RNA–Protein interactions for RNA: ENST00000425515.6

VNN3-207, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-207ENST00000425515 POLR3GLQ9BT43 218 aa8.22□□□□□ -1.09
VNN3-207ENST00000425515 RRAGDQ9NQL2 400 aaPredicted RBP8.22□□□□□ -1.09
VNN3-207ENST00000425515 WDR7Q9Y4E6 1490 aa8.21□□□□□ -1.09
VNN3-207ENST00000425515 KANK1Q14678 1352 aa8.21□□□□□ -1.09
VNN3-207ENST00000425515 IQGAP3Q86VI3 1631 aa8.21□□□□□ -1.09
VNN3-207ENST00000425515 KDM5CP41229 1560 aa8.21□□□□□ -1.1
VNN3-207ENST00000425515 RGL2O15211 777 aa8.21□□□□□ -1.1
VNN3-207ENST00000425515 FRAT2O75474 233 aaPredicted RBP8.21□□□□□ -1.1
VNN3-207ENST00000425515 CHGAP10645 457 aaKnown RBP8.21□□□□□ -1.1
VNN3-207ENST00000425515 BECN1Q14457 450 aa8.21□□□□□ -1.1
VNN3-207ENST00000425515 MAP7D2Q96T17 732 aa8.21□□□□□ -1.1
VNN3-207ENST00000425515 ABCC1P33527 1531 aa8.21□□□□□ -1.1
VNN3-207ENST00000425515 MAGI2Q86UL8 1455 aa8.21□□□□□ -1.1
VNN3-207ENST00000425515 DHX37Q8IY37 1157 aaKnown RBP8.2□□□□□ -1.1
VNN3-207ENST00000425515 TMC1Q8TDI8 760 aa8.2□□□□□ -1.1
VNN3-207ENST00000425515 RALBP1Q15311 655 aa8.2□□□□□ -1.1
VNN3-207ENST00000425515 CREBZFQ9NS37 354 aa8.2□□□□□ -1.1
VNN3-207ENST00000425515 TERF1P54274 439 aa8.19□□□□□ -1.1
VNN3-207ENST00000425515 TAF7LQ5H9L4 462 aa8.19□□□□□ -1.1
VNN3-207ENST00000425515 PRAG1Q86YV5 1406 aa8.19□□□□□ -1.1
VNN3-207ENST00000425515 GPRASP1Q5JY77 1395 aa8.19□□□□□ -1.1
VNN3-207ENST00000425515 EIF2AK4Q9P2K8 1649 aaKnown RBP8.18□□□□□ -1.1
VNN3-207ENST00000425515 ST20-MTHFSA0A0A6YYL1 179 aa8.18□□□□□ -1.1
VNN3-207ENST00000425515 GOLGA6L3A6NEY3 463 aa8.18□□□□□ -1.1
VNN3-207ENST00000425515 RGS22Q8NE09 1264 aa8.18□□□□□ -1.1
VNN3-207ENST00000425515 TRAPPC8Q9Y2L5 1435 aa8.18□□□□□ -1.1
VNN3-207ENST00000425515 FSD2A1L4K1 749 aa8.17□□□□□ -1.1
VNN3-207ENST00000425515 FANCAO15360 1455 aa8.17□□□□□ -1.1
VNN3-207ENST00000425515 KDM2BQ8NHM5 1336 aa8.17□□□□□ -1.1
VNN3-207ENST00000425515 MYBBP1AQ9BQG0 1328 aaKnown RBP8.17□□□□□ -1.1
VNN3-207ENST00000425515 MRE11P49959 708 aa8.17□□□□□ -1.1
VNN3-207ENST00000425515 PDE4CQ08493 712 aa8.17□□□□□ -1.1
VNN3-207ENST00000425515 RGL3Q3MIN7 710 aa8.17□□□□□ -1.1
VNN3-207ENST00000425515 LAMC1P11047 1609 aa8.16□□□□□ -1.1
VNN3-207ENST00000425515 APBB1O00213 710 aa8.16□□□□□ -1.1
VNN3-207ENST00000425515 CLCN6P51797 869 aa8.16□□□□□ -1.1
VNN3-207ENST00000425515 TMF1P82094 1093 aa8.16□□□□□ -1.1
VNN3-207ENST00000425515 CDCA8Q53HL2 280 aa8.16□□□□□ -1.1
VNN3-207ENST00000425515 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.16□□□□□ -1.1
VNN3-207ENST00000425515 MTERF4Q7Z6M4 381 aaKnown RBP8.16□□□□□ -1.1
VNN3-207ENST00000425515 ZMYM3Q14202 1370 aa8.16□□□□□ -1.1
VNN3-207ENST00000425515 PLA2R1Q13018 1463 aa8.16□□□□□ -1.1
VNN3-207ENST00000425515 ABCA9Q8IUA7 1624 aa8.16□□□□□ -1.1
VNN3-207ENST00000425515 NCLP19338 710 aaKnown RBP8.15□□□□□ -1.1
VNN3-207ENST00000425515 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.1
VNN3-207ENST00000425515 C8orf34Q49A92 452 aa8.15□□□□□ -1.1
VNN3-207ENST00000425515 AFAP1Q8N556 730 aa8.15□□□□□ -1.1
VNN3-207ENST00000425515 VIRMAQ69YN4 1812 aaKnown RBP8.15□□□□□ -1.1
VNN3-207ENST00000425515 ADGRL1O94910 1474 aa8.15□□□□□ -1.11
VNN3-207ENST00000425515 A2MP01023 1474 aa8.15□□□□□ -1.11
VNN3-207ENST00000425515 ZRANB1Q9UGI0 708 aa8.15□□□□□ -1.11
VNN3-207ENST00000425515 ZFYVE16Q7Z3T8 1539 aa8.14□□□□□ -1.11
VNN3-207ENST00000425515 ASXL2Q76L83 1435 aa8.14□□□□□ -1.11
VNN3-207ENST00000425515 SCAPERQ9BY12 1400 aa8.14□□□□□ -1.11
VNN3-207ENST00000425515 EIF3AQ14152 1382 aaKnown RBP8.14□□□□□ -1.11
VNN3-207ENST00000425515 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.14□□□□□ -1.11
VNN3-207ENST00000425515 MTMR7Q9Y216 660 aa8.14□□□□□ -1.11
VNN3-207ENST00000425515 TRPM1Q7Z4N2 1603 aa8.14□□□□□ -1.11
VNN3-207ENST00000425515 ATP7AQ04656 1500 aa8.14□□□□□ -1.11
VNN3-207ENST00000425515 PTPRTO14522 1441 aa8.14□□□□□ -1.11
VNN3-207ENST00000425515 BCORL1Q5H9F3 1711 aa8.13□□□□□ -1.11
VNN3-207ENST00000425515 ESPNB1AK53 854 aa8.13□□□□□ -1.11
VNN3-207ENST00000425515 XRCC6P12956 609 aaKnown RBP eCLIP8.13□□□□□ -1.11
VNN3-207ENST00000425515 PTMSP20962 102 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 TMCO4Q5TGY1 634 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 ZNF579Q8NAF0 562 aaKnown RBP8.12□□□□□ -1.11
VNN3-207ENST00000425515 MYH16Q9H6N6 1097 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 POGKQ9P215 609 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 NEURL4Q96JN8 1562 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 ZNF518AQ6AHZ1 1483 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 TRPM2O94759 1503 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 PRDM15P57071 1507 aaPredicted RBP8.12□□□□□ -1.11
VNN3-207ENST00000425515 CFAP74Q9C0B2 1584 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 KIF3BO15066 747 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 LHX8Q68G74 356 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 NLRP13Q86W25 1043 aa8.12□□□□□ -1.11
VNN3-207ENST00000425515 INO80Q9ULG1 1556 aaPredicted RBP8.11□□□□□ -1.11
VNN3-207ENST00000425515 DEPDC5O75140 1603 aa8.11□□□□□ -1.11
VNN3-207ENST00000425515 SLC4A3P48751 1232 aa8.11□□□□□ -1.11
VNN3-207ENST00000425515 NBPF1Q3BBV0 1214 aa8.11□□□□□ -1.11
VNN3-207ENST00000425515 MAPK8IP3Q9UPT6 1336 aa8.11□□□□□ -1.11
VNN3-207ENST00000425515 TET3O43151 1660 aa8.1□□□□□ -1.11
VNN3-207ENST00000425515 COL17A1Q9UMD9 1497 aaPredicted RBP8.1□□□□□ -1.11
VNN3-207ENST00000425515 FGD1P98174 961 aa8.1□□□□□ -1.11
VNN3-207ENST00000425515 AAMPQ13685 434 aa8.1□□□□□ -1.11
VNN3-207ENST00000425515 SMAP1Q8IYB5 467 aaPredicted RBP8.1□□□□□ -1.11
VNN3-207ENST00000425515 TRIM44Q96DX7 344 aaPredicted RBP8.1□□□□□ -1.11
VNN3-207ENST00000425515 PRDM4Q9UKN5 801 aa8.1□□□□□ -1.11
VNN3-207ENST00000425515 BLMP54132 1417 aaPredicted RBP8.1□□□□□ -1.11
VNN3-207ENST00000425515 RBM10P98175 930 aaKnown RBP8.1□□□□□ -1.11
VNN3-207ENST00000425515 DCBLD2Q96PD2 775 aa8.1□□□□□ -1.11
VNN3-207ENST00000425515 CRBNQ96SW2 442 aa8.1□□□□□ -1.11
VNN3-207ENST00000425515 TRAIPQ9BWF2 469 aa8.1□□□□□ -1.11
VNN3-207ENST00000425515 ANTXR1Q9H6X2 564 aa8.1□□□□□ -1.11
VNN3-207ENST00000425515 UPF2Q9HAU5 1272 aaKnown RBP8.1□□□□□ -1.11
VNN3-207ENST00000425515 VWDEQ8N2E2 1590 aa8.09□□□□□ -1.11
VNN3-207ENST00000425515 CD109Q6YHK3 1445 aa8.09□□□□□ -1.11
VNN3-207ENST00000425515 POTEIP0CG38 1075 aa8.09□□□□□ -1.11
VNN3-207ENST00000425515 TESK2Q96S53 571 aa8.09□□□□□ -1.11
VNN3-207ENST00000425515 E9PCH4 1651 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms