMQ6 1270 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 A0A0G2JS52 829 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 CCT4P50991 539 aaKnown RBP7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 NEK4P51957 841 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 SMARCE1Q969G3 411 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 KIAA1107Q9UPP5 1409 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 CNTROBQ8N137 903 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 NCAPD3P42695 1498 aa7.36□□□□□ -1.23
PRPF4B-205ENST00000480058 FKBP5Q13451 457 aaPredicted RBP7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 SAFB2Q14151 953 aaKnown RBP eCLIP7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 CAGE1Q8TC20 777 aa7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 CBFA2T2O43439 604 aa7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 LEKR1Q6ZMV7 388 aa7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 CEP57L1Q8IYX8 460 aa7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 CCAR2Q8N163 923 aaKnown RBP7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 TMX4Q9H1E5 349 aaPredicted RBP7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 MCTP1Q6DN14 999 aa7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 BCL2L13Q9BXK5 485 aa7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 CFAP45Q9UL16 551 aa7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 MVPQ14764 893 aaKnown RBP7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 SCAND2PQ9GZW5 306 aaPredicted RBP7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 EFCAB5A4FU69 1503 aa7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 AMOTL1Q8IY63 956 aa7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 PRIMPOLQ96LW4 560 aa7.35□□□□□ -1.23
PRPF4B-205ENST00000480058 GOLGA6L7A0A1B0GV03 622 aa7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 CSB-PGBD3P0DP91 1061 aa7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 UVSSAQ2YD98 709 aa7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 FOXD4L1Q9NU39 408 aa7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 UBTFL1P0CB47 393 aaPredicted RBP7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 MARCH6O60337 910 aa7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 C1orf141Q5JVX7 400 aa7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 IQCEQ6IPM2 695 aa7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 CREBRFQ8IUR6 639 aa7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 RRP7AQ9Y3A4 280 aaKnown RBP7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 POLA1P09884 1462 aaPredicted RBP7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 TUBB4BP68371 445 aa7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 ZNF592Q92610 1267 aa7.34□□□□□ -1.23
PRPF4B-205ENST00000480058 CLCN1P35523 988 aa7.34□□□□□ -1.24
PRPF4B-205ENST00000480058 SART3Q15020 963 aaKnown RBP7.34□□□□□ -1.24
PRPF4B-205ENST00000480058 BRMS1Q9HCU9 246 aa7.34□□□□□ -1.24
PRPF4B-205ENST00000480058 SLC52A1Q9NWF4 448 aa7.33□□□□□ -1.24
PRPF4B-205ENST00000480058 CCDC30Q5VVM6 783 aa7.33□□□□□ -1.24
PRPF4B-205ENST00000480058 NCOA2Q15596 1464 aa7.33□□□□□ -1.24
PRPF4B-205ENST00000480058 ZNF692Q9BU19 519 aaPredicted RBP7.33□□□□□ -1.24
PRPF4B-205ENST00000480058 H0YHG0 523 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms