RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 WDR43Q15061 677 aaKnown RBP eCLIP29.04■■■□□ 2.24
CCM2-206ENST00000474617 SIRT1Q96EB6 747 aa29.04■■■□□ 2.24
CCM2-206ENST00000474617 POGKQ9P215 609 aa29.04■■■□□ 2.24
CCM2-206ENST00000474617 NGEFQ8N5V2 710 aa29.03■■■□□ 2.24
CCM2-206ENST00000474617 UBR1Q8IWV7 1749 aa29.02■■■□□ 2.24
CCM2-206ENST00000474617 POLR3AO14802 1390 aaPredicted RBP29■■■□□ 2.23
CCM2-206ENST00000474617 KNDC1Q76NI1 1749 aa29■■■□□ 2.23
CCM2-206ENST00000474617 TMEM2Q9UHN6 1383 aa28.99■■■□□ 2.23
CCM2-206ENST00000474617 NRXN3Q9Y4C0 1643 aa28.99■■■□□ 2.23
CCM2-206ENST00000474617 PRAM1Q96QH2 718 aa28.99■■■□□ 2.23
CCM2-206ENST00000474617 SLC12A5Q9H2X9 1139 aa28.99■■■□□ 2.23
CCM2-206ENST00000474617 TECPR2O15040 1411 aa28.98■■■□□ 2.23
CCM2-206ENST00000474617 RNF123Q5XPI4 1314 aa28.98■■■□□ 2.23
CCM2-206ENST00000474617 STK26Q9P289 416 aa28.98■■■□□ 2.23
CCM2-206ENST00000474617 FAM135BQ49AJ0 1406 aa28.97■■■□□ 2.23
CCM2-206ENST00000474617 TERF2IPQ9NYB0 399 aa28.96■■■□□ 2.23
CCM2-206ENST00000474617 MED14O60244 1454 aa28.94■■■□□ 2.22
CCM2-206ENST00000474617 SRPK2P78362 688 aaKnown RBP28.94■■■□□ 2.22
CCM2-206ENST00000474617 MORC1Q86VD1 984 aa28.94■■■□□ 2.22
CCM2-206ENST00000474617 ADAMTS8Q9UP79 889 aa28.91■■■□□ 2.22
CCM2-206ENST00000474617 FER1L4A9Z1Z3 1794 aa28.91■■■□□ 2.22
CCM2-206ENST00000474617 PLEKHG1Q9ULL1 1385 aa28.9■■■□□ 2.22
CCM2-206ENST00000474617 CPS1P31327 1500 aa28.9■■■□□ 2.22
CCM2-206ENST00000474617 CABP2Q9NPB3 220 aa28.89■■■□□ 2.22
CCM2-206ENST00000474617 C3P01024 1663 aa28.89■■■□□ 2.21
CCM2-206ENST00000474617 ATP7BP35670 1465 aa28.88■■■□□ 2.21
CCM2-206ENST00000474617 PPP4R2Q9NY27 417 aa28.88■■■□□ 2.21
CCM2-206ENST00000474617 SLIT1O75093 1534 aa28.88■■■□□ 2.21
CCM2-206ENST00000474617 HDGFL2Q7Z4V5 671 aaPredicted RBP28.86■■■□□ 2.21
CCM2-206ENST00000474617 MINK1Q8N4C8 1332 aaPredicted RBP28.86■■■□□ 2.21
CCM2-206ENST00000474617 A0A1W2PP64 1363 aa28.86■■■□□ 2.21
CCM2-206ENST00000474617 CFAP53Q96M91 514 aa28.85■■■□□ 2.21
CCM2-206ENST00000474617 TRHP20396 242 aaPredicted RBP28.84■■■□□ 2.21
CCM2-206ENST00000474617 ARHGAP23Q9P227 1491 aa28.84■■■□□ 2.21
CCM2-206ENST00000474617 CDK19Q9BWU1 502 aa28.84■■■□□ 2.21
CCM2-206ENST00000474617 ANKRD26Q9UPS8 1709 aa28.83■■■□□ 2.21
CCM2-206ENST00000474617 SAFB2Q14151 953 aaKnown RBP eCLIP28.83■■■□□ 2.215e-8■■■□□ 18
CCM2-206ENST00000474617 EID1Q9Y6B2 187 aa28.82■■■□□ 2.2
CCM2-206ENST00000474617 BCANQ96GW7 911 aa28.81■■■□□ 2.2
CCM2-206ENST00000474617 METP08581 1390 aa28.81■■■□□ 2.2
CCM2-206ENST00000474617 NCBP3Q53F19 620 aaKnown RBP28.8■■■□□ 2.2
CCM2-206ENST00000474617 DIP2AQ14689 1571 aa28.8■■■□□ 2.2
CCM2-206ENST00000474617 CD163L1Q9NR16 1453 aa28.79■■■□□ 2.2
CCM2-206ENST00000474617 ADAMTS13Q76LX8 1427 aa28.78■■■□□ 2.2
CCM2-206ENST00000474617 ZNF521Q96K83 1311 aa28.76■■■□□ 2.19
CCM2-206ENST00000474617 THEMISQ8N1K5 641 aaPredicted RBP28.76■■■□□ 2.19
CCM2-206ENST00000474617 ADGRB2O60241 1585 aa28.76■■■□□ 2.19
CCM2-206ENST00000474617 RCAN3Q9UKA8 241 aa28.75■■■□□ 2.19
CCM2-206ENST00000474617 WASLO00401 505 aaPredicted RBP28.74■■■□□ 2.19
CCM2-206ENST00000474617 SHPRHQ149N8 1683 aa28.73■■■□□ 2.19
CCM2-206ENST00000474617 GOLGA2Q08379 1002 aa28.71■■■□□ 2.19
CCM2-206ENST00000474617 KIF20BQ96Q89 1820 aa28.71■■■□□ 2.19
CCM2-206ENST00000474617 WAPLQ7Z5K2 1190 aa28.7■■■□□ 2.19
CCM2-206ENST00000474617 TXNDC2Q86VQ3 553 aa28.7■■■□□ 2.19
CCM2-206ENST00000474617 PLEKHH1Q9ULM0 1364 aa28.7■■■□□ 2.18
CCM2-206ENST00000474617 TBX22Q9Y458 520 aa28.69■■■□□ 2.18
CCM2-206ENST00000474617 CPSF1Q10570 1443 aaKnown RBP28.68■■■□□ 2.18
CCM2-206ENST00000474617 EDC4Q6P2E9 1401 aaKnown RBP28.68■■■□□ 2.18
CCM2-206ENST00000474617 MTHFSP49914 203 aa28.68■■■□□ 2.18
CCM2-206ENST00000474617 CABP1Q9NZU7 370 aa28.68■■■□□ 2.18
CCM2-206ENST00000474617 RRP1P56182 461 aaKnown RBP28.67■■■□□ 2.18
CCM2-206ENST00000474617 PTCH1Q13635 1447 aa28.66■■■□□ 2.18
CCM2-206ENST00000474617 CDC42BPGQ6DT37 1551 aa28.66■■■□□ 2.18
CCM2-206ENST00000474617 FYB1O15117 783 aa28.65■■■□□ 2.18
CCM2-206ENST00000474617 IRX6P78412 446 aaPredicted RBP28.65■■■□□ 2.18
CCM2-206ENST00000474617 RUNDC1Q96C34 613 aa28.65■■■□□ 2.18
CCM2-206ENST00000474617 SALL2Q9Y467 1007 aaPredicted RBP28.65■■■□□ 2.18
CCM2-206ENST00000474617 LTKP29376 864 aa28.64■■■□□ 2.18
CCM2-206ENST00000474617 CCDC61Q9Y6R9 512 aa28.64■■■□□ 2.18
CCM2-206ENST00000474617 PIK3R4Q99570 1358 aa28.64■■■□□ 2.18
CCM2-206ENST00000474617 PPIP5K1Q6PFW1 1433 aa28.64■■■□□ 2.17
CCM2-206ENST00000474617 CEBPAP49715 358 aaPredicted RBP28.64■■■□□ 2.17
CCM2-206ENST00000474617 ZNF692Q9BU19 519 aaPredicted RBP28.63■■■□□ 2.17
CCM2-206ENST00000474617 SENP3Q9H4L4 574 aaPredicted RBP28.63■■■□□ 2.17
CCM2-206ENST00000474617 E9PSI1 815 aa28.62■■■□□ 2.17
CCM2-206ENST00000474617 CDCA7LQ96GN5 454 aa28.61■■■□□ 2.17
CCM2-206ENST00000474617 CEP170BQ9Y4F5 1589 aaPredicted RBP28.61■■■□□ 2.17
CCM2-206ENST00000474617 TRMT2AQ8IZ69 625 aaKnown RBP28.6■■■□□ 2.17
CCM2-206ENST00000474617 ROBO2Q9HCK4 1378 aa28.6■■■□□ 2.17
CCM2-206ENST00000474617 APAF1O14727 1248 aa28.59■■■□□ 2.17
CCM2-206ENST00000474617 SLFN5Q08AF3 891 aa28.59■■■□□ 2.17
CCM2-206ENST00000474617 CCDC27Q2M243 656 aa28.59■■■□□ 2.17
CCM2-206ENST00000474617 NUDT16Q96DE0 195 aaKnown RBP28.59■■■□□ 2.17
CCM2-206ENST00000474617 PNNQ9H307 717 aaKnown RBP28.59■■■□□ 2.17
CCM2-206ENST00000474617 MON2Q7Z3U7 1717 aa28.59■■■□□ 2.17
CCM2-206ENST00000474617 DUSP27Q5VZP5 1158 aa28.59■■■□□ 2.17
CCM2-206ENST00000474617 IQSEC2Q5JU85 1478 aa28.58■■■□□ 2.17
CCM2-206ENST00000474617 TNNT2P45379 298 aaPredicted RBP28.58■■■□□ 2.17
CCM2-206ENST00000474617 PNPLA6Q8IY17 1366 aa28.58■■■□□ 2.17
CCM2-206ENST00000474617 ZNF142P52746 1687 aaPredicted RBP28.57■■■□□ 2.16
CCM2-206ENST00000474617 AKAP12Q02952 1782 aa28.56■■■□□ 2.16
CCM2-206ENST00000474617 COL3A1P02461 1466 aaPredicted RBP28.56■■■□□ 2.16
CCM2-206ENST00000474617 GGNBP2Q9H3C7 697 aa28.56■■■□□ 2.16
CCM2-206ENST00000474617 ITSN1Q15811 1721 aa28.56■■■□□ 2.16
CCM2-206ENST00000474617 CCDC146Q8IYE0 955 aa28.55■■■□□ 2.16
CCM2-206ENST00000474617 ADAMTSL3P82987 1691 aa28.55■■■□□ 2.16
CCM2-206ENST00000474617 NKTRP30414 1462 aaKnown RBP28.54■■■□□ 2.16
CCM2-206ENST00000474617 RIMS1Q86UR5 1692 aaKnown RBP28.54■■■□□ 2.16
CCM2-206ENST00000474617 TOPAZ1Q8N9V7 1692 aa28.54■■■□□ 2.16
CCM2-206ENST00000474617 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms