RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 PHLDB1Q86UU1 1377 aa11.51□□□□□ -0.57
COMMD3-204ENST00000456711 RAPGEF3O95398 923 aa11.5□□□□□ -0.57
COMMD3-204ENST00000456711 LCE2AQ5TA79 106 aaPredicted RBP11.5□□□□□ -0.57
COMMD3-204ENST00000456711 PTPRTO14522 1441 aa11.5□□□□□ -0.57
COMMD3-204ENST00000456711 CADPS2Q86UW7 1296 aa11.49□□□□□ -0.57
COMMD3-204ENST00000456711 EMID1Q96A84 441 aaPredicted RBP11.49□□□□□ -0.57
COMMD3-204ENST00000456711 DISP1Q96F81 1524 aa11.49□□□□□ -0.57
COMMD3-204ENST00000456711 IQGAP2Q13576 1575 aa11.47□□□□□ -0.57
COMMD3-204ENST00000456711 TTC37Q6PGP7 1564 aa11.47□□□□□ -0.57
COMMD3-204ENST00000456711 EN1Q05925 392 aaPredicted RBP11.47□□□□□ -0.57
COMMD3-204ENST00000456711 FRMPD1Q5SYB0 1578 aa11.46□□□□□ -0.57
COMMD3-204ENST00000456711 POGZQ7Z3K3 1410 aa11.46□□□□□ -0.57
COMMD3-204ENST00000456711 PKDCCQ504Y2 493 aa11.46□□□□□ -0.57
COMMD3-204ENST00000456711 CDCA7LQ96GN5 454 aa11.46□□□□□ -0.57
COMMD3-204ENST00000456711 ARHGEF40Q8TER5 1519 aa11.45□□□□□ -0.58
COMMD3-204ENST00000456711 UBAP1LF5GYI3 381 aa11.45□□□□□ -0.58
COMMD3-204ENST00000456711 MAP3K7O43318 606 aa11.45□□□□□ -0.58
COMMD3-204ENST00000456711 COPS2P61201 443 aa11.45□□□□□ -0.58
COMMD3-204ENST00000456711 CAMK2BQ13554 666 aa11.45□□□□□ -0.58
COMMD3-204ENST00000456711 TREML4Q6UXN2 200 aa11.45□□□□□ -0.58
COMMD3-204ENST00000456711 FER1L4A9Z1Z3 1794 aa11.44□□□□□ -0.58
COMMD3-204ENST00000456711 IGF1RP08069 1367 aa11.44□□□□□ -0.58
COMMD3-204ENST00000456711 RNF40O75150 1001 aa11.44□□□□□ -0.58
COMMD3-204ENST00000456711 NBR1Q14596 966 aa11.44□□□□□ -0.58
COMMD3-204ENST00000456711 FANCAO15360 1455 aa11.44□□□□□ -0.58
COMMD3-204ENST00000456711 TATDN2Q93075 761 aa11.43□□□□□ -0.58
COMMD3-204ENST00000456711 GGCXP38435 758 aa11.42□□□□□ -0.58
COMMD3-204ENST00000456711 PRSS12P56730 875 aa11.42□□□□□ -0.58
COMMD3-204ENST00000456711 NEO1Q92859 1461 aa11.41□□□□□ -0.58
COMMD3-204ENST00000456711 DGAT1O75907 488 aa11.41□□□□□ -0.58
COMMD3-204ENST00000456711 PNMA3Q9UL41 463 aa11.41□□□□□ -0.58
COMMD3-204ENST00000456711 SLC19A1P41440 591 aa11.4□□□□□ -0.58
COMMD3-204ENST00000456711 TMUB1Q9BVT8 246 aa11.4□□□□□ -0.58
COMMD3-204ENST00000456711 UHRF1BP1Q6BDS2 1440 aa11.4□□□□□ -0.58
COMMD3-204ENST00000456711 SIGLEC1Q9BZZ2 1709 aa11.4□□□□□ -0.58
COMMD3-204ENST00000456711 HSPA1LP34931 641 aa11.39□□□□□ -0.59
COMMD3-204ENST00000456711 KIAA0556O60303 1618 aa11.38□□□□□ -0.59
COMMD3-204ENST00000456711 ABCA9Q8IUA7 1624 aa11.38□□□□□ -0.59
COMMD3-204ENST00000456711 PRIM1P49642 420 aaKnown RBP11.38□□□□□ -0.59
COMMD3-204ENST00000456711 AKNAQ7Z591 1439 aa11.37□□□□□ -0.59
COMMD3-204ENST00000456711 UGGT2Q9NYU1 1516 aa11.37□□□□□ -0.59
COMMD3-204ENST00000456711 RNF223E7ERA6 249 aa11.37□□□□□ -0.59
COMMD3-204ENST00000456711 MLECQ14165 292 aa11.37□□□□□ -0.59
COMMD3-204ENST00000456711 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
COMMD3-204ENST00000456711 ST8SIA5O15466 376 aa11.36□□□□□ -0.59
COMMD3-204ENST00000456711 SPRYD7Q5W111 196 aa11.36□□□□□ -0.59
COMMD3-204ENST00000456711 RICTORQ6R327 1708 aa11.35□□□□□ -0.59
COMMD3-204ENST00000456711 ZPR1O75312 459 aa11.35□□□□□ -0.59
COMMD3-204ENST00000456711 CEBPAP49715 358 aaPredicted RBP11.35□□□□□ -0.59
COMMD3-204ENST00000456711 NUDT18Q6ZVK8 323 aa11.35□□□□□ -0.59
COMMD3-204ENST00000456711 SETD1BQ9UPS6 1966 aaKnown RBP11.35□□□□□ -0.59
COMMD3-204ENST00000456711 ABCA8O94911 1581 aa11.34□□□□□ -0.59
COMMD3-204ENST00000456711 CARMIL1Q5VZK9 1371 aa11.34□□□□□ -0.59
COMMD3-204ENST00000456711 FAM187AA6NFU0 413 aa11.34□□□□□ -0.59
COMMD3-204ENST00000456711 PRR20EP86478 221 aa11.34□□□□□ -0.59
COMMD3-204ENST00000456711 PRR20CP86479 221 aa11.34□□□□□ -0.59
COMMD3-204ENST00000456711 PRR20DP86480 221 aa11.34□□□□□ -0.59
COMMD3-204ENST00000456711 PRR20BP86481 221 aa11.34□□□□□ -0.59
COMMD3-204ENST00000456711 PRR20AP86496 221 aa11.34□□□□□ -0.59
COMMD3-204ENST00000456711 ARHGEF12Q9NZN5 1544 aa11.34□□□□□ -0.59
COMMD3-204ENST00000456711 KIF27Q86VH2 1401 aa11.33□□□□□ -0.6
COMMD3-204ENST00000456711 ZNF598Q86UK7 904 aaKnown RBP11.32□□□□□ -0.6
COMMD3-204ENST00000456711 FHOD3Q2V2M9 1422 aa11.32□□□□□ -0.6
COMMD3-204ENST00000456711 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
COMMD3-204ENST00000456711 EFCAB5A4FU69 1503 aa11.31□□□□□ -0.6
COMMD3-204ENST00000456711 TNFRSF10AO00220 468 aa11.31□□□□□ -0.6
COMMD3-204ENST00000456711 AAASQ9NRG9 546 aa11.31□□□□□ -0.6
COMMD3-204ENST00000456711 NCOA1Q15788 1441 aa11.31□□□□□ -0.6
COMMD3-204ENST00000456711 ZNF335Q9H4Z2 1342 aaPredicted RBP11.31□□□□□ -0.6
COMMD3-204ENST00000456711 ZMYM4Q5VZL5 1548 aa11.3□□□□□ -0.6
COMMD3-204ENST00000456711 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
COMMD3-204ENST00000456711 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
COMMD3-204ENST00000456711 LIAT1Q6ZQX7 453 aa11.3□□□□□ -0.6
COMMD3-204ENST00000456711 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
COMMD3-204ENST00000456711 GDF9O60383 454 aa11.29□□□□□ -0.6
COMMD3-204ENST00000456711 HDGFP51858 240 aaKnown RBP11.28□□□□□ -0.6
COMMD3-204ENST00000456711 PIP4K2BP78356 416 aa11.28□□□□□ -0.6
COMMD3-204ENST00000456711 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
COMMD3-204ENST00000456711 MAGI2Q86UL8 1455 aa11.27□□□□□ -0.6
COMMD3-204ENST00000456711 TLL1O43897 1013 aa11.27□□□□□ -0.61
COMMD3-204ENST00000456711 PDIA6Q15084 440 aa11.27□□□□□ -0.61
COMMD3-204ENST00000456711 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.61
COMMD3-204ENST00000456711 RGS17Q9UGC6 210 aaPredicted RBP11.26□□□□□ -0.61
COMMD3-204ENST00000456711 BLOC1S3Q6QNY0 202 aa11.25□□□□□ -0.61
COMMD3-204ENST00000456711 DACH1Q9UI36 760 aa11.25□□□□□ -0.61
COMMD3-204ENST00000456711 TOM1O60784 492 aa11.24□□□□□ -0.61
COMMD3-204ENST00000456711 ATP10BO94823 1461 aa11.24□□□□□ -0.61
COMMD3-204ENST00000456711 WFS1O76024 890 aa11.23□□□□□ -0.61
COMMD3-204ENST00000456711 C3P01024 1663 aa11.22□□□□□ -0.61
COMMD3-204ENST00000456711 CAMSAP1Q5T5Y3 1602 aa11.22□□□□□ -0.61
COMMD3-204ENST00000456711 SLF2Q8IX21 1173 aa11.22□□□□□ -0.61
COMMD3-204ENST00000456711 ANKLE1Q8NAG6 615 aa11.22□□□□□ -0.61
COMMD3-204ENST00000456711 STK17AQ9UEE5 414 aa11.22□□□□□ -0.61
COMMD3-204ENST00000456711 PCDHB3Q9Y5E6 796 aa11.22□□□□□ -0.61
COMMD3-204ENST00000456711 HECW1Q76N89 1606 aa11.21□□□□□ -0.61
COMMD3-204ENST00000456711 CFAP74Q9C0B2 1584 aa11.21□□□□□ -0.61
COMMD3-204ENST00000456711 ARID3CA6NKF2 412 aa11.21□□□□□ -0.61
COMMD3-204ENST00000456711 S1PR4O95977 384 aa11.21□□□□□ -0.61
COMMD3-204ENST00000456711 ATP10AO60312 1499 aa11.2□□□□□ -0.62
COMMD3-204ENST00000456711 C9orf84Q5VXU9 1444 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms