RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 NFKBIBQ15653 356 aa7.07□□□□□ -1.28
LMO3-209ENST00000447609 NLRP1Q9C000 1473 aa7.07□□□□□ -1.28
LMO3-209ENST00000447609 CLTCQ00610 1675 aaKnown RBP7.07□□□□□ -1.28
LMO3-209ENST00000447609 ESCO1Q5FWF5 840 aa7.06□□□□□ -1.28
LMO3-209ENST00000447609 FRMPD1Q5SYB0 1578 aa7.06□□□□□ -1.28
LMO3-209ENST00000447609 LMTK3Q96Q04 1460 aa7.06□□□□□ -1.28
LMO3-209ENST00000447609 KTN1Q86UP2 1357 aaKnown RBP7.06□□□□□ -1.28
LMO3-209ENST00000447609 NBPF1Q3BBV0 1214 aa7.06□□□□□ -1.28
LMO3-209ENST00000447609 TBX22Q9Y458 520 aa7.06□□□□□ -1.28
LMO3-209ENST00000447609 CENPJQ9HC77 1338 aaPredicted RBP7.06□□□□□ -1.28
LMO3-209ENST00000447609 POLR1AO95602 1720 aaPredicted RBP7.06□□□□□ -1.28
LMO3-209ENST00000447609 A0A0G2JS52 829 aa7.06□□□□□ -1.28
LMO3-209ENST00000447609 PSME1Q06323 249 aa7.06□□□□□ -1.28
LMO3-209ENST00000447609 HDGFL2Q7Z4V5 671 aaPredicted RBP7.06□□□□□ -1.28
LMO3-209ENST00000447609 WAPLQ7Z5K2 1190 aa7.06□□□□□ -1.28
LMO3-209ENST00000447609 RPRD2Q5VT52 1461 aaKnown RBP7.06□□□□□ -1.28
LMO3-209ENST00000447609 RRP1P56182 461 aaKnown RBP7.05□□□□□ -1.28
LMO3-209ENST00000447609 SETD1BQ9UPS6 1966 aaKnown RBP7.05□□□□□ -1.28
LMO3-209ENST00000447609 ZBTB22O15209 634 aa7.05□□□□□ -1.28
LMO3-209ENST00000447609 FER1L4A9Z1Z3 1794 aa7.05□□□□□ -1.28
LMO3-209ENST00000447609 ST20-MTHFSA0A0A6YYL1 179 aa7.05□□□□□ -1.28
LMO3-209ENST00000447609 KCNA6P17658 529 aa7.05□□□□□ -1.28
LMO3-209ENST00000447609 MEX3CQ5U5Q3 659 aaKnown RBP7.05□□□□□ -1.28
LMO3-209ENST00000447609 FRAT1Q92837 279 aaPredicted RBP7.05□□□□□ -1.28
LMO3-209ENST00000447609 EVC2Q86UK5 1308 aa7.05□□□□□ -1.28
LMO3-209ENST00000447609 MSH6P52701 1360 aa7.04□□□□□ -1.28
LMO3-209ENST00000447609 NPHP4O75161 1426 aaPredicted RBP7.04□□□□□ -1.28
LMO3-209ENST00000447609 ARHGAP31Q2M1Z3 1444 aa7.04□□□□□ -1.28
LMO3-209ENST00000447609 A2ML1A8K2U0 1454 aa7.04□□□□□ -1.28
LMO3-209ENST00000447609 RRP9O43818 475 aaKnown RBP7.04□□□□□ -1.28
LMO3-209ENST00000447609 CADPS2Q86UW7 1296 aa7.04□□□□□ -1.28
LMO3-209ENST00000447609 ZNF335Q9H4Z2 1342 aaPredicted RBP7.04□□□□□ -1.28
LMO3-209ENST00000447609 HSP90AA1P07900 732 aaKnown RBP7.04□□□□□ -1.28
LMO3-209ENST00000447609 EFCAB6Q5THR3 1501 aa7.04□□□□□ -1.28
LMO3-209ENST00000447609 CROCC2H7BZ55 1655 aa7.04□□□□□ -1.28
LMO3-209ENST00000447609 PMFBP1Q8TBY8 1022 aa7.03□□□□□ -1.28
LMO3-209ENST00000447609 RCAN3Q9UKA8 241 aa7.03□□□□□ -1.28
LMO3-209ENST00000447609 EIF2AK4Q9P2K8 1649 aaKnown RBP7.03□□□□□ -1.28
LMO3-209ENST00000447609 BECN1Q14457 450 aa7.03□□□□□ -1.28
LMO3-209ENST00000447609 CCDC9Q9Y3X0 531 aaKnown RBP7.03□□□□□ -1.28
LMO3-209ENST00000447609 PRDM15P57071 1507 aaPredicted RBP7.03□□□□□ -1.28
LMO3-209ENST00000447609 C14orf93Q9H972 538 aaKnown RBP7.03□□□□□ -1.28
LMO3-209ENST00000447609 CEP152O94986 1710 aa7.03□□□□□ -1.28
LMO3-209ENST00000447609 GCC2Q8IWJ2 1684 aa7.03□□□□□ -1.28
LMO3-209ENST00000447609 SCAF11Q99590 1463 aaKnown RBP7.02□□□□□ -1.28
LMO3-209ENST00000447609 HSP90AA2PQ14568 343 aaPredicted RBP7.02□□□□□ -1.29
LMO3-209ENST00000447609 TERF2IPQ9NYB0 399 aa7.02□□□□□ -1.29
LMO3-209ENST00000447609 KNSTRNQ9Y448 316 aa7.02□□□□□ -1.29
LMO3-209ENST00000447609 BCORL1Q5H9F3 1711 aa7.02□□□□□ -1.29
LMO3-209ENST00000447609 NUTM2BA6NNL0 878 aaPredicted RBP7.02□□□□□ -1.29
LMO3-209ENST00000447609 NUTM2EB1AL46 878 aaPredicted RBP7.02□□□□□ -1.29
LMO3-209ENST00000447609 NBPF8Q3BBV2 869 aa7.02□□□□□ -1.29
LMO3-209ENST00000447609 CCDC184Q52MB2 194 aa7.02□□□□□ -1.29
LMO3-209ENST00000447609 NUTM2AQ8IVF1 878 aaPredicted RBP7.02□□□□□ -1.29
LMO3-209ENST00000447609 PNNQ9H307 717 aaKnown RBP7.02□□□□□ -1.29
LMO3-209ENST00000447609 CABP2Q9NPB3 220 aa7.02□□□□□ -1.29
LMO3-209ENST00000447609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.01□□□□□ -1.29
LMO3-209ENST00000447609 C19orf44Q9H6X5 657 aa7.01□□□□□ -1.29
LMO3-209ENST00000447609 SPINK5Q9NQ38 1064 aaPredicted RBP7.01□□□□□ -1.29
LMO3-209ENST00000447609 TET3O43151 1660 aa7.01□□□□□ -1.29
LMO3-209ENST00000447609 XPCQ01831 940 aaPredicted RBP7.01□□□□□ -1.29
LMO3-209ENST00000447609 NAP1L5Q96NT1 182 aaPredicted RBP7.01□□□□□ -1.29
LMO3-209ENST00000447609 BRD4O60885 1362 aaPredicted RBP7.01□□□□□ -1.29
LMO3-209ENST00000447609 TNNT2P45379 298 aaPredicted RBP7□□□□□ -1.29
LMO3-209ENST00000447609 RALBP1Q15311 655 aa7□□□□□ -1.29
LMO3-209ENST00000447609 VSIG10Q8N0Z9 540 aa7□□□□□ -1.29
LMO3-209ENST00000447609 PROM2Q8N271 834 aa7□□□□□ -1.29
LMO3-209ENST00000447609 GOLGA6L2Q8N9W4 650 aaPredicted RBP7□□□□□ -1.29
LMO3-209ENST00000447609 CDK19Q9BWU1 502 aa7□□□□□ -1.29
LMO3-209ENST00000447609 REREQ9P2R6 1566 aa7□□□□□ -1.29
LMO3-209ENST00000447609 KIF7Q2M1P5 1343 aa7□□□□□ -1.29
LMO3-209ENST00000447609 FOXO3O43524 673 aa7□□□□□ -1.29
LMO3-209ENST00000447609 FAM161AQ3B820 660 aa7□□□□□ -1.29
LMO3-209ENST00000447609 GPRASP1Q5JY77 1395 aa7□□□□□ -1.29
LMO3-209ENST00000447609 EXOC6Q8TAG9 804 aa7□□□□□ -1.29
LMO3-209ENST00000447609 USP47Q96K76 1375 aa7□□□□□ -1.29
LMO3-209ENST00000447609 CSB-PGBD3P0DP91 1061 aa6.99□□□□□ -1.29
LMO3-209ENST00000447609 CENPQQ7L2Z9 268 aaPredicted RBP6.99□□□□□ -1.29
LMO3-209ENST00000447609 CERKQ8TCT0 537 aa6.99□□□□□ -1.29
LMO3-209ENST00000447609 CAMSAP1Q5T5Y3 1602 aa6.99□□□□□ -1.29
LMO3-209ENST00000447609 NUTM2GQ5VZR2 741 aa6.99□□□□□ -1.29
LMO3-209ENST00000447609 PLEKHG1Q9ULL1 1385 aa6.99□□□□□ -1.29
LMO3-209ENST00000447609 TMEM94Q12767 1356 aa6.98□□□□□ -1.29
LMO3-209ENST00000447609 IQGAP3Q86VI3 1631 aa6.98□□□□□ -1.29
LMO3-209ENST00000447609 UNC13BO14795 1591 aa6.98□□□□□ -1.29
LMO3-209ENST00000447609 PNISRQ8TF01 805 aaKnown RBP6.98□□□□□ -1.29
LMO3-209ENST00000447609 PHF8Q9UPP1 1060 aa6.98□□□□□ -1.29
LMO3-209ENST00000447609 PTPRTO14522 1441 aa6.98□□□□□ -1.29
LMO3-209ENST00000447609 LMTK2Q8IWU2 1503 aa6.97□□□□□ -1.29
LMO3-209ENST00000447609 NUDT16Q96DE0 195 aaKnown RBP6.97□□□□□ -1.29
LMO3-209ENST00000447609 CEP170BQ9Y4F5 1589 aaPredicted RBP6.97□□□□□ -1.29
LMO3-209ENST00000447609 MYBBP1AQ9BQG0 1328 aaKnown RBP6.97□□□□□ -1.29
LMO3-209ENST00000447609 CCDC61Q9Y6R9 512 aa6.97□□□□□ -1.29
LMO3-209ENST00000447609 ZC3H13Q5T200 1668 aaKnown RBP6.97□□□□□ -1.29
LMO3-209ENST00000447609 WASLO00401 505 aaPredicted RBP6.97□□□□□ -1.29
LMO3-209ENST00000447609 CAPN15O75808 1086 aa6.97□□□□□ -1.29
LMO3-209ENST00000447609 EVA1CP58658 441 aa6.97□□□□□ -1.29
LMO3-209ENST00000447609 ABTB2Q8N961 1025 aa6.97□□□□□ -1.29
LMO3-209ENST00000447609 UPF2Q9HAU5 1272 aaKnown RBP6.97□□□□□ -1.29
LMO3-209ENST00000447609 CABP1Q9NZU7 370 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms