RNA–Protein interactions for RNA: ENST00000429586.6

ABCF3-203, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCF3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-203ENST00000429586 SLC26A8Q96RN1 970 aa22.99■■□□□ 1.27
ABCF3-203ENST00000429586 WAPLQ7Z5K2 1190 aa22.99■■□□□ 1.27
ABCF3-203ENST00000429586 ADAMTS13Q76LX8 1427 aa22.98■■□□□ 1.27
ABCF3-203ENST00000429586 LRPPRCP42704 1394 aaKnown RBP22.97■■□□□ 1.27
ABCF3-203ENST00000429586 PLEKHG1Q9ULL1 1385 aa22.97■■□□□ 1.27
ABCF3-203ENST00000429586 PLEKHH1Q9ULM0 1364 aa22.97■■□□□ 1.27
ABCF3-203ENST00000429586 SETD1BQ9UPS6 1966 aaKnown RBP22.97■■□□□ 1.27
ABCF3-203ENST00000429586 CC2D1BQ5T0F9 858 aaKnown RBP22.96■■□□□ 1.27
ABCF3-203ENST00000429586 CABP2Q9NPB3 220 aa22.95■■□□□ 1.27
ABCF3-203ENST00000429586 TMC1Q8TDI8 760 aa22.95■■□□□ 1.26
ABCF3-203ENST00000429586 EVC2Q86UK5 1308 aa22.94■■□□□ 1.26
ABCF3-203ENST00000429586 ANO8Q9HCE9 1232 aaPredicted RBP22.94■■□□□ 1.26
ABCF3-203ENST00000429586 MRS2Q9HD23 443 aa22.94■■□□□ 1.26
ABCF3-203ENST00000429586 ZNF142P52746 1687 aaPredicted RBP22.93■■□□□ 1.26
ABCF3-203ENST00000429586 ABCC11Q96J66 1382 aa22.92■■□□□ 1.26
ABCF3-203ENST00000429586 SLC12A5Q9H2X9 1139 aa22.92■■□□□ 1.26
ABCF3-203ENST00000429586 DLC1Q96QB1 1528 aa22.91■■□□□ 1.26
ABCF3-203ENST00000429586 KTN1Q86UP2 1357 aaKnown RBP22.91■■□□□ 1.26
ABCF3-203ENST00000429586 SRPK2P78362 688 aaKnown RBP22.91■■□□□ 1.26
ABCF3-203ENST00000429586 KNSTRNQ9Y448 316 aa22.9■■□□□ 1.26
ABCF3-203ENST00000429586 KNDC1Q76NI1 1749 aa22.89■■□□□ 1.25
ABCF3-203ENST00000429586 MED14O60244 1454 aa22.88■■□□□ 1.25
ABCF3-203ENST00000429586 CARD14Q9BXL6 1004 aa22.88■■□□□ 1.25
ABCF3-203ENST00000429586 ERICH6BQ5W0A0 696 aa22.87■■□□□ 1.25
ABCF3-203ENST00000429586 PTPRUQ92729 1446 aa22.86■■□□□ 1.25
ABCF3-203ENST00000429586 FAM9BQ8IZU0 186 aa22.86■■□□□ 1.25
ABCF3-203ENST00000429586 PARD3Q8TEW0 1356 aa22.86■■□□□ 1.25
ABCF3-203ENST00000429586 ROBO2Q9HCK4 1378 aa22.85■■□□□ 1.25
ABCF3-203ENST00000429586 RALBP1Q15311 655 aa22.85■■□□□ 1.25
ABCF3-203ENST00000429586 CDK19Q9BWU1 502 aa22.85■■□□□ 1.25
ABCF3-203ENST00000429586 CPS1P31327 1500 aa22.85■■□□□ 1.25
ABCF3-203ENST00000429586 AMER1Q5JTC6 1135 aaPredicted RBP22.84■■□□□ 1.25
ABCF3-203ENST00000429586 MYBBP1AQ9BQG0 1328 aaKnown RBP22.84■■□□□ 1.25
ABCF3-203ENST00000429586 TECPR2O15040 1411 aa22.83■■□□□ 1.25
ABCF3-203ENST00000429586 ANKLE2Q86XL3 938 aa22.82■■□□□ 1.24
ABCF3-203ENST00000429586 TBX22Q9Y458 520 aa22.81■■□□□ 1.24
ABCF3-203ENST00000429586 AMOTL2Q9Y2J4 779 aa22.81■■□□□ 1.24
ABCF3-203ENST00000429586 FAM135BQ49AJ0 1406 aa22.8■■□□□ 1.24
ABCF3-203ENST00000429586 NSD3Q9BZ95 1437 aa22.8■■□□□ 1.24
ABCF3-203ENST00000429586 EIF5BO60841 1220 aaKnown RBP22.78■■□□□ 1.24
ABCF3-203ENST00000429586 DIP2AQ14689 1571 aa22.78■■□□□ 1.24
ABCF3-203ENST00000429586 PUS7Q96PZ0 661 aaKnown RBP22.78■■□□□ 1.24
ABCF3-203ENST00000429586 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.78■■□□□ 1.24
ABCF3-203ENST00000429586 ATAD2Q6PL18 1390 aa22.76■■□□□ 1.23
ABCF3-203ENST00000429586 WASLO00401 505 aaPredicted RBP22.75■■□□□ 1.23
ABCF3-203ENST00000429586 SIRT1Q96EB6 747 aa22.75■■□□□ 1.23
ABCF3-203ENST00000429586 HNRNPUQ00839 825 aaKnown RBP eCLIP22.75■■□□□ 1.23
ABCF3-203ENST00000429586 NCKAP5LQ9HCH0 1330 aa22.74■■□□□ 1.23
ABCF3-203ENST00000429586 KDM4FA0A1W2PPD8 638 aa22.74■■□□□ 1.23
ABCF3-203ENST00000429586 NLRP13Q86W25 1043 aa22.74■■□□□ 1.23
ABCF3-203ENST00000429586 CABP1Q9NZU7 370 aa22.74■■□□□ 1.23
ABCF3-203ENST00000429586 A0A1W2PP64 1363 aa22.74■■□□□ 1.23
ABCF3-203ENST00000429586 ANKRD36BQ8N2N9 1353 aa22.74■■□□□ 1.23
ABCF3-203ENST00000429586 BRD4O60885 1362 aaPredicted RBP22.73■■□□□ 1.23
ABCF3-203ENST00000429586 KCNA6P17658 529 aa22.73■■□□□ 1.23
ABCF3-203ENST00000429586 XRN1Q8IZH2 1706 aaKnown RBP22.73■■□□□ 1.23
ABCF3-203ENST00000429586 NUTM2FA1L443 756 aa22.72■■□□□ 1.23
ABCF3-203ENST00000429586 SENP3-EIF4A1A0A087X0R7 540 aa22.71■■□□□ 1.23
ABCF3-203ENST00000429586 CD163L1Q9NR16 1453 aa22.71■■□□□ 1.23
ABCF3-203ENST00000429586 PPP2R1AP30153 589 aa22.7■■□□□ 1.22
ABCF3-203ENST00000429586 SALL2Q9Y467 1007 aaPredicted RBP22.7■■□□□ 1.22
ABCF3-203ENST00000429586 PNISRQ8TF01 805 aaKnown RBP22.7■■□□□ 1.22
ABCF3-203ENST00000429586 NPC1L1Q9UHC9 1359 aa22.7■■□□□ 1.22
ABCF3-203ENST00000429586 NPHP4O75161 1426 aaPredicted RBP22.69■■□□□ 1.22
ABCF3-203ENST00000429586 NINLQ9Y2I6 1382 aa22.69■■□□□ 1.22
ABCF3-203ENST00000429586 CHD2O14647 1828 aaKnown RBP22.68■■□□□ 1.22
ABCF3-203ENST00000429586 TNNT2P45379 298 aaPredicted RBP22.68■■□□□ 1.22
ABCF3-203ENST00000429586 NUDT16Q96DE0 195 aaKnown RBP22.68■■□□□ 1.22
ABCF3-203ENST00000429586 RBM33Q96EV2 1170 aaKnown RBP22.68■■□□□ 1.22
ABCF3-203ENST00000429586 PTCH1Q13635 1447 aa22.68■■□□□ 1.22
ABCF3-203ENST00000429586 HSPA2P54652 639 aa22.67■■□□□ 1.22
ABCF3-203ENST00000429586 TERF2IPQ9NYB0 399 aa22.67■■□□□ 1.22
ABCF3-203ENST00000429586 PPIP5K1Q6PFW1 1433 aa22.66■■□□□ 1.22
ABCF3-203ENST00000429586 PRR36Q9H6K5 1346 aa22.66■■□□□ 1.22
ABCF3-203ENST00000429586 CGNL1Q0VF96 1302 aa22.66■■□□□ 1.22
ABCF3-203ENST00000429586 USP32Q8NFA0 1604 aa22.66■■□□□ 1.22
ABCF3-203ENST00000429586 ADGRB2O60241 1585 aa22.66■■□□□ 1.22
ABCF3-203ENST00000429586 HDGFL2Q7Z4V5 671 aaPredicted RBP22.64■■□□□ 1.21
ABCF3-203ENST00000429586 ATP7BP35670 1465 aa22.64■■□□□ 1.21
ABCF3-203ENST00000429586 PIK3R4Q99570 1358 aa22.64■■□□□ 1.21
ABCF3-203ENST00000429586 MORC1Q86VD1 984 aa22.63■■□□□ 1.21
ABCF3-203ENST00000429586 NOP58Q9Y2X3 529 aaKnown RBP22.62■■□□□ 1.21
ABCF3-203ENST00000429586 RGPD8O14715 1765 aaPredicted RBP22.62■■□□□ 1.21
ABCF3-203ENST00000429586 GGNBP2Q9H3C7 697 aa22.61■■□□□ 1.21
ABCF3-203ENST00000429586 CCDC61Q9Y6R9 512 aa22.61■■□□□ 1.21
ABCF3-203ENST00000429586 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.61■■□□□ 1.21
ABCF3-203ENST00000429586 ITSN1Q15811 1721 aa22.57■■□□□ 1.2
ABCF3-203ENST00000429586 NALCNQ8IZF0 1738 aa22.57■■□□□ 1.2
ABCF3-203ENST00000429586 KIF20BQ96Q89 1820 aa22.57■■□□□ 1.2
ABCF3-203ENST00000429586 FYB1O15117 783 aa22.57■■□□□ 1.2
ABCF3-203ENST00000429586 CDC42BPGQ6DT37 1551 aa22.57■■□□□ 1.2
ABCF3-203ENST00000429586 TOPAZ1Q8N9V7 1692 aa22.56■■□□□ 1.2
ABCF3-203ENST00000429586 UBE2Q2Q8WVN8 375 aa22.56■■□□□ 1.2
ABCF3-203ENST00000429586 NBR1Q14596 966 aa22.55■■□□□ 1.2
ABCF3-203ENST00000429586 CPSF1Q10570 1443 aaKnown RBP22.55■■□□□ 1.2
ABCF3-203ENST00000429586 AKAP12Q02952 1782 aa22.55■■□□□ 1.2
ABCF3-203ENST00000429586 PPP4R2Q9NY27 417 aa22.55■■□□□ 1.2
ABCF3-203ENST00000429586 NKTRP30414 1462 aaKnown RBP22.54■■□□□ 1.2
ABCF3-203ENST00000429586 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
ABCF3-203ENST00000429586 NSD2O96028 1365 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms