RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 PDCL3Q9H2J4 239 aa16.97■□□□□ 0.31
DFFB-209ENST00000477548 PIK3C2GO75747 1445 aa16.96■□□□□ 0.31
DFFB-209ENST00000477548 HSCBQ8IWL3 235 aa16.96■□□□□ 0.31
DFFB-209ENST00000477548 WDR7Q9Y4E6 1490 aa16.96■□□□□ 0.31
DFFB-209ENST00000477548 LAMC1P11047 1609 aa16.96■□□□□ 0.31
DFFB-209ENST00000477548 ZMYM3Q14202 1370 aa16.96■□□□□ 0.3
DFFB-209ENST00000477548 RWDD1Q9H446 243 aaPredicted RBP16.95■□□□□ 0.3
DFFB-209ENST00000477548 SPAG9O60271 1321 aaKnown RBP16.94■□□□□ 0.3
DFFB-209ENST00000477548 ABCC1P33527 1531 aa16.94■□□□□ 0.3
DFFB-209ENST00000477548 MAST1Q9Y2H9 1570 aa16.93■□□□□ 0.3
DFFB-209ENST00000477548 KIAA1211Q6ZU35 1233 aa16.93■□□□□ 0.3
DFFB-209ENST00000477548 CDCA8Q53HL2 280 aa16.92■□□□□ 0.3
DFFB-209ENST00000477548 ASXL1Q8IXJ9 1541 aa16.92■□□□□ 0.3
DFFB-209ENST00000477548 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
DFFB-209ENST00000477548 EIF2AK4Q9P2K8 1649 aaKnown RBP16.91■□□□□ 0.3
DFFB-209ENST00000477548 GAS2L3Q86XJ1 694 aa16.91■□□□□ 0.3
DFFB-209ENST00000477548 RLBP1P12271 317 aa16.9■□□□□ 0.3
DFFB-209ENST00000477548 TNNQ9UQP3 1299 aa16.9■□□□□ 0.3
DFFB-209ENST00000477548 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
DFFB-209ENST00000477548 UNC13BO14795 1591 aa16.9■□□□□ 0.3
DFFB-209ENST00000477548 PLXNC1O60486 1568 aa16.9■□□□□ 0.3
DFFB-209ENST00000477548 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
DFFB-209ENST00000477548 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
DFFB-209ENST00000477548 DUOX2Q9NRD8 1548 aa16.89■□□□□ 0.29
DFFB-209ENST00000477548 NEUROD2Q15784 382 aa16.89■□□□□ 0.29
DFFB-209ENST00000477548 GBP4Q96PP9 640 aa16.89■□□□□ 0.29
DFFB-209ENST00000477548 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
DFFB-209ENST00000477548 FANCAO15360 1455 aa16.88■□□□□ 0.29
DFFB-209ENST00000477548 ASXL2Q76L83 1435 aa16.88■□□□□ 0.29
DFFB-209ENST00000477548 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
DFFB-209ENST00000477548 SCAPERQ9BY12 1400 aa16.88■□□□□ 0.29
DFFB-209ENST00000477548 TNPO1Q92973 898 aaKnown RBP16.87■□□□□ 0.29
DFFB-209ENST00000477548 RTEL1-TNFRSF6BF6WH68 1400 aa16.87■□□□□ 0.29
DFFB-209ENST00000477548 SKOR2Q2VWA4 1001 aaPredicted RBP16.86■□□□□ 0.29
DFFB-209ENST00000477548 ANP32BQ92688 251 aaKnown RBP16.86■□□□□ 0.29
DFFB-209ENST00000477548 KIF3BO15066 747 aa16.86■□□□□ 0.29
DFFB-209ENST00000477548 CCDC173Q0VFZ6 552 aa16.86■□□□□ 0.29
DFFB-209ENST00000477548 IQGAP3Q86VI3 1631 aa16.85■□□□□ 0.29
DFFB-209ENST00000477548 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
DFFB-209ENST00000477548 MSNP26038 577 aaKnown RBP16.84■□□□□ 0.29
DFFB-209ENST00000477548 ZSCAN30Q86W11 494 aa16.84■□□□□ 0.29
DFFB-209ENST00000477548 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
DFFB-209ENST00000477548 ZFYVE16Q7Z3T8 1539 aa16.84■□□□□ 0.29
DFFB-209ENST00000477548 SYNMO15061 1565 aa16.84■□□□□ 0.29
DFFB-209ENST00000477548 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
DFFB-209ENST00000477548 CALD1Q05682 793 aaKnown RBP16.84■□□□□ 0.29
DFFB-209ENST00000477548 CHMP4AQ9BY43 222 aa16.83■□□□□ 0.29
DFFB-209ENST00000477548 NASPP49321 788 aaPredicted RBP16.83■□□□□ 0.28
DFFB-209ENST00000477548 PTMSP20962 102 aa16.83■□□□□ 0.28
DFFB-209ENST00000477548 OFD1O75665 1012 aa16.82■□□□□ 0.28
DFFB-209ENST00000477548 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.82■□□□□ 0.28
DFFB-209ENST00000477548 DDIT3P35638 169 aa16.82■□□□□ 0.28
DFFB-209ENST00000477548 CIZ1Q9ULV3 898 aaPredicted RBP16.82■□□□□ 0.28
DFFB-209ENST00000477548 ADGRL1O94910 1474 aa16.82■□□□□ 0.28
DFFB-209ENST00000477548 FTSJ3Q8IY81 847 aaKnown RBP16.81■□□□□ 0.28
DFFB-209ENST00000477548 MVPQ14764 893 aaKnown RBP16.81■□□□□ 0.28
DFFB-209ENST00000477548 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
DFFB-209ENST00000477548 RAB3GAP1Q15042 981 aa16.8■□□□□ 0.28
DFFB-209ENST00000477548 SMC5Q8IY18 1101 aa16.8■□□□□ 0.28
DFFB-209ENST00000477548 PPP1R9BQ96SB3 815 aa16.8■□□□□ 0.28
DFFB-209ENST00000477548 FAM13BQ9NYF5 915 aa16.8■□□□□ 0.28
DFFB-209ENST00000477548 SNX21Q969T3 373 aa16.79■□□□□ 0.28
DFFB-209ENST00000477548 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
DFFB-209ENST00000477548 TULP1O00294 542 aaPredicted RBP16.78■□□□□ 0.28
DFFB-209ENST00000477548 RNF17Q9BXT8 1623 aaKnown RBP16.78■□□□□ 0.28
DFFB-209ENST00000477548 GOLGA6L22H0YM25 854 aa16.78■□□□□ 0.28
DFFB-209ENST00000477548 RIPK4P57078 832 aa16.78■□□□□ 0.28
DFFB-209ENST00000477548 R3HCC1Q9Y3T6 440 aaKnown RBP16.77■□□□□ 0.28
DFFB-209ENST00000477548 ABCA9Q8IUA7 1624 aa16.77■□□□□ 0.28
DFFB-209ENST00000477548 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.27
DFFB-209ENST00000477548 ATP7AQ04656 1500 aa16.77■□□□□ 0.27
DFFB-209ENST00000477548 ZKSCAN2Q63HK3 967 aa16.76■□□□□ 0.27
DFFB-209ENST00000477548 DZIP1LQ8IYY4 767 aaKnown RBP16.76■□□□□ 0.27
DFFB-209ENST00000477548 TCP11L2Q8N4U5 519 aa16.76■□□□□ 0.27
DFFB-209ENST00000477548 RUNDC1Q96C34 613 aa16.76■□□□□ 0.27
DFFB-209ENST00000477548 MAP7D2Q96T17 732 aa16.76■□□□□ 0.27
DFFB-209ENST00000477548 ATP10AO60312 1499 aa16.76■□□□□ 0.27
DFFB-209ENST00000477548 RBM25P49756 843 aaKnown RBP16.76■□□□□ 0.27
DFFB-209ENST00000477548 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
DFFB-209ENST00000477548 TERF1P54274 439 aa16.76■□□□□ 0.27
DFFB-209ENST00000477548 SCAF11Q99590 1463 aaKnown RBP16.75■□□□□ 0.27
DFFB-209ENST00000477548 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
DFFB-209ENST00000477548 UGGT1Q9NYU2 1555 aa16.75■□□□□ 0.27
DFFB-209ENST00000477548 WDR63Q8IWG1 891 aa16.75■□□□□ 0.27
DFFB-209ENST00000477548 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
DFFB-209ENST00000477548 CHMP4BQ9H444 224 aaKnown RBP16.74■□□□□ 0.27
DFFB-209ENST00000477548 ARAP3Q8WWN8 1544 aa16.73■□□□□ 0.27
DFFB-209ENST00000477548 RAPGEF3O95398 923 aa16.73■□□□□ 0.27
DFFB-209ENST00000477548 TNNT2P45379 298 aaPredicted RBP16.73■□□□□ 0.27
DFFB-209ENST00000477548 POLR3AO14802 1390 aaPredicted RBP16.73■□□□□ 0.27
DFFB-209ENST00000477548 HDAC1Q13547 482 aaPredicted RBP16.73■□□□□ 0.27
DFFB-209ENST00000477548 CARD14Q9BXL6 1004 aa16.73■□□□□ 0.27
DFFB-209ENST00000477548 ITPRIPQ8IWB1 547 aa16.72■□□□□ 0.27
DFFB-209ENST00000477548 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
DFFB-209ENST00000477548 INO80Q9ULG1 1556 aaPredicted RBP16.72■□□□□ 0.27
DFFB-209ENST00000477548 SSFA2P28290 1259 aa16.72■□□□□ 0.27
DFFB-209ENST00000477548 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
DFFB-209ENST00000477548 MYOM1P52179 1685 aa16.71■□□□□ 0.27
DFFB-209ENST00000477548 GGT6Q6P531 493 aa16.71■□□□□ 0.27
DFFB-209ENST00000477548 ARID3AQ99856 593 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms