RNA–Protein interactions for RNA: ENST00000470736.1

UBE4B-207, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-207ENST00000470736 AEBP2Q6ZN18 517 aaPredicted RBP19.79■□□□□ 0.76
UBE4B-207ENST00000470736 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
UBE4B-207ENST00000470736 SENP3Q9H4L4 574 aaPredicted RBP17.09■□□□□ 0.33
UBE4B-207ENST00000470736 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
UBE4B-207ENST00000470736 FOXD1Q16676 465 aa15.81■□□□□ 0.12
UBE4B-207ENST00000470736 MSH5O43196 834 aa15.02■□□□□ -0
UBE4B-207ENST00000470736 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
UBE4B-207ENST00000470736 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
UBE4B-207ENST00000470736 PIAS4Q8N2W9 510 aaPredicted RBP14.77□□□□□ -0.05
UBE4B-207ENST00000470736 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
UBE4B-207ENST00000470736 ADRA2BP18089 450 aa14.55□□□□□ -0.08
UBE4B-207ENST00000470736 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
UBE4B-207ENST00000470736 DMRT2Q9Y5R5 561 aa13.5□□□□□ -0.25
UBE4B-207ENST00000470736 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
UBE4B-207ENST00000470736 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
UBE4B-207ENST00000470736 HOXD11P31277 338 aaPredicted RBP12.97□□□□□ -0.33
UBE4B-207ENST00000470736 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
UBE4B-207ENST00000470736 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
UBE4B-207ENST00000470736 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
UBE4B-207ENST00000470736 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
UBE4B-207ENST00000470736 NISCHQ9Y2I1 1504 aa12.81□□□□□ -0.36
UBE4B-207ENST00000470736 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
UBE4B-207ENST00000470736 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
UBE4B-207ENST00000470736 NCBP3Q53F19 620 aaKnown RBP12.63□□□□□ -0.39
UBE4B-207ENST00000470736 C1QBPQ07021 282 aaKnown RBP12.61□□□□□ -0.39
UBE4B-207ENST00000470736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.31□□□□□ -0.44
UBE4B-207ENST00000470736 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
UBE4B-207ENST00000470736 U3KPZ7 1027 aaPredicted RBP11.99□□□□□ -0.49
UBE4B-207ENST00000470736 KCNA4P22459 653 aa11.88□□□□□ -0.51
UBE4B-207ENST00000470736 APLP2Q06481 763 aa11.88□□□□□ -0.51
UBE4B-207ENST00000470736 CAPN15O75808 1086 aa11.85□□□□□ -0.51
UBE4B-207ENST00000470736 DSG3P32926 999 aa11.84□□□□□ -0.51
UBE4B-207ENST00000470736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
UBE4B-207ENST00000470736 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
UBE4B-207ENST00000470736 SPINK5Q9NQ38 1064 aaPredicted RBP11.8□□□□□ -0.52
UBE4B-207ENST00000470736 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
UBE4B-207ENST00000470736 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
UBE4B-207ENST00000470736 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
UBE4B-207ENST00000470736 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
UBE4B-207ENST00000470736 POTEHQ6S545 545 aa11.56□□□□□ -0.56
UBE4B-207ENST00000470736 ABCB7O75027 752 aa11.48□□□□□ -0.57
UBE4B-207ENST00000470736 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
UBE4B-207ENST00000470736 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
UBE4B-207ENST00000470736 CCDC180Q9P1Z9 1646 aa11.42□□□□□ -0.58
UBE4B-207ENST00000470736 ABCC9O60706 1549 aa11.28□□□□□ -0.6
UBE4B-207ENST00000470736 POLA2Q14181 598 aa11.27□□□□□ -0.61
UBE4B-207ENST00000470736 SLC4A1APQ9BWU0 796 aaKnown RBP11.26□□□□□ -0.61
UBE4B-207ENST00000470736 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
UBE4B-207ENST00000470736 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
UBE4B-207ENST00000470736 CHRDL2Q6WN34 429 aa11.13□□□□□ -0.63
UBE4B-207ENST00000470736 AKT1S1Q96B36 256 aa11.1□□□□□ -0.63
UBE4B-207ENST00000470736 ATXN8OSP0DMR3 200 aa11.02□□□□□ -0.65
UBE4B-207ENST00000470736 ATF5Q9Y2D1 282 aaPredicted RBP11.02□□□□□ -0.65
UBE4B-207ENST00000470736 REM2Q8IYK8 340 aaPredicted RBP10.91□□□□□ -0.66
UBE4B-207ENST00000470736 DCAF8L2P0C7V8 631 aa10.9□□□□□ -0.66
UBE4B-207ENST00000470736 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
UBE4B-207ENST00000470736 ZBTB22O15209 634 aa10.88□□□□□ -0.67
UBE4B-207ENST00000470736 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
UBE4B-207ENST00000470736 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
UBE4B-207ENST00000470736 FBLN2P98095 1184 aa10.81□□□□□ -0.68
UBE4B-207ENST00000470736 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
UBE4B-207ENST00000470736 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
UBE4B-207ENST00000470736 RB1CC1Q8TDY2 1594 aa10.79□□□□□ -0.68
UBE4B-207ENST00000470736 SP7Q8TDD2 431 aaPredicted RBP10.79□□□□□ -0.68
UBE4B-207ENST00000470736 PITPNM1O00562 1244 aa10.77□□□□□ -0.69
UBE4B-207ENST00000470736 FXR2P51116 673 aaKnown RBP eCLIP10.76□□□□□ -0.691e-6■■■□□ 15.3
UBE4B-207ENST00000470736 NACADO15069 1562 aa10.73□□□□□ -0.69
UBE4B-207ENST00000470736 ZCCHC6Q5VYS8 1495 aaKnown RBP10.66□□□□□ -0.7
UBE4B-207ENST00000470736 HAX1O00165 279 aa10.64□□□□□ -0.71
UBE4B-207ENST00000470736 SPDYE1Q8NFV5 336 aaPredicted RBP10.64□□□□□ -0.71
UBE4B-207ENST00000470736 SSUH2Q9Y2M2 353 aa10.6□□□□□ -0.71
UBE4B-207ENST00000470736 MYO15BQ96JP2 1530 aa10.58□□□□□ -0.72
UBE4B-207ENST00000470736 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
UBE4B-207ENST00000470736 MKRN4PQ13434 485 aaPredicted RBP10.56□□□□□ -0.72
UBE4B-207ENST00000470736 DCAF1Q9Y4B6 1507 aa10.54□□□□□ -0.72
UBE4B-207ENST00000470736 PABPN1Q86U42 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
UBE4B-207ENST00000470736 UNC13AQ9UPW8 1703 aa10.54□□□□□ -0.72
UBE4B-207ENST00000470736 PRKAR2AP13861 404 aaKnown RBP10.5□□□□□ -0.73
UBE4B-207ENST00000470736 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
UBE4B-207ENST00000470736 SCRIBQ14160 1630 aa10.5□□□□□ -0.73
UBE4B-207ENST00000470736 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
UBE4B-207ENST00000470736 BICRAQ9NZM4 1560 aa10.4□□□□□ -0.74
UBE4B-207ENST00000470736 EVX2Q03828 476 aa10.39□□□□□ -0.75
UBE4B-207ENST00000470736 PRR29P0C7W0 189 aa10.38□□□□□ -0.75
UBE4B-207ENST00000470736 CLCN6P51797 869 aa10.31□□□□□ -0.76
UBE4B-207ENST00000470736 CSRNP3Q8WYN3 585 aa10.29□□□□□ -0.76
UBE4B-207ENST00000470736 SHROOM4Q9ULL8 1493 aa10.27□□□□□ -0.77
UBE4B-207ENST00000470736 GABBR2O75899 941 aa10.25□□□□□ -0.77
UBE4B-207ENST00000470736 CHADLQ6NUI6 762 aa10.25□□□□□ -0.77
UBE4B-207ENST00000470736 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
UBE4B-207ENST00000470736 FARP1Q9Y4F1 1045 aaPredicted RBP10.21□□□□□ -0.77
UBE4B-207ENST00000470736 EIF4G1Q04637 1599 aaKnown RBP10.18□□□□□ -0.78
UBE4B-207ENST00000470736 CD44P16070 742 aaKnown RBP10.17□□□□□ -0.78
UBE4B-207ENST00000470736 CC2D2AQ9P2K1 1620 aa10.16□□□□□ -0.78
UBE4B-207ENST00000470736 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
UBE4B-207ENST00000470736 LHX8Q68G74 356 aa10.1□□□□□ -0.79
UBE4B-207ENST00000470736 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
UBE4B-207ENST00000470736 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
UBE4B-207ENST00000470736 CREBZFQ9NS37 354 aa10.04□□□□□ -0.8
UBE4B-207ENST00000470736 EHMT2Q96KQ7 1210 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms