RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ZNF467Q7Z7K2 595 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-208ENST00000474246 CCDC82Q8N4S0 544 aa8.32□□□□□ -1.08
SMARCE1-208ENST00000474246 CNTLNQ9NXG0 1405 aa8.32□□□□□ -1.08
SMARCE1-208ENST00000474246 KDM5CP41229 1560 aa8.31□□□□□ -1.08
SMARCE1-208ENST00000474246 NEFMP07197 916 aa8.31□□□□□ -1.08
SMARCE1-208ENST00000474246 CD44P16070 742 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-208ENST00000474246 CANXP27824 592 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-208ENST00000474246 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-208ENST00000474246 MAP3K13O43283 966 aa8.3□□□□□ -1.08
SMARCE1-208ENST00000474246 FAM161AQ3B820 660 aa8.3□□□□□ -1.08
SMARCE1-208ENST00000474246 SGIP1Q9BQI5 828 aa8.3□□□□□ -1.08
SMARCE1-208ENST00000474246 NAP1L2Q9ULW6 460 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-208ENST00000474246 TNS2Q63HR2 1409 aa8.3□□□□□ -1.08
SMARCE1-208ENST00000474246 ABCA8O94911 1581 aa8.3□□□□□ -1.08
SMARCE1-208ENST00000474246 RTEL1-TNFRSF6BF6WH68 1400 aa8.29□□□□□ -1.08
SMARCE1-208ENST00000474246 PTMAP06454 111 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-208ENST00000474246 GPATCH11Q8N954 259 aa8.29□□□□□ -1.08
SMARCE1-208ENST00000474246 GTPBP6O43824 516 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1-208ENST00000474246 HSP90AB4PQ58FF6 505 aa8.29□□□□□ -1.08
SMARCE1-208ENST00000474246 DEFB132Q7Z7B7 95 aa8.29□□□□□ -1.08
SMARCE1-208ENST00000474246 IFNL1Q8IU54 200 aa8.29□□□□□ -1.08
SMARCE1-208ENST00000474246 EXOC8Q8IYI6 725 aa8.29□□□□□ -1.08
SMARCE1-208ENST00000474246 CCDC88BA6NC98 1476 aa8.28□□□□□ -1.08
SMARCE1-208ENST00000474246 LRRC9Q6ZRR7 1453 aa8.28□□□□□ -1.08
SMARCE1-208ENST00000474246 ZNF142P52746 1687 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-208ENST00000474246 PDAP1Q13442 181 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-208ENST00000474246 IPO4Q8TEX9 1081 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-208ENST00000474246 KIF12Q96FN5 646 aa8.28□□□□□ -1.08
SMARCE1-208ENST00000474246 PHF12Q96QT6 1004 aa8.28□□□□□ -1.08
SMARCE1-208ENST00000474246 RICTORQ6R327 1708 aa8.28□□□□□ -1.08
SMARCE1-208ENST00000474246 SUPT6HQ7KZ85 1726 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-208ENST00000474246 APLP1P51693 650 aa8.27□□□□□ -1.08
SMARCE1-208ENST00000474246 SALL2Q9Y467 1007 aaPredicted RBP8.27□□□□□ -1.08
SMARCE1-208ENST00000474246 PSEN1P49768 467 aa8.27□□□□□ -1.09
SMARCE1-208ENST00000474246 ZNF579Q8NAF0 562 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-208ENST00000474246 PITPNM2Q9BZ72 1349 aa8.27□□□□□ -1.09
SMARCE1-208ENST00000474246 ZNF316A6NFI3 1004 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-208ENST00000474246 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
SMARCE1-208ENST00000474246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMARCE1-208ENST00000474246 DEKP35659 375 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-208ENST00000474246 LOC102724159A0A0B4J2E5 919 aa8.25□□□□□ -1.09
SMARCE1-208ENST00000474246 MLLT1Q03111 559 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-208ENST00000474246 PWP2Q15269 919 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-208ENST00000474246 WWC1Q8IX03 1113 aa8.25□□□□□ -1.09
SMARCE1-208ENST00000474246 CEP170BQ9Y4F5 1589 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-208ENST00000474246 PHLPP1O60346 1717 aa8.24□□□□□ -1.09
SMARCE1-208ENST00000474246 PLEKHD1A6NEE1 506 aa8.24□□□□□ -1.09
SMARCE1-208ENST00000474246 R3HDM1Q15032 1099 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-208ENST00000474246 ROBO1Q9Y6N7 1651 aa8.24□□□□□ -1.09
SMARCE1-208ENST00000474246 ABCA9Q8IUA7 1624 aa8.24□□□□□ -1.09
SMARCE1-208ENST00000474246 FAM83GA6ND36 823 aa8.24□□□□□ -1.09
SMARCE1-208ENST00000474246 SECISBP2LQ93073 1101 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-208ENST00000474246 SCAF11Q99590 1463 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-208ENST00000474246 BAG6P46379 1132 aa8.23□□□□□ -1.09
SMARCE1-208ENST00000474246 ANKLE2Q86XL3 938 aa8.23□□□□□ -1.09
SMARCE1-208ENST00000474246 SLC24A3Q9HC58 644 aa8.23□□□□□ -1.09
SMARCE1-208ENST00000474246 GABBR2O75899 941 aa8.23□□□□□ -1.09
SMARCE1-208ENST00000474246 CHD4Q14839 1912 aa8.22□□□□□ -1.09
SMARCE1-208ENST00000474246 MPNDQ8N594 471 aa8.22□□□□□ -1.09
SMARCE1-208ENST00000474246 RIPOR2Q9Y4F9 1068 aa8.22□□□□□ -1.09
SMARCE1-208ENST00000474246 ANKRD13AQ8IZ07 590 aa8.21□□□□□ -1.09
SMARCE1-208ENST00000474246 KDM5DQ9BY66 1539 aa8.21□□□□□ -1.09
SMARCE1-208ENST00000474246 FAM43BQ6ZT52 329 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-208ENST00000474246 DNAJC5GQ8N7S2 189 aa8.21□□□□□ -1.1
SMARCE1-208ENST00000474246 FBXW7Q969H0 707 aa8.21□□□□□ -1.1
SMARCE1-208ENST00000474246 AGLP35573 1532 aa8.21□□□□□ -1.1
SMARCE1-208ENST00000474246 POLR1AO95602 1720 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-208ENST00000474246 C19orf67A6NJJ6 358 aa8.2□□□□□ -1.1
SMARCE1-208ENST00000474246 FTSJ3Q8IY81 847 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-208ENST00000474246 NEURL4Q96JN8 1562 aa8.2□□□□□ -1.1
SMARCE1-208ENST00000474246 JMYQ8N9B5 988 aa8.2□□□□□ -1.1
SMARCE1-208ENST00000474246 SPON1Q9HCB6 807 aa8.2□□□□□ -1.1
SMARCE1-208ENST00000474246 NPHP4O75161 1426 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-208ENST00000474246 NOL8Q76FK4 1167 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-208ENST00000474246 CABP2Q9NPB3 220 aa8.19□□□□□ -1.1
SMARCE1-208ENST00000474246 TRPC5Q9UL62 973 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-208ENST00000474246 MYO3AQ8NEV4 1616 aa8.18□□□□□ -1.1
SMARCE1-208ENST00000474246 RALGAPBQ86X10 1494 aa8.18□□□□□ -1.1
SMARCE1-208ENST00000474246 ZC3H15Q8WU90 426 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-208ENST00000474246 AMOTL2Q9Y2J4 779 aa8.18□□□□□ -1.1
SMARCE1-208ENST00000474246 HECW1Q76N89 1606 aa8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 MKRN3Q13064 507 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 MS4A3Q96HJ5 214 aa8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 WDR70Q9NW82 654 aa8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 TRPC6Q9Y210 931 aa8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 LAS1LQ9Y4W2 734 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 CEP350Q5VT06 3117 aa8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 SHPRHQ149N8 1683 aa8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 CFAP74Q9C0B2 1584 aa8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 OS9Q13438 667 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 EFCAB3Q8N7B9 438 aa8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 WRNQ14191 1432 aaPredicted RBP eCLIP8.17□□□□□ -1.1
SMARCE1-208ENST00000474246 A2ML1A8K2U0 1454 aa8.16□□□□□ -1.1
SMARCE1-208ENST00000474246 MED14O60244 1454 aa8.16□□□□□ -1.1
SMARCE1-208ENST00000474246 TMTC2Q8N394 836 aa8.16□□□□□ -1.1
SMARCE1-208ENST00000474246 MFRPQ9BY79 579 aa8.16□□□□□ -1.1
SMARCE1-208ENST00000474246 MYH16Q9H6N6 1097 aa8.16□□□□□ -1.1
SMARCE1-208ENST00000474246 RYDENQ9NUL5 291 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-208ENST00000474246 DLL1O00548 723 aa8.15□□□□□ -1.1
SMARCE1-208ENST00000474246 SMARCA5O60264 1052 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms