RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 POGZQ7Z3K3 1410 aa23.2■■□□□ 1.3
SNAPC3-205ENST00000467062 MYOM2P54296 1465 aa23.19■■□□□ 1.3
SNAPC3-205ENST00000467062 MYOM1P52179 1685 aa23.19■■□□□ 1.3
SNAPC3-205ENST00000467062 INSRP06213 1382 aa23.19■■□□□ 1.3
SNAPC3-205ENST00000467062 SLFN5Q08AF3 891 aa23.18■■□□□ 1.3
SNAPC3-205ENST00000467062 PIK3C2GO75747 1445 aa23.17■■□□□ 1.3
SNAPC3-205ENST00000467062 MORC1Q86VD1 984 aa23.17■■□□□ 1.3
SNAPC3-205ENST00000467062 STK26Q9P289 416 aa23.17■■□□□ 1.3
SNAPC3-205ENST00000467062 RRP7AQ9Y3A4 280 aaKnown RBP23.17■■□□□ 1.3
SNAPC3-205ENST00000467062 BCAR3O75815 825 aa23.16■■□□□ 1.3
SNAPC3-205ENST00000467062 FRMPD1Q5SYB0 1578 aa23.16■■□□□ 1.3
SNAPC3-205ENST00000467062 KIF1BO60333 1816 aa23.15■■□□□ 1.3
SNAPC3-205ENST00000467062 FAM161AQ3B820 660 aa23.15■■□□□ 1.3
SNAPC3-205ENST00000467062 NPC1L1Q9UHC9 1359 aa23.14■■□□□ 1.29
SNAPC3-205ENST00000467062 KDM5AP29375 1690 aaKnown RBP23.14■■□□□ 1.29
SNAPC3-205ENST00000467062 NSD3Q9BZ95 1437 aa23.13■■□□□ 1.29
SNAPC3-205ENST00000467062 IDI1Q13907 227 aa23.13■■□□□ 1.29
SNAPC3-205ENST00000467062 POGKQ9P215 609 aa23.13■■□□□ 1.29
SNAPC3-205ENST00000467062 CABP2Q9NPB3 220 aa23.13■■□□□ 1.29
SNAPC3-205ENST00000467062 CYB5RLQ6IPT4 315 aa23.11■■□□□ 1.29
SNAPC3-205ENST00000467062 MLH3Q9UHC1 1453 aa23.11■■□□□ 1.29
SNAPC3-205ENST00000467062 NRXN1Q9ULB1 1477 aa23.11■■□□□ 1.29
SNAPC3-205ENST00000467062 ADGRB3O60242 1522 aa23.1■■□□□ 1.29
SNAPC3-205ENST00000467062 LMTK2Q8IWU2 1503 aa23.1■■□□□ 1.29
SNAPC3-205ENST00000467062 KIAA1210Q9ULL0 1709 aa23.09■■□□□ 1.29
SNAPC3-205ENST00000467062 MTHFSP49914 203 aa23.08■■□□□ 1.29
SNAPC3-205ENST00000467062 TRMT2AQ8IZ69 625 aaKnown RBP23.07■■□□□ 1.28
SNAPC3-205ENST00000467062 C8orf34Q49A92 452 aa23.06■■□□□ 1.28
SNAPC3-205ENST00000467062 FBXO31Q5XUX0 539 aaPredicted RBP23.06■■□□□ 1.28
SNAPC3-205ENST00000467062 VGFO15240 615 aaPredicted RBP23.05■■□□□ 1.28
SNAPC3-205ENST00000467062 NEURL4Q96JN8 1562 aa23.05■■□□□ 1.28
SNAPC3-205ENST00000467062 ABCC3O15438 1527 aa23.05■■□□□ 1.28
SNAPC3-205ENST00000467062 WWC1Q8IX03 1113 aa23.05■■□□□ 1.28
SNAPC3-205ENST00000467062 YEATS2Q9ULM3 1422 aa23.05■■□□□ 1.28
SNAPC3-205ENST00000467062 SBNO2Q9Y2G9 1366 aa23.04■■□□□ 1.28
SNAPC3-205ENST00000467062 CENPQQ7L2Z9 268 aaPredicted RBP23.03■■□□□ 1.28
SNAPC3-205ENST00000467062 HECW2Q9P2P5 1572 aa23.03■■□□□ 1.28
SNAPC3-205ENST00000467062 IFT172Q9UG01 1749 aa23.03■■□□□ 1.28
SNAPC3-205ENST00000467062 E9PSI1 815 aa23.02■■□□□ 1.28
SNAPC3-205ENST00000467062 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
SNAPC3-205ENST00000467062 RPGRIP1LQ68CZ1 1315 aa23.02■■□□□ 1.28
SNAPC3-205ENST00000467062 TCP11L2Q8N4U5 519 aa23.01■■□□□ 1.27
SNAPC3-205ENST00000467062 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.01■■□□□ 1.27
SNAPC3-205ENST00000467062 KDM2BQ8NHM5 1336 aa23.01■■□□□ 1.27
SNAPC3-205ENST00000467062 GOLGA6L3A6NEY3 463 aa23.01■■□□□ 1.27
SNAPC3-205ENST00000467062 SRPK2P78362 688 aaKnown RBP23■■□□□ 1.27
SNAPC3-205ENST00000467062 PDCL3Q9H2J4 239 aa23■■□□□ 1.27
SNAPC3-205ENST00000467062 XRCC6P12956 609 aaKnown RBP eCLIP22.99■■□□□ 1.27
SNAPC3-205ENST00000467062 RGS3P49796 1198 aa22.99■■□□□ 1.27
SNAPC3-205ENST00000467062 EVC2Q86UK5 1308 aa22.99■■□□□ 1.27
SNAPC3-205ENST00000467062 POLR3AO14802 1390 aaPredicted RBP22.99■■□□□ 1.27
SNAPC3-205ENST00000467062 CGNL1Q0VF96 1302 aa22.98■■□□□ 1.27
SNAPC3-205ENST00000467062 MINK1Q8N4C8 1332 aaPredicted RBP22.98■■□□□ 1.27
SNAPC3-205ENST00000467062 NKTRP30414 1462 aaKnown RBP22.98■■□□□ 1.27
SNAPC3-205ENST00000467062 BCL2L13Q9BXK5 485 aa22.98■■□□□ 1.27
SNAPC3-205ENST00000467062 PANK1Q8TE04 598 aa22.97■■□□□ 1.27
SNAPC3-205ENST00000467062 GGNBP2Q9H3C7 697 aa22.97■■□□□ 1.27
SNAPC3-205ENST00000467062 TPM2P07951 284 aa22.97■■□□□ 1.27
SNAPC3-205ENST00000467062 SIGLEC1Q9BZZ2 1709 aa22.97■■□□□ 1.27
SNAPC3-205ENST00000467062 CALD1Q05682 793 aaKnown RBP22.96■■□□□ 1.27
SNAPC3-205ENST00000467062 BECN1Q14457 450 aa22.96■■□□□ 1.27
SNAPC3-205ENST00000467062 U2AF1L5P0DN76 240 aaPredicted RBP22.96■■□□□ 1.27
SNAPC3-205ENST00000467062 U2AF1Q01081 240 aaKnown RBP eCLIP22.96■■□□□ 1.27
SNAPC3-205ENST00000467062 FSD2A1L4K1 749 aa22.95■■□□□ 1.26
SNAPC3-205ENST00000467062 CANXP27824 592 aaKnown RBP22.95■■□□□ 1.26
SNAPC3-205ENST00000467062 RUNDC1Q96C34 613 aa22.95■■□□□ 1.26
SNAPC3-205ENST00000467062 COG6Q9Y2V7 657 aa22.95■■□□□ 1.26
SNAPC3-205ENST00000467062 PPLO60437 1756 aa22.95■■□□□ 1.26
SNAPC3-205ENST00000467062 SETBP1Q9Y6X0 1596 aa22.95■■□□□ 1.26
SNAPC3-205ENST00000467062 PRAM1Q96QH2 718 aa22.95■■□□□ 1.26
SNAPC3-205ENST00000467062 TNNQ9UQP3 1299 aa22.94■■□□□ 1.26
SNAPC3-205ENST00000467062 QRICH2Q9H0J4 1663 aa22.93■■□□□ 1.26
SNAPC3-205ENST00000467062 FAM69CQ0P6D2 419 aa22.93■■□□□ 1.26
SNAPC3-205ENST00000467062 MLECQ14165 292 aa22.93■■□□□ 1.26
SNAPC3-205ENST00000467062 IGHDP01880 384 aa22.92■■□□□ 1.26
SNAPC3-205ENST00000467062 STAG3Q9UJ98 1225 aa22.92■■□□□ 1.26
SNAPC3-205ENST00000467062 MYO3AQ8NEV4 1616 aa22.92■■□□□ 1.26
SNAPC3-205ENST00000467062 NEO1Q92859 1461 aa22.92■■□□□ 1.26
SNAPC3-205ENST00000467062 SLC52A1Q9NWF4 448 aa22.91■■□□□ 1.26
SNAPC3-205ENST00000467062 DIP2CQ9Y2E4 1556 aa22.91■■□□□ 1.26
SNAPC3-205ENST00000467062 RBM10P98175 930 aaKnown RBP22.91■■□□□ 1.26
SNAPC3-205ENST00000467062 CAMSAP1Q5T5Y3 1602 aa22.9■■□□□ 1.26
SNAPC3-205ENST00000467062 U2SURPO15042 1029 aaKnown RBP22.9■■□□□ 1.26
SNAPC3-205ENST00000467062 CFAP74Q9C0B2 1584 aa22.9■■□□□ 1.26
SNAPC3-205ENST00000467062 FBLN1P23142 703 aa22.9■■□□□ 1.26
SNAPC3-205ENST00000467062 CFAP53Q96M91 514 aa22.9■■□□□ 1.26
SNAPC3-205ENST00000467062 GLI2P10070 1586 aa22.89■■□□□ 1.26
SNAPC3-205ENST00000467062 TULP4Q9NRJ4 1543 aa22.89■■□□□ 1.25
SNAPC3-205ENST00000467062 CLUAP1Q96AJ1 413 aa22.89■■□□□ 1.25
SNAPC3-205ENST00000467062 NEXMIFQ5QGS0 1516 aa22.88■■□□□ 1.25
SNAPC3-205ENST00000467062 A0A1W2PP64 1363 aa22.87■■□□□ 1.25
SNAPC3-205ENST00000467062 ANKRD36BQ8N2N9 1353 aa22.87■■□□□ 1.25
SNAPC3-205ENST00000467062 ESPNB1AK53 854 aa22.87■■□□□ 1.25
SNAPC3-205ENST00000467062 MRE11P49959 708 aa22.86■■□□□ 1.25
SNAPC3-205ENST00000467062 ARXQ96QS3 562 aa22.86■■□□□ 1.25
SNAPC3-205ENST00000467062 RARSP54136 660 aaKnown RBP22.85■■□□□ 1.25
SNAPC3-205ENST00000467062 PANK2Q9BZ23 570 aa22.85■■□□□ 1.25
SNAPC3-205ENST00000467062 RLBP1P12271 317 aa22.85■■□□□ 1.25
SNAPC3-205ENST00000467062 WAPLQ7Z5K2 1190 aa22.84■■□□□ 1.25
SNAPC3-205ENST00000467062 TSR2Q969E8 191 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms