RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 SETD1BQ9UPS6 1966 aaKnown RBP5.58□□□□□ -1.52
SORT1-202ENST00000466471 WDR7Q9Y4E6 1490 aa5.58□□□□□ -1.52
SORT1-202ENST00000466471 SIGLEC1Q9BZZ2 1709 aa5.58□□□□□ -1.52
SORT1-202ENST00000466471 SOWAHBA6NEL2 793 aa5.58□□□□□ -1.52
SORT1-202ENST00000466471 SEMA3EO15041 775 aa5.58□□□□□ -1.52
SORT1-202ENST00000466471 HRCP23327 699 aa5.58□□□□□ -1.52
SORT1-202ENST00000466471 LAPTM4BQ86VI4 370 aa5.58□□□□□ -1.52
SORT1-202ENST00000466471 EPAS1Q99814 870 aa5.58□□□□□ -1.52
SORT1-202ENST00000466471 ZMYND15Q9H091 742 aa5.58□□□□□ -1.52
SORT1-202ENST00000466471 WBP1LQ9NX94 342 aa5.58□□□□□ -1.52
SORT1-202ENST00000466471 UBAP1LF5GYI3 381 aa5.57□□□□□ -1.52
SORT1-202ENST00000466471 SUPT5HO00267 1087 aaKnown RBP5.57□□□□□ -1.52
SORT1-202ENST00000466471 HSPA1LP34931 641 aa5.57□□□□□ -1.52
SORT1-202ENST00000466471 PTPRGP23470 1445 aa5.57□□□□□ -1.52
SORT1-202ENST00000466471 CD109Q6YHK3 1445 aa5.57□□□□□ -1.52
SORT1-202ENST00000466471 TRIM6-TRIM34B2RNG4 842 aa5.56□□□□□ -1.52
SORT1-202ENST00000466471 PODXL2Q9NZ53 605 aa5.56□□□□□ -1.52
SORT1-202ENST00000466471 RGS17Q9UGC6 210 aaPredicted RBP5.56□□□□□ -1.52
SORT1-202ENST00000466471 ONECUT3O60422 494 aaPredicted RBP5.55□□□□□ -1.52
SORT1-202ENST00000466471 ITGBL1O95965 494 aaPredicted RBP5.55□□□□□ -1.52
SORT1-202ENST00000466471 KIAA0556O60303 1618 aa5.55□□□□□ -1.52
SORT1-202ENST00000466471 FANCAO15360 1455 aa5.54□□□□□ -1.52
SORT1-202ENST00000466471 MAP3K7O43318 606 aa5.54□□□□□ -1.52
SORT1-202ENST00000466471 FAM98CQ17RN3 349 aaKnown RBP5.54□□□□□ -1.52
SORT1-202ENST00000466471 TSR1Q2NL82 804 aaKnown RBP5.54□□□□□ -1.52
SORT1-202ENST00000466471 HPS5Q9UPZ3 1129 aa5.54□□□□□ -1.52
SORT1-202ENST00000466471 ALKQ9UM73 1620 aa5.54□□□□□ -1.52
SORT1-202ENST00000466471 NCOA1Q15788 1441 aa5.54□□□□□ -1.52
SORT1-202ENST00000466471 UHRF1BP1Q6BDS2 1440 aa5.54□□□□□ -1.52
SORT1-202ENST00000466471 UACAQ9BZF9 1416 aa5.54□□□□□ -1.52
SORT1-202ENST00000466471 KCNC4Q03721 635 aa5.53□□□□□ -1.52
SORT1-202ENST00000466471 LRCH3Q96II8 777 aa5.53□□□□□ -1.52
SORT1-202ENST00000466471 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.53□□□□□ -1.52
SORT1-202ENST00000466471 TSKSQ9UJT2 592 aa5.53□□□□□ -1.52
SORT1-202ENST00000466471 TNIKQ9UKE5 1360 aa5.53□□□□□ -1.52
SORT1-202ENST00000466471 ARHGEF12Q9NZN5 1544 aa5.53□□□□□ -1.52
SORT1-202ENST00000466471 RICTORQ6R327 1708 aa5.52□□□□□ -1.53
SORT1-202ENST00000466471 POGZQ7Z3K3 1410 aa5.52□□□□□ -1.53
SORT1-202ENST00000466471 NYAP1Q6ZVC0 841 aa5.52□□□□□ -1.53
SORT1-202ENST00000466471 PACS2Q86VP3 889 aa5.52□□□□□ -1.53
SORT1-202ENST00000466471 TSR3Q9UJK0 312 aaKnown RBP5.52□□□□□ -1.53
SORT1-202ENST00000466471 PHLDB1Q86UU1 1377 aa5.52□□□□□ -1.53
SORT1-202ENST00000466471 SMAPO00193 183 aa5.51□□□□□ -1.53
SORT1-202ENST00000466471 EN1Q05925 392 aaPredicted RBP5.51□□□□□ -1.53
SORT1-202ENST00000466471 GPIHBP1Q8IV16 184 aa5.51□□□□□ -1.53
SORT1-202ENST00000466471 ZMYM4Q5VZL5 1548 aa5.5□□□□□ -1.53
SORT1-202ENST00000466471 FLIIQ13045 1269 aa5.5□□□□□ -1.53
SORT1-202ENST00000466471 PDIA6Q15084 440 aa5.5□□□□□ -1.53
SORT1-202ENST00000466471 KDM4CQ9H3R0 1056 aa5.5□□□□□ -1.53
SORT1-202ENST00000466471 ARID4BQ4LE39 1312 aaPredicted RBP5.49□□□□□ -1.53
SORT1-202ENST00000466471 ABCA9Q8IUA7 1624 aa5.49□□□□□ -1.53
SORT1-202ENST00000466471 GRXCR2A6NFK2 248 aa5.49□□□□□ -1.53
SORT1-202ENST00000466471 UBTFP17480 764 aaKnown RBP5.49□□□□□ -1.53
SORT1-202ENST00000466471 PRIM1P49642 420 aaKnown RBP5.49□□□□□ -1.53
SORT1-202ENST00000466471 PPP4CP60510 307 aa5.49□□□□□ -1.53
SORT1-202ENST00000466471 FAM198AQ9UFP1 575 aa5.49□□□□□ -1.53
SORT1-202ENST00000466471 NEO1Q92859 1461 aa5.49□□□□□ -1.53
SORT1-202ENST00000466471 SPDYE16A6NNV3 312 aaPredicted RBP5.48□□□□□ -1.53
SORT1-202ENST00000466471 C3orf80F5H4A9 247 aa5.48□□□□□ -1.53
SORT1-202ENST00000466471 PRSS12P56730 875 aa5.48□□□□□ -1.53
SORT1-202ENST00000466471 Q6ZNB5 142 aa5.48□□□□□ -1.53
SORT1-202ENST00000466471 SAMD7Q7Z3H4 446 aa5.48□□□□□ -1.53
SORT1-202ENST00000466471 KRI1Q8N9T8 703 aaKnown RBP5.48□□□□□ -1.53
SORT1-202ENST00000466471 CDCA7LQ96GN5 454 aa5.48□□□□□ -1.53
SORT1-202ENST00000466471 DDRGK1Q96HY6 314 aa5.48□□□□□ -1.53
SORT1-202ENST00000466471 GOPCQ9HD26 462 aa5.48□□□□□ -1.53
SORT1-202ENST00000466471 BIVM-ERCC5R4GMW8 1640 aa5.48□□□□□ -1.53
SORT1-202ENST00000466471 WRNQ14191 1432 aaPredicted RBP eCLIP5.48□□□□□ -1.53
SORT1-202ENST00000466471 CARMIL2Q6F5E8 1435 aa5.48□□□□□ -1.53
SORT1-202ENST00000466471 ZNF335Q9H4Z2 1342 aaPredicted RBP5.48□□□□□ -1.53
SORT1-202ENST00000466471 TRIM66O15016 1216 aa5.47□□□□□ -1.53
SORT1-202ENST00000466471 PDE4DQ08499 809 aa5.47□□□□□ -1.53
SORT1-202ENST00000466471 POTEAQ6S8J7 498 aa5.47□□□□□ -1.53
SORT1-202ENST00000466471 EFCAB5A4FU69 1503 aa5.47□□□□□ -1.53
SORT1-202ENST00000466471 C3P01024 1663 aa5.47□□□□□ -1.53
SORT1-202ENST00000466471 CAMSAP1Q5T5Y3 1602 aa5.46□□□□□ -1.54
SORT1-202ENST00000466471 TJAP1Q5JTD0 557 aa5.46□□□□□ -1.54
SORT1-202ENST00000466471 TATDN2Q93075 761 aa5.46□□□□□ -1.54
SORT1-202ENST00000466471 PNMA3Q9UL41 463 aa5.46□□□□□ -1.54
SORT1-202ENST00000466471 CPS1P31327 1500 aa5.46□□□□□ -1.54
SORT1-202ENST00000466471 AKNAQ7Z591 1439 aa5.46□□□□□ -1.54
SORT1-202ENST00000466471 ZNF142P52746 1687 aaPredicted RBP5.46□□□□□ -1.54
SORT1-202ENST00000466471 ZFYVE16Q7Z3T8 1539 aa5.45□□□□□ -1.54
SORT1-202ENST00000466471 DISP1Q96F81 1524 aa5.45□□□□□ -1.54
SORT1-202ENST00000466471 CDHR5Q9HBB8 845 aa5.45□□□□□ -1.54
SORT1-202ENST00000466471 GPBP1L1Q9HC44 474 aaPredicted RBP5.45□□□□□ -1.54
SORT1-202ENST00000466471 NBPF26B4DH59 902 aa5.44□□□□□ -1.54
SORT1-202ENST00000466471 RNF40O75150 1001 aa5.44□□□□□ -1.54
SORT1-202ENST00000466471 RAPGEF3O95398 923 aa5.44□□□□□ -1.54
SORT1-202ENST00000466471 IQGAP2Q13576 1575 aa5.44□□□□□ -1.54
SORT1-202ENST00000466471 FHOD3Q2V2M9 1422 aa5.44□□□□□ -1.54
SORT1-202ENST00000466471 IL27Q8NEV9 243 aa5.44□□□□□ -1.54
SORT1-202ENST00000466471 MTRQ99707 1265 aa5.44□□□□□ -1.54
SORT1-202ENST00000466471 LRP5O75197 1615 aa5.44□□□□□ -1.54
SORT1-202ENST00000466471 PLA2R1Q13018 1463 aa5.44□□□□□ -1.54
SORT1-202ENST00000466471 TCOF1Q13428 1488 aaKnown RBP5.44□□□□□ -1.54
SORT1-202ENST00000466471 MINK1Q8N4C8 1332 aaPredicted RBP5.44□□□□□ -1.54
SORT1-202ENST00000466471 PTPRKQ15262 1439 aa5.43□□□□□ -1.54
SORT1-202ENST00000466471 GFRA3O60609 400 aa5.43□□□□□ -1.54
SORT1-202ENST00000466471 TOM1O60784 492 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms