RNA–Protein interactions for RNA: ENST00000470736.1

UBE4B-207, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-207ENST00000470736 PTPRMP28827 1452 aa8.24□□□□□ -1.09
UBE4B-207ENST00000470736 GGT6Q6P531 493 aa8.23□□□□□ -1.09
UBE4B-207ENST00000470736 SLC4A5Q9BY07 1137 aa8.23□□□□□ -1.09
UBE4B-207ENST00000470736 ADGBQ8N7X0 1667 aa8.23□□□□□ -1.09
UBE4B-207ENST00000470736 PTPN23Q9H3S7 1636 aa8.22□□□□□ -1.09
UBE4B-207ENST00000470736 MIA2Q96PC5 1412 aa8.22□□□□□ -1.09
UBE4B-207ENST00000470736 A2MP01023 1474 aa8.22□□□□□ -1.09
UBE4B-207ENST00000470736 MBD5Q9P267 1494 aa8.22□□□□□ -1.09
UBE4B-207ENST00000470736 RSPH4AQ5TD94 716 aa8.22□□□□□ -1.09
UBE4B-207ENST00000470736 FGD6Q6ZV73 1430 aa8.21□□□□□ -1.09
UBE4B-207ENST00000470736 DSG2Q14126 1118 aa8.21□□□□□ -1.1
UBE4B-207ENST00000470736 ARHGEF5Q12774 1597 aa8.21□□□□□ -1.1
UBE4B-207ENST00000470736 REREQ9P2R6 1566 aa8.21□□□□□ -1.1
UBE4B-207ENST00000470736 KIF3BO15066 747 aa8.2□□□□□ -1.1
UBE4B-207ENST00000470736 ITGAEP38570 1179 aa8.2□□□□□ -1.1
UBE4B-207ENST00000470736 CEBPAP49715 358 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-207ENST00000470736 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
UBE4B-207ENST00000470736 OXER1Q8TDS5 423 aa8.2□□□□□ -1.1
UBE4B-207ENST00000470736 CHIC2Q9UKJ5 165 aa8.2□□□□□ -1.1
UBE4B-207ENST00000470736 RTEL1-TNFRSF6BF6WH68 1400 aa8.2□□□□□ -1.1
UBE4B-207ENST00000470736 RGS20O76081 388 aa8.19□□□□□ -1.1
UBE4B-207ENST00000470736 PSEN2P49810 448 aa8.19□□□□□ -1.1
UBE4B-207ENST00000470736 AGLP35573 1532 aa8.19□□□□□ -1.1
UBE4B-207ENST00000470736 IFFO2Q5TF58 517 aa8.18□□□□□ -1.1
UBE4B-207ENST00000470736 RRP7BPQ9NSQ0 103 aa8.18□□□□□ -1.1
UBE4B-207ENST00000470736 CROCC2H7BZ55 1655 aa8.18□□□□□ -1.1
UBE4B-207ENST00000470736 CLTCQ00610 1675 aaKnown RBP8.18□□□□□ -1.1
UBE4B-207ENST00000470736 BCL2L12Q9HB09 334 aa8.17□□□□□ -1.1
UBE4B-207ENST00000470736 DHX29Q7Z478 1369 aaKnown RBP8.17□□□□□ -1.1
UBE4B-207ENST00000470736 DAPK1P53355 1430 aa8.17□□□□□ -1.1
UBE4B-207ENST00000470736 PLXNC1O60486 1568 aa8.17□□□□□ -1.1
UBE4B-207ENST00000470736 DNMT1P26358 1616 aaKnown RBP8.17□□□□□ -1.1
UBE4B-207ENST00000470736 C3P01024 1663 aa8.16□□□□□ -1.1
UBE4B-207ENST00000470736 HSPA2P54652 639 aa8.16□□□□□ -1.1
UBE4B-207ENST00000470736 KCNK17Q96T54 332 aa8.16□□□□□ -1.1
UBE4B-207ENST00000470736 CRISPLD2Q9H0B8 497 aa8.16□□□□□ -1.1
UBE4B-207ENST00000470736 CNTLNQ9NXG0 1405 aa8.16□□□□□ -1.1
UBE4B-207ENST00000470736 VPS9D1Q9Y2B5 631 aa8.16□□□□□ -1.1
UBE4B-207ENST00000470736 MAST1Q9Y2H9 1570 aa8.15□□□□□ -1.1
UBE4B-207ENST00000470736 TCOF1Q13428 1488 aaKnown RBP8.15□□□□□ -1.1
UBE4B-207ENST00000470736 ABCC5O15440 1437 aa8.15□□□□□ -1.1
UBE4B-207ENST00000470736 ANKRD30AQ9BXX3 1397 aa8.15□□□□□ -1.1
UBE4B-207ENST00000470736 KIF15Q9NS87 1388 aa8.15□□□□□ -1.1
UBE4B-207ENST00000470736 WASHC2CQ9Y4E1 1318 aa8.15□□□□□ -1.1
UBE4B-207ENST00000470736 MYT1Q01538 1121 aa8.15□□□□□ -1.1
UBE4B-207ENST00000470736 KCTD12Q96CX2 325 aaKnown RBP8.15□□□□□ -1.1
UBE4B-207ENST00000470736 SHANK2Q9UPX8 1470 aa8.14□□□□□ -1.11
UBE4B-207ENST00000470736 PREX1Q8TCU6 1659 aa8.14□□□□□ -1.11
UBE4B-207ENST00000470736 DUOX2Q9NRD8 1548 aa8.13□□□□□ -1.11
UBE4B-207ENST00000470736 UHRF1BP1Q6BDS2 1440 aa8.13□□□□□ -1.11
UBE4B-207ENST00000470736 CHGAP10645 457 aaKnown RBP8.13□□□□□ -1.11
UBE4B-207ENST00000470736 PDE4AP27815 886 aa8.13□□□□□ -1.11
UBE4B-207ENST00000470736 ANO8Q9HCE9 1232 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-207ENST00000470736 MROH2AA6NES4 1674 aa8.13□□□□□ -1.11
UBE4B-207ENST00000470736 ZMYM3Q14202 1370 aa8.12□□□□□ -1.11
UBE4B-207ENST00000470736 PTPREP23469 700 aa8.12□□□□□ -1.11
UBE4B-207ENST00000470736 FOSBP53539 338 aa8.12□□□□□ -1.11
UBE4B-207ENST00000470736 PPP1R15BQ5SWA1 713 aa8.12□□□□□ -1.11
UBE4B-207ENST00000470736 ZNF454Q8N9F8 522 aa8.12□□□□□ -1.11
UBE4B-207ENST00000470736 KDM5DQ9BY66 1539 aa8.12□□□□□ -1.11
UBE4B-207ENST00000470736 LMTK3Q96Q04 1460 aa8.12□□□□□ -1.11
UBE4B-207ENST00000470736 KANK1Q14678 1352 aa8.11□□□□□ -1.11
UBE4B-207ENST00000470736 EIF2AK4Q9P2K8 1649 aaKnown RBP8.11□□□□□ -1.11
UBE4B-207ENST00000470736 CEP152O94986 1710 aa8.11□□□□□ -1.11
UBE4B-207ENST00000470736 ERBINQ96RT1 1412 aa8.1□□□□□ -1.11
UBE4B-207ENST00000470736 RNF17Q9BXT8 1623 aaKnown RBP8.1□□□□□ -1.11
UBE4B-207ENST00000470736 BHMG1C9JSJ3 638 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-207ENST00000470736 NBPF3Q9H094 633 aa8.09□□□□□ -1.11
UBE4B-207ENST00000470736 ZC3H13Q5T200 1668 aaKnown RBP8.08□□□□□ -1.12
UBE4B-207ENST00000470736 SETD1BQ9UPS6 1966 aaKnown RBP8.08□□□□□ -1.12
UBE4B-207ENST00000470736 MYO3AQ8NEV4 1616 aa8.08□□□□□ -1.12
UBE4B-207ENST00000470736 CFAP65Q6ZU64 1925 aaKnown RBP8.08□□□□□ -1.12
UBE4B-207ENST00000470736 FBXO31Q5XUX0 539 aaPredicted RBP8.08□□□□□ -1.12
UBE4B-207ENST00000470736 NPATQ14207 1427 aa8.08□□□□□ -1.12
UBE4B-207ENST00000470736 NCOA1Q15788 1441 aa8.08□□□□□ -1.12
UBE4B-207ENST00000470736 TNRQ92752 1358 aa8.08□□□□□ -1.12
UBE4B-207ENST00000470736 ABCC3O15438 1527 aa8.08□□□□□ -1.12
UBE4B-207ENST00000470736 CAMSAP1Q5T5Y3 1602 aa8.07□□□□□ -1.12
UBE4B-207ENST00000470736 PTPRKQ15262 1439 aa8.07□□□□□ -1.12
UBE4B-207ENST00000470736 ANKRD50Q9ULJ7 1429 aa8.07□□□□□ -1.12
UBE4B-207ENST00000470736 GOLGA8CPA6NN73 597 aa8.07□□□□□ -1.12
UBE4B-207ENST00000470736 NKX1-1Q15270 411 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-207ENST00000470736 THSD4Q6ZMP0 1018 aa8.07□□□□□ -1.12
UBE4B-207ENST00000470736 UPF1Q92900 1129 aaKnown RBP eCLIP8.07□□□□□ -1.12
UBE4B-207ENST00000470736 ZDHHC16Q969W1 377 aa8.07□□□□□ -1.12
UBE4B-207ENST00000470736 ZBED2Q9BTP6 218 aa8.07□□□□□ -1.12
UBE4B-207ENST00000470736 FAM135AQ9P2D6 1515 aa8.07□□□□□ -1.12
UBE4B-207ENST00000470736 ADGRL2O95490 1459 aa8.06□□□□□ -1.12
UBE4B-207ENST00000470736 PZPP20742 1482 aa8.06□□□□□ -1.12
UBE4B-207ENST00000470736 MRPL50Q8N5N7 158 aaKnown RBP8.06□□□□□ -1.12
UBE4B-207ENST00000470736 MROH1Q8NDA8 1641 aa8.06□□□□□ -1.12
UBE4B-207ENST00000470736 CEP170BQ9Y4F5 1589 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-207ENST00000470736 PRDM15P57071 1507 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-207ENST00000470736 RRBP1Q9P2E9 1410 aaKnown RBP8.04□□□□□ -1.12
UBE4B-207ENST00000470736 EVI5O60447 810 aa8.04□□□□□ -1.12
UBE4B-207ENST00000470736 PTPN5P54829 565 aa8.04□□□□□ -1.12
UBE4B-207ENST00000470736 NCKAP5LQ9HCH0 1330 aa8.03□□□□□ -1.12
UBE4B-207ENST00000470736 DEPDC5O75140 1603 aa8.03□□□□□ -1.12
UBE4B-207ENST00000470736 ZNF142P52746 1687 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-207ENST00000470736 A2ML1A8K2U0 1454 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms