RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 CCDC141Q6ZP82 1450 aa13.85□□□□□ -0.19
ZNF550-204ENST00000447310 MRC2Q9UBG0 1479 aa13.85□□□□□ -0.19
ZNF550-204ENST00000447310 ESPNB1AK53 854 aa13.84□□□□□ -0.19
ZNF550-204ENST00000447310 NUCB2P80303 420 aa13.84□□□□□ -0.19
ZNF550-204ENST00000447310 STK31Q9BXU1 1019 aa13.84□□□□□ -0.19
ZNF550-204ENST00000447310 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
ZNF550-204ENST00000447310 SEC24BO95487 1268 aa13.84□□□□□ -0.19
ZNF550-204ENST00000447310 DRC7Q8IY82 874 aa13.84□□□□□ -0.19
ZNF550-204ENST00000447310 RILPL2Q969X0 211 aa13.84□□□□□ -0.19
ZNF550-204ENST00000447310 SCAPERQ9BY12 1400 aa13.83□□□□□ -0.19
ZNF550-204ENST00000447310 NUP153P49790 1475 aaKnown RBP13.83□□□□□ -0.2
ZNF550-204ENST00000447310 CAVIN1Q6NZI2 390 aaKnown RBP13.83□□□□□ -0.2
ZNF550-204ENST00000447310 PCDHB15Q9Y5E8 787 aa13.83□□□□□ -0.2
ZNF550-204ENST00000447310 CDC45O75419 566 aa13.83□□□□□ -0.2
ZNF550-204ENST00000447310 REC8O95072 547 aa13.83□□□□□ -0.2
ZNF550-204ENST00000447310 TBC1D32Q96NH3 1257 aa13.83□□□□□ -0.2
ZNF550-204ENST00000447310 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
ZNF550-204ENST00000447310 FGD1P98174 961 aa13.82□□□□□ -0.2
ZNF550-204ENST00000447310 ZRSR1Q15695 479 aaKnown RBP13.82□□□□□ -0.2
ZNF550-204ENST00000447310 NUTM2FA1L443 756 aa13.82□□□□□ -0.2
ZNF550-204ENST00000447310 PRAG1Q86YV5 1406 aa13.82□□□□□ -0.2
ZNF550-204ENST00000447310 TMEM57Q8N5G2 664 aa13.82□□□□□ -0.2
ZNF550-204ENST00000447310 LAMC3Q9Y6N6 1575 aa13.81□□□□□ -0.2
ZNF550-204ENST00000447310 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
ZNF550-204ENST00000447310 GNAI1P63096 354 aa13.81□□□□□ -0.2
ZNF550-204ENST00000447310 INTS3Q68E01 1043 aaKnown RBP13.81□□□□□ -0.2
ZNF550-204ENST00000447310 CHD1LQ86WJ1 897 aa13.81□□□□□ -0.2
ZNF550-204ENST00000447310 SSH1Q8WYL5 1049 aa13.81□□□□□ -0.2
ZNF550-204ENST00000447310 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
ZNF550-204ENST00000447310 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
ZNF550-204ENST00000447310 R3HCC1Q9Y3T6 440 aaKnown RBP13.81□□□□□ -0.2
ZNF550-204ENST00000447310 MAGI3Q5TCQ9 1506 aa13.8□□□□□ -0.2
ZNF550-204ENST00000447310 KDM2BQ8NHM5 1336 aa13.8□□□□□ -0.2
ZNF550-204ENST00000447310 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.8□□□□□ -0.2
ZNF550-204ENST00000447310 TNNQ9UQP3 1299 aa13.79□□□□□ -0.2
ZNF550-204ENST00000447310 K7ELQ4 463 aaPredicted RBP13.79□□□□□ -0.2
ZNF550-204ENST00000447310 KDM6BO15054 1643 aa13.79□□□□□ -0.2
ZNF550-204ENST00000447310 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
ZNF550-204ENST00000447310 CT47B1P0C2W7 299 aaPredicted RBP13.79□□□□□ -0.2
ZNF550-204ENST00000447310 TAOK2Q9UL54 1235 aa13.79□□□□□ -0.2
ZNF550-204ENST00000447310 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
ZNF550-204ENST00000447310 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
ZNF550-204ENST00000447310 NAP1L2Q9ULW6 460 aaPredicted RBP13.78□□□□□ -0.2
ZNF550-204ENST00000447310 PRPF40AO75400 957 aaKnown RBP13.78□□□□□ -0.2
ZNF550-204ENST00000447310 PHF14O94880 888 aa13.78□□□□□ -0.2
ZNF550-204ENST00000447310 GCC1Q96CN9 775 aa13.78□□□□□ -0.2
ZNF550-204ENST00000447310 GRIN2AQ12879 1464 aa13.78□□□□□ -0.2
ZNF550-204ENST00000447310 COG3Q96JB2 828 aa13.78□□□□□ -0.2
ZNF550-204ENST00000447310 PANK2Q9BZ23 570 aa13.78□□□□□ -0.2
ZNF550-204ENST00000447310 ANO2Q9NQ90 1003 aa13.78□□□□□ -0.2
ZNF550-204ENST00000447310 XRCC6P12956 609 aaKnown RBP eCLIP13.78□□□□□ -0.2
ZNF550-204ENST00000447310 ADGRF5Q8IZF2 1346 aa13.77□□□□□ -0.21
ZNF550-204ENST00000447310 TRIM27P14373 513 aa13.77□□□□□ -0.21
ZNF550-204ENST00000447310 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.21
ZNF550-204ENST00000447310 UHRF1BP1Q6BDS2 1440 aa13.77□□□□□ -0.21
ZNF550-204ENST00000447310 RLBP1P12271 317 aa13.76□□□□□ -0.21
ZNF550-204ENST00000447310 CCDC173Q0VFZ6 552 aa13.76□□□□□ -0.21
ZNF550-204ENST00000447310 WDR62O43379 1518 aa13.76□□□□□ -0.21
ZNF550-204ENST00000447310 RABEP1Q15276 862 aa13.76□□□□□ -0.21
ZNF550-204ENST00000447310 TWISTNBQ3B726 338 aaPredicted RBP13.75□□□□□ -0.21
ZNF550-204ENST00000447310 RBM10P98175 930 aaKnown RBP13.75□□□□□ -0.21
ZNF550-204ENST00000447310 TNPO1Q92973 898 aaKnown RBP13.75□□□□□ -0.21
ZNF550-204ENST00000447310 KIF14Q15058 1648 aa13.74□□□□□ -0.21
ZNF550-204ENST00000447310 NEK4P51957 841 aa13.74□□□□□ -0.21
ZNF550-204ENST00000447310 LMOD2Q6P5Q4 547 aa13.74□□□□□ -0.21
ZNF550-204ENST00000447310 NECTIN2Q92692 538 aa13.74□□□□□ -0.21
ZNF550-204ENST00000447310 SCAF11Q99590 1463 aaKnown RBP13.74□□□□□ -0.21
ZNF550-204ENST00000447310 DNMT1P26358 1616 aaKnown RBP13.74□□□□□ -0.21
ZNF550-204ENST00000447310 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
ZNF550-204ENST00000447310 THUMPD2Q9BTF0 503 aaKnown RBP13.73□□□□□ -0.21
ZNF550-204ENST00000447310 TPM2P07951 284 aa13.73□□□□□ -0.21
ZNF550-204ENST00000447310 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
ZNF550-204ENST00000447310 HDGFP51858 240 aaKnown RBP13.73□□□□□ -0.21
ZNF550-204ENST00000447310 RAPGEF6Q8TEU7 1601 aa13.73□□□□□ -0.21
ZNF550-204ENST00000447310 CSPP1Q1MSJ5 1256 aa13.72□□□□□ -0.21
ZNF550-204ENST00000447310 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.72□□□□□ -0.21
ZNF550-204ENST00000447310 PRAM1Q96QH2 718 aa13.72□□□□□ -0.21
ZNF550-204ENST00000447310 GCC2Q8IWJ2 1684 aa13.72□□□□□ -0.21
ZNF550-204ENST00000447310 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
ZNF550-204ENST00000447310 SAMD9Q5K651 1589 aa13.71□□□□□ -0.22
ZNF550-204ENST00000447310 RRP9O43818 475 aaKnown RBP13.71□□□□□ -0.22
ZNF550-204ENST00000447310 SSFA2P28290 1259 aa13.71□□□□□ -0.22
ZNF550-204ENST00000447310 AMPHP49418 695 aa13.71□□□□□ -0.22
ZNF550-204ENST00000447310 MPNDQ8N594 471 aa13.71□□□□□ -0.22
ZNF550-204ENST00000447310 LTV1Q96GA3 475 aaPredicted RBP13.71□□□□□ -0.22
ZNF550-204ENST00000447310 CABP1Q9NZU7 370 aa13.7□□□□□ -0.22
ZNF550-204ENST00000447310 FAM135AQ9P2D6 1515 aa13.7□□□□□ -0.22
ZNF550-204ENST00000447310 COL17A1Q9UMD9 1497 aaPredicted RBP13.7□□□□□ -0.22
ZNF550-204ENST00000447310 GOLGA6L6A8MZA4 724 aa13.7□□□□□ -0.22
ZNF550-204ENST00000447310 CHMP3Q9Y3E7 222 aa13.7□□□□□ -0.22
ZNF550-204ENST00000447310 ASXL1Q8IXJ9 1541 aa13.7□□□□□ -0.22
ZNF550-204ENST00000447310 FKBP5Q13451 457 aaPredicted RBP13.7□□□□□ -0.22
ZNF550-204ENST00000447310 PKNOX2Q96KN3 472 aa13.7□□□□□ -0.22
ZNF550-204ENST00000447310 CARD14Q9BXL6 1004 aa13.7□□□□□ -0.22
ZNF550-204ENST00000447310 ATP10BO94823 1461 aa13.69□□□□□ -0.22
ZNF550-204ENST00000447310 ZSCAN30Q86W11 494 aa13.68□□□□□ -0.22
ZNF550-204ENST00000447310 UBE2Q2Q8WVN8 375 aa13.68□□□□□ -0.22
ZNF550-204ENST00000447310 RRAGDQ9NQL2 400 aaPredicted RBP13.68□□□□□ -0.22
ZNF550-204ENST00000447310 ATP6V1DQ9Y5K8 247 aa13.68□□□□□ -0.22
ZNF550-204ENST00000447310 BLMP54132 1417 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms