RNA–Protein interactions for RNA: ENST00000461623.1

ABCA9-204, Transcript of ATP binding cassette subfamily A member 9, human

TSL 5

Gene ABCA9, Length 2,172 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA9-204	ENST00000461623	MOXD2P	A6NHM9	499 aa		10.52	□□□□□ -0.72
ABCA9-204	ENST00000461623	GIPC2	Q8TF65	315 aa		10.52	□□□□□ -0.72
ABCA9-204	ENST00000461623	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.52	□□□□□ -0.72
ABCA9-204	ENST00000461623	HMX1	Q9NP08	348 aa	Predicted RBP	10.52	□□□□□ -0.72
ABCA9-204	ENST00000461623	LAMC3	Q9Y6N6	1575 aa		10.52	□□□□□ -0.73
ABCA9-204	ENST00000461623	PRR7	Q8TB68	274 aa		10.52	□□□□□ -0.73
ABCA9-204	ENST00000461623	RRBP1	Q9P2E9	1410 aa	Known RBP	10.52	□□□□□ -0.73
ABCA9-204	ENST00000461623	WDR97	A6NE52	1622 aa		10.51	□□□□□ -0.73
ABCA9-204	ENST00000461623	TRIM34	Q9BYJ4	488 aa		10.5	□□□□□ -0.73
ABCA9-204	ENST00000461623	CUL7	Q14999	1698 aa		10.5	□□□□□ -0.73
ABCA9-204	ENST00000461623	TMEM164	Q5U3C3	297 aa		10.5	□□□□□ -0.73
ABCA9-204	ENST00000461623	PADI6	Q6TGC4	694 aa		10.5	□□□□□ -0.73
ABCA9-204	ENST00000461623	TOPBP1	Q92547	1522 aa		10.5	□□□□□ -0.73
ABCA9-204	ENST00000461623	ZMIZ1	Q9ULJ6	1067 aa		10.49	□□□□□ -0.73
ABCA9-204	ENST00000461623	NDUFV2	P19404	249 aa		10.49	□□□□□ -0.73
ABCA9-204	ENST00000461623	STK32A	Q8WU08	396 aa		10.49	□□□□□ -0.73
ABCA9-204	ENST00000461623	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.49	□□□□□ -0.73
ABCA9-204	ENST00000461623	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.49	□□□□□ -0.73
ABCA9-204	ENST00000461623	ZRANB1	Q9UGI0	708 aa		10.49	□□□□□ -0.73
ABCA9-204	ENST00000461623	CARMIL1	Q5VZK9	1371 aa		10.49	□□□□□ -0.73
ABCA9-204	ENST00000461623	PHF14	O94880	888 aa		10.48	□□□□□ -0.73
ABCA9-204	ENST00000461623	PDCD7	Q8N8D1	485 aa	Known RBP	10.48	□□□□□ -0.73
ABCA9-204	ENST00000461623	CABLES1	Q8TDN4	633 aa		10.48	□□□□□ -0.73
ABCA9-204	ENST00000461623	EPAS1	Q99814	870 aa		10.48	□□□□□ -0.73
ABCA9-204	ENST00000461623	POLR3GL	Q9BT43	218 aa		10.48	□□□□□ -0.73
ABCA9-204	ENST00000461623	POLA1	P09884	1462 aa	Predicted RBP	10.48	□□□□□ -0.73
ABCA9-204	ENST00000461623	TTLL13P	A6NNM8	815 aa		10.48	□□□□□ -0.73
ABCA9-204	ENST00000461623	CACNB1	Q02641	598 aa	Predicted RBP	10.48	□□□□□ -0.73
ABCA9-204	ENST00000461623	TBC1D9	Q6ZT07	1266 aa		10.48	□□□□□ -0.73
ABCA9-204	ENST00000461623	MS4A3	Q96HJ5	214 aa		10.47	□□□□□ -0.73
ABCA9-204	ENST00000461623	CLSPN	Q9HAW4	1339 aa		10.47	□□□□□ -0.73
ABCA9-204	ENST00000461623	TIAM1	Q13009	1591 aa		10.47	□□□□□ -0.73
ABCA9-204	ENST00000461623	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.46	□□□□□ -0.73
ABCA9-204	ENST00000461623	NUTM2E	B1AL46	878 aa	Predicted RBP	10.46	□□□□□ -0.73
ABCA9-204	ENST00000461623	CD46	P15529	392 aa		10.46	□□□□□ -0.73
ABCA9-204	ENST00000461623	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.46	□□□□□ -0.73
ABCA9-204	ENST00000461623	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.46	□□□□□ -0.73
ABCA9-204	ENST00000461623	DHX37	Q8IY37	1157 aa	Known RBP	10.46	□□□□□ -0.73
ABCA9-204	ENST00000461623	CFAP43	Q8NDM7	1665 aa		10.46	□□□□□ -0.73
ABCA9-204	ENST00000461623	CWC22	Q9HCG8	908 aa	Known RBP	10.46	□□□□□ -0.73
ABCA9-204	ENST00000461623	GJA5	P36382	358 aa		10.46	□□□□□ -0.74
ABCA9-204	ENST00000461623	EFCAB5	A4FU69	1503 aa		10.45	□□□□□ -0.74
ABCA9-204	ENST00000461623	ELOA	Q14241	798 aa	Known RBP	10.45	□□□□□ -0.74
ABCA9-204	ENST00000461623	PCDHGA10	Q9Y5H3	936 aa		10.45	□□□□□ -0.74
ABCA9-204	ENST00000461623	SOWAHD	A6NJG2	315 aa		10.45	□□□□□ -0.74
ABCA9-204	ENST00000461623	KANK4	Q5T7N3	995 aa	Predicted RBP	10.45	□□□□□ -0.74
ABCA9-204	ENST00000461623	BOLA1	Q9Y3E2	137 aa		10.45	□□□□□ -0.74
ABCA9-204	ENST00000461623	CTTNBP2	Q8WZ74	1663 aa		10.45	□□□□□ -0.74
ABCA9-204	ENST00000461623	ZC3H6	P61129	1189 aa	Known RBP	10.44	□□□□□ -0.74
ABCA9-204	ENST00000461623	TMEM92	Q6UXU6	159 aa		10.44	□□□□□ -0.74
ABCA9-204	ENST00000461623	NUTM1	Q86Y26	1132 aa		10.44	□□□□□ -0.74
ABCA9-204	ENST00000461623	ABCA5	Q8WWZ7	1642 aa		10.44	□□□□□ -0.74
ABCA9-204	ENST00000461623	NPAS4	Q8IUM7	802 aa		10.43	□□□□□ -0.74
ABCA9-204	ENST00000461623	ARID4A	P29374	1257 aa	Predicted RBP	10.43	□□□□□ -0.74
ABCA9-204	ENST00000461623	MARS	P56192	900 aa	Known RBP	10.43	□□□□□ -0.74
ABCA9-204	ENST00000461623	SLAIN1	Q8ND83	568 aa		10.43	□□□□□ -0.74
ABCA9-204	ENST00000461623	NES	P48681	1621 aa		10.43	□□□□□ -0.74
ABCA9-204	ENST00000461623	SSFA2	P28290	1259 aa		10.42	□□□□□ -0.74
ABCA9-204	ENST00000461623	SLAIN2	Q9P270	581 aa		10.42	□□□□□ -0.74
ABCA9-204	ENST00000461623	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.42	□□□□□ -0.74
ABCA9-204	ENST00000461623	FHAD1	B1AJZ9	1412 aa		10.42	□□□□□ -0.74
ABCA9-204	ENST00000461623	URB2	Q14146	1524 aa	Known RBP	10.42	□□□□□ -0.74
ABCA9-204	ENST00000461623	CTDSPL2	Q05D32	466 aa		10.42	□□□□□ -0.74
ABCA9-204	ENST00000461623	UBXN4	Q92575	508 aa		10.42	□□□□□ -0.74
ABCA9-204	ENST00000461623	AQR	O60306	1485 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
ABCA9-204	ENST00000461623	ATP9B	O43861	1147 aa		10.41	□□□□□ -0.74
ABCA9-204	ENST00000461623	VAMP1	P23763	118 aa		10.41	□□□□□ -0.74
ABCA9-204	ENST00000461623	TIE1	P35590	1138 aa		10.41	□□□□□ -0.74
ABCA9-204	ENST00000461623	SOX11	P35716	441 aa		10.41	□□□□□ -0.74
ABCA9-204	ENST00000461623	TTC13	Q8NBP0	860 aa		10.41	□□□□□ -0.74
ABCA9-204	ENST00000461623	RAD54L2	Q9Y4B4	1467 aa		10.41	□□□□□ -0.74
ABCA9-204	ENST00000461623	SERPINB4	P48594	390 aa		10.41	□□□□□ -0.74
ABCA9-204	ENST00000461623	PRPF38B	Q5VTL8	546 aa	Known RBP	10.41	□□□□□ -0.74
ABCA9-204	ENST00000461623	PCF11	O94913	1555 aa	Known RBP	10.4	□□□□□ -0.74
ABCA9-204	ENST00000461623	ANKRD33B	A6NCL7	494 aa		10.4	□□□□□ -0.74
ABCA9-204	ENST00000461623	TRIM35	Q9UPQ4	493 aa		10.4	□□□□□ -0.74
ABCA9-204	ENST00000461623	CCNB3	Q8WWL7	1395 aa		10.4	□□□□□ -0.74
ABCA9-204	ENST00000461623	NAALADL2	Q58DX5	795 aa		10.39	□□□□□ -0.75
ABCA9-204	ENST00000461623	PTCD2	Q8WV60	388 aa	Known RBP	10.39	□□□□□ -0.75
ABCA9-204	ENST00000461623	LRRC9	Q6ZRR7	1453 aa		10.39	□□□□□ -0.75
ABCA9-204	ENST00000461623	FYCO1	Q9BQS8	1478 aa		10.39	□□□□□ -0.75
ABCA9-204	ENST00000461623	DHX57	Q6P158	1386 aa	Known RBP	10.39	□□□□□ -0.75
ABCA9-204	ENST00000461623	DIEXF	Q68CQ4	756 aa	Known RBP	10.39	□□□□□ -0.75
ABCA9-204	ENST00000461623	NOVA2	Q9UNW9	492 aa	Known RBP	10.39	□□□□□ -0.75
ABCA9-204	ENST00000461623	RECK	O95980	971 aa		10.38	□□□□□ -0.75
ABCA9-204	ENST00000461623	SEMA3F	Q13275	785 aa		10.38	□□□□□ -0.75
ABCA9-204	ENST00000461623	EPS8L1	Q8TE68	723 aa		10.38	□□□□□ -0.75
ABCA9-204	ENST00000461623	PDS5B	Q9NTI5	1447 aa		10.37	□□□□□ -0.75
ABCA9-204	ENST00000461623	LRRN4	Q8WUT4	740 aa		10.37	□□□□□ -0.75
ABCA9-204	ENST00000461623	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.37	□□□□□ -0.75
ABCA9-204	ENST00000461623	SAMD9	Q5K651	1589 aa		10.37	□□□□□ -0.75
ABCA9-204	ENST00000461623	TAGLN	Q01995	201 aa	Known RBP	10.36	□□□□□ -0.75
ABCA9-204	ENST00000461623	ZNF326	Q5BKZ1	582 aa	Known RBP	10.36	□□□□□ -0.75
ABCA9-204	ENST00000461623	TYW1B	Q6NUM6	668 aa		10.36	□□□□□ -0.75
ABCA9-204	ENST00000461623	ZBTB3	Q9H5J0	574 aa		10.36	□□□□□ -0.75
ABCA9-204	ENST00000461623	CASKIN1	Q8WXD9	1431 aa		10.36	□□□□□ -0.75
ABCA9-204	ENST00000461623	C7	P10643	843 aa		10.36	□□□□□ -0.75
ABCA9-204	ENST00000461623	FXR2	P51116	673 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
ABCA9-204	ENST00000461623	ANKRD13A	Q8IZ07	590 aa		10.36	□□□□□ -0.75
ABCA9-204	ENST00000461623	RBM46	Q8TBY0	533 aa	Known RBP	10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms