RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 CFAP43Q8NDM7 1665 aa7.55□□□□□ -1.2
LRCH3-214ENST00000473177 TRIM6-TRIM34B2RNG4 842 aa7.55□□□□□ -1.2
LRCH3-214ENST00000473177 PSEN2P49810 448 aa7.55□□□□□ -1.2
LRCH3-214ENST00000473177 METTL3Q86U44 580 aaKnown RBP7.55□□□□□ -1.2
LRCH3-214ENST00000473177 ZBED2Q9BTP6 218 aa7.55□□□□□ -1.2
LRCH3-214ENST00000473177 TSKSQ9UJT2 592 aa7.55□□□□□ -1.2
LRCH3-214ENST00000473177 FAM161AQ3B820 660 aa7.54□□□□□ -1.2
LRCH3-214ENST00000473177 PXYLP1Q8TE99 480 aa7.54□□□□□ -1.2
LRCH3-214ENST00000473177 SLC4A5Q9BY07 1137 aa7.54□□□□□ -1.2
LRCH3-214ENST00000473177 ARAP3Q8WWN8 1544 aa7.53□□□□□ -1.2
LRCH3-214ENST00000473177 DISP1Q96F81 1524 aa7.53□□□□□ -1.2
LRCH3-214ENST00000473177 PROX2Q3B8N5 592 aa7.53□□□□□ -1.2
LRCH3-214ENST00000473177 PACS2Q86VP3 889 aa7.53□□□□□ -1.2
LRCH3-214ENST00000473177 PARP9Q8IXQ6 854 aa7.53□□□□□ -1.2
LRCH3-214ENST00000473177 RBM46Q8TBY0 533 aaKnown RBP7.53□□□□□ -1.2
LRCH3-214ENST00000473177 PHOX2BQ99453 314 aa7.53□□□□□ -1.2
LRCH3-214ENST00000473177 GPBP1L1Q9HC44 474 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-214ENST00000473177 CARMIL1Q5VZK9 1371 aa7.53□□□□□ -1.2
LRCH3-214ENST00000473177 BCORL1Q5H9F3 1711 aa7.52□□□□□ -1.2
LRCH3-214ENST00000473177 RAPGEF3O95398 923 aa7.52□□□□□ -1.21
LRCH3-214ENST00000473177 KDM4CQ9H3R0 1056 aa7.52□□□□□ -1.21
LRCH3-214ENST00000473177 AXIN2Q9Y2T1 843 aa7.52□□□□□ -1.21
LRCH3-214ENST00000473177 RIMS1Q86UR5 1692 aaKnown RBP7.51□□□□□ -1.21
LRCH3-214ENST00000473177 PHLDB1Q86UU1 1377 aa7.51□□□□□ -1.21
LRCH3-214ENST00000473177 NBPF26B4DH59 902 aa7.51□□□□□ -1.21
LRCH3-214ENST00000473177 CLCN1P35523 988 aa7.51□□□□□ -1.21
LRCH3-214ENST00000473177 DMRTA1Q5VZB9 504 aa7.51□□□□□ -1.21
LRCH3-214ENST00000473177 EYA1Q99502 592 aa7.51□□□□□ -1.21
LRCH3-214ENST00000473177 TMUB1Q9BVT8 246 aa7.51□□□□□ -1.21
LRCH3-214ENST00000473177 POGZQ7Z3K3 1410 aa7.51□□□□□ -1.21
LRCH3-214ENST00000473177 TTLL12Q14166 644 aaPredicted RBP7.5□□□□□ -1.21
LRCH3-214ENST00000473177 TMEM132AQ24JP5 1023 aa7.5□□□□□ -1.21
LRCH3-214ENST00000473177 NUDT18Q6ZVK8 323 aa7.5□□□□□ -1.21
LRCH3-214ENST00000473177 TATDN2Q93075 761 aa7.5□□□□□ -1.21
LRCH3-214ENST00000473177 RABGEF1Q9UJ41 708 aa7.5□□□□□ -1.21
LRCH3-214ENST00000473177 KIAA0556O60303 1618 aa7.49□□□□□ -1.21
LRCH3-214ENST00000473177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.49□□□□□ -1.21
LRCH3-214ENST00000473177 C3orf80F5H4A9 247 aa7.49□□□□□ -1.21
LRCH3-214ENST00000473177 MDM2Q00987 491 aaPredicted RBP7.49□□□□□ -1.21
LRCH3-214ENST00000473177 GPCPD1Q9NPB8 672 aa7.49□□□□□ -1.21
LRCH3-214ENST00000473177 KIAA1468Q9P260 1216 aa7.49□□□□□ -1.21
LRCH3-214ENST00000473177 PNMA3Q9UL41 463 aa7.49□□□□□ -1.21
LRCH3-214ENST00000473177 UGGT2Q9NYU1 1516 aa7.48□□□□□ -1.21
LRCH3-214ENST00000473177 TK2O00142 265 aa7.48□□□□□ -1.21
LRCH3-214ENST00000473177 GIGYF2Q6Y7W6 1299 aaKnown RBP7.48□□□□□ -1.21
LRCH3-214ENST00000473177 REPIN1Q9BWE0 567 aaKnown RBP7.48□□□□□ -1.21
LRCH3-214ENST00000473177 DAXXQ9UER7 740 aaPredicted RBP7.48□□□□□ -1.21
LRCH3-214ENST00000473177 YEATS2Q9ULM3 1422 aa7.48□□□□□ -1.21
LRCH3-214ENST00000473177 VPS9D1Q9Y2B5 631 aa7.48□□□□□ -1.21
LRCH3-214ENST00000473177 FANCAO15360 1455 aa7.48□□□□□ -1.21
LRCH3-214ENST00000473177 RCCD1A6NED2 376 aa7.47□□□□□ -1.21
LRCH3-214ENST00000473177 ARID3CA6NKF2 412 aa7.47□□□□□ -1.21
LRCH3-214ENST00000473177 MLECQ14165 292 aa7.47□□□□□ -1.21
LRCH3-214ENST00000473177 FAM9AQ8IZU1 332 aaPredicted RBP7.47□□□□□ -1.21
LRCH3-214ENST00000473177 ARHGEF40Q8TER5 1519 aa7.47□□□□□ -1.21
LRCH3-214ENST00000473177 DNAJB2P25686 324 aa7.46□□□□□ -1.22
LRCH3-214ENST00000473177 NLRP7Q8WX94 980 aa7.46□□□□□ -1.22
LRCH3-214ENST00000473177 NEO1Q92859 1461 aa7.46□□□□□ -1.22
LRCH3-214ENST00000473177 AKNAQ7Z591 1439 aa7.45□□□□□ -1.22
LRCH3-214ENST00000473177 SMAPO00193 183 aa7.45□□□□□ -1.22
LRCH3-214ENST00000473177 ADGRD1Q6QNK2 874 aa7.45□□□□□ -1.22
LRCH3-214ENST00000473177 TMEM134Q9H6X4 195 aa7.45□□□□□ -1.22
LRCH3-214ENST00000473177 GOLGA3Q08378 1498 aa7.44□□□□□ -1.22
LRCH3-214ENST00000473177 BHMG1C9JSJ3 638 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-214ENST00000473177 MS4A1P11836 297 aa7.44□□□□□ -1.22
LRCH3-214ENST00000473177 DDRGK1Q96HY6 314 aa7.44□□□□□ -1.22
LRCH3-214ENST00000473177 FAM117AQ9C073 453 aa7.44□□□□□ -1.22
LRCH3-214ENST00000473177 NBPF3Q9H094 633 aa7.44□□□□□ -1.22
LRCH3-214ENST00000473177 FAM217BQ9NTX9 383 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-214ENST00000473177 FRMPD1Q5SYB0 1578 aa7.44□□□□□ -1.22
LRCH3-214ENST00000473177 UHRF1BP1Q6BDS2 1440 aa7.44□□□□□ -1.22
LRCH3-214ENST00000473177 DENND4BO75064 1496 aaPredicted RBP7.43□□□□□ -1.22
LRCH3-214ENST00000473177 ABCA8O94911 1581 aa7.43□□□□□ -1.22
LRCH3-214ENST00000473177 SSTR3P32745 418 aaPredicted RBP7.43□□□□□ -1.22
LRCH3-214ENST00000473177 FAM98CQ17RN3 349 aaKnown RBP7.43□□□□□ -1.22
LRCH3-214ENST00000473177 LAPTM4BQ86VI4 370 aa7.43□□□□□ -1.22
LRCH3-214ENST00000473177 HCSTQ9UBK5 93 aa7.43□□□□□ -1.22
LRCH3-214ENST00000473177 IQSEC2Q5JU85 1478 aa7.43□□□□□ -1.22
LRCH3-214ENST00000473177 UBAP1LF5GYI3 381 aa7.42□□□□□ -1.22
LRCH3-214ENST00000473177 IL27Q8NEV9 243 aa7.42□□□□□ -1.22
LRCH3-214ENST00000473177 SEPT9Q9UHD8 586 aaPredicted RBP7.42□□□□□ -1.22
LRCH3-214ENST00000473177 RAPGEF2Q9Y4G8 1499 aa7.42□□□□□ -1.22
LRCH3-214ENST00000473177 TTC37Q6PGP7 1564 aa7.42□□□□□ -1.22
LRCH3-214ENST00000473177 ABCA9Q8IUA7 1624 aa7.41□□□□□ -1.22
LRCH3-214ENST00000473177 PLEKHG3A1L390 1219 aa7.41□□□□□ -1.22
LRCH3-214ENST00000473177 HRO43593 1189 aa7.41□□□□□ -1.22
LRCH3-214ENST00000473177 PTPRTO14522 1441 aa7.41□□□□□ -1.22
LRCH3-214ENST00000473177 EFCAB5A4FU69 1503 aa7.41□□□□□ -1.22
LRCH3-214ENST00000473177 ZFYVE16Q7Z3T8 1539 aa7.41□□□□□ -1.22
LRCH3-214ENST00000473177 PREX1Q8TCU6 1659 aa7.41□□□□□ -1.22
LRCH3-214ENST00000473177 CEBPAP49715 358 aaPredicted RBP7.4□□□□□ -1.22
LRCH3-214ENST00000473177 SULF1Q8IWU6 871 aa7.4□□□□□ -1.22
LRCH3-214ENST00000473177 MRPL50Q8N5N7 158 aaKnown RBP7.39□□□□□ -1.23
LRCH3-214ENST00000473177 FER1L4A9Z1Z3 1794 aa7.38□□□□□ -1.23
LRCH3-214ENST00000473177 ATP10BO94823 1461 aa7.38□□□□□ -1.23
LRCH3-214ENST00000473177 FHOD3Q2V2M9 1422 aa7.38□□□□□ -1.23
LRCH3-214ENST00000473177 CD46P15529 392 aa7.38□□□□□ -1.23
LRCH3-214ENST00000473177 STAC3Q96MF2 364 aa7.38□□□□□ -1.23
LRCH3-214ENST00000473177 BEGAINQ9BUH8 593 aa7.38□□□□□ -1.23
LRCH3-214ENST00000473177 PLA2G2EQ9NZK7 142 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms