RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 UHRF1BP1Q6BDS2 1440 aa14.23□□□□□ -0.13
SEC61A1-202ENST00000424880 HSCBQ8IWL3 235 aa14.22□□□□□ -0.13
SEC61A1-202ENST00000424880 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
SEC61A1-202ENST00000424880 TRAPPC8Q9Y2L5 1435 aa14.22□□□□□ -0.13
SEC61A1-202ENST00000424880 NASPP49321 788 aaPredicted RBP14.22□□□□□ -0.13
SEC61A1-202ENST00000424880 WDR7Q9Y4E6 1490 aa14.21□□□□□ -0.13
SEC61A1-202ENST00000424880 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
SEC61A1-202ENST00000424880 TSC1Q92574 1164 aa14.21□□□□□ -0.13
SEC61A1-202ENST00000424880 CGNL1Q0VF96 1302 aa14.21□□□□□ -0.14
SEC61A1-202ENST00000424880 KDM5DQ9BY66 1539 aa14.2□□□□□ -0.14
SEC61A1-202ENST00000424880 DDX11L8A8MPP1 907 aa14.2□□□□□ -0.14
SEC61A1-202ENST00000424880 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
SEC61A1-202ENST00000424880 MAST1Q9Y2H9 1570 aa14.2□□□□□ -0.14
SEC61A1-202ENST00000424880 CD2BP2O95400 341 aaKnown RBP14.2□□□□□ -0.14
SEC61A1-202ENST00000424880 TMF1P82094 1093 aa14.19□□□□□ -0.14
SEC61A1-202ENST00000424880 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
SEC61A1-202ENST00000424880 UQCRHLA0A096LP55 91 aa14.19□□□□□ -0.14
SEC61A1-202ENST00000424880 UQCRHP07919 91 aa14.19□□□□□ -0.14
SEC61A1-202ENST00000424880 HSP90AB1P08238 724 aaKnown RBP14.19□□□□□ -0.14
SEC61A1-202ENST00000424880 ASXL2Q76L83 1435 aa14.19□□□□□ -0.14
SEC61A1-202ENST00000424880 ISY1Q9ULR0 285 aaKnown RBP14.19□□□□□ -0.14
SEC61A1-202ENST00000424880 ABCC1P33527 1531 aa14.18□□□□□ -0.14
SEC61A1-202ENST00000424880 NKTRP30414 1462 aaKnown RBP14.18□□□□□ -0.14
SEC61A1-202ENST00000424880 FAM177BA6PVY3 158 aa14.18□□□□□ -0.14
SEC61A1-202ENST00000424880 ZSCAN30Q86W11 494 aa14.18□□□□□ -0.14
SEC61A1-202ENST00000424880 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
SEC61A1-202ENST00000424880 CHAMP1Q96JM3 812 aa14.18□□□□□ -0.14
SEC61A1-202ENST00000424880 ABCA9Q8IUA7 1624 aa14.18□□□□□ -0.14
SEC61A1-202ENST00000424880 FAM135AQ9P2D6 1515 aa14.17□□□□□ -0.14
SEC61A1-202ENST00000424880 OFD1O75665 1012 aa14.17□□□□□ -0.14
SEC61A1-202ENST00000424880 SSFA2P28290 1259 aa14.17□□□□□ -0.14
SEC61A1-202ENST00000424880 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-202ENST00000424880 TRMT2AQ8IZ69 625 aaKnown RBP14.17□□□□□ -0.14
SEC61A1-202ENST00000424880 E9PSI1 815 aa14.17□□□□□ -0.14
SEC61A1-202ENST00000424880 DDX49Q9Y6V7 483 aaKnown RBP14.17□□□□□ -0.14
SEC61A1-202ENST00000424880 TERF1P54274 439 aa14.16□□□□□ -0.14
SEC61A1-202ENST00000424880 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
SEC61A1-202ENST00000424880 ANP32BQ92688 251 aaKnown RBP14.15□□□□□ -0.14
SEC61A1-202ENST00000424880 PLXNC1O60486 1568 aa14.15□□□□□ -0.14
SEC61A1-202ENST00000424880 PMFBP1Q8TBY8 1022 aa14.15□□□□□ -0.14
SEC61A1-202ENST00000424880 MAP7D2Q96T17 732 aa14.15□□□□□ -0.14
SEC61A1-202ENST00000424880 WWC1Q8IX03 1113 aa14.14□□□□□ -0.15
SEC61A1-202ENST00000424880 IGSF3O75054 1194 aa14.14□□□□□ -0.15
SEC61A1-202ENST00000424880 CAVIN1Q6NZI2 390 aaKnown RBP14.13□□□□□ -0.15
SEC61A1-202ENST00000424880 FANCAO15360 1455 aa14.13□□□□□ -0.15
SEC61A1-202ENST00000424880 RARSP54136 660 aaKnown RBP14.13□□□□□ -0.15
SEC61A1-202ENST00000424880 TPRNQ4KMQ1 711 aa14.13□□□□□ -0.15
SEC61A1-202ENST00000424880 CFAP74Q9C0B2 1584 aa14.13□□□□□ -0.15
SEC61A1-202ENST00000424880 RWDD1Q9H446 243 aaPredicted RBP14.13□□□□□ -0.15
SEC61A1-202ENST00000424880 PLA2R1Q13018 1463 aa14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 ARAP3Q8WWN8 1544 aa14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 CCDC173Q0VFZ6 552 aa14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 ERBINQ96RT1 1412 aa14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 MAGI2Q86UL8 1455 aa14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 FOXD4L5Q5VV16 416 aaPredicted RBP14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 SMAP1Q8IYB5 467 aaPredicted RBP14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 FOXD4L4Q8WXT5 416 aaPredicted RBP14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 GBP4Q96PP9 640 aa14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 SPAG9O60271 1321 aaKnown RBP14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 DUOX2Q9NRD8 1548 aa14.12□□□□□ -0.15
SEC61A1-202ENST00000424880 UNC13BO14795 1591 aa14.11□□□□□ -0.15
SEC61A1-202ENST00000424880 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.11□□□□□ -0.15
SEC61A1-202ENST00000424880 LNPKQ9C0E8 428 aa14.11□□□□□ -0.15
SEC61A1-202ENST00000424880 RNF214Q8ND24 703 aa14.11□□□□□ -0.15
SEC61A1-202ENST00000424880 RBM27Q9P2N5 1060 aaKnown RBP14.11□□□□□ -0.15
SEC61A1-202ENST00000424880 MCTP1Q6DN14 999 aa14.11□□□□□ -0.15
SEC61A1-202ENST00000424880 PDE4CQ08493 712 aa14.1□□□□□ -0.15
SEC61A1-202ENST00000424880 FTSJ3Q8IY81 847 aaKnown RBP14.1□□□□□ -0.15
SEC61A1-202ENST00000424880 TSPOAP1O95153 1857 aa14.1□□□□□ -0.15
SEC61A1-202ENST00000424880 CBX1P83916 185 aa14.1□□□□□ -0.15
SEC61A1-202ENST00000424880 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.1□□□□□ -0.15
SEC61A1-202ENST00000424880 PKP1Q13835 747 aa14.09□□□□□ -0.15
SEC61A1-202ENST00000424880 RBSNQ9H1K0 784 aa14.09□□□□□ -0.15
SEC61A1-202ENST00000424880 RTEL1-TNFRSF6BF6WH68 1400 aa14.09□□□□□ -0.15
SEC61A1-202ENST00000424880 SCAPERQ9BY12 1400 aa14.09□□□□□ -0.15
SEC61A1-202ENST00000424880 AK9Q5TCS8 1911 aa14.09□□□□□ -0.15
SEC61A1-202ENST00000424880 ZFYVE16Q7Z3T8 1539 aa14.08□□□□□ -0.15
SEC61A1-202ENST00000424880 RAB3GAP1Q15042 981 aa14.08□□□□□ -0.16
SEC61A1-202ENST00000424880 ITPRIPQ8IWB1 547 aa14.08□□□□□ -0.16
SEC61A1-202ENST00000424880 GAS2L2Q8NHY3 880 aa14.08□□□□□ -0.16
SEC61A1-202ENST00000424880 PRAG1Q86YV5 1406 aa14.08□□□□□ -0.16
SEC61A1-202ENST00000424880 PRIM1P49642 420 aaKnown RBP14.08□□□□□ -0.16
SEC61A1-202ENST00000424880 FAM69CQ0P6D2 419 aa14.08□□□□□ -0.16
SEC61A1-202ENST00000424880 TSR2Q969E8 191 aaKnown RBP14.08□□□□□ -0.16
SEC61A1-202ENST00000424880 COL17A1Q9UMD9 1497 aaPredicted RBP14.07□□□□□ -0.16
SEC61A1-202ENST00000424880 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
SEC61A1-202ENST00000424880 PPP1R9BQ96SB3 815 aa14.07□□□□□ -0.16
SEC61A1-202ENST00000424880 ADGRL1O94910 1474 aa14.07□□□□□ -0.16
SEC61A1-202ENST00000424880 DDIT3P35638 169 aa14.07□□□□□ -0.16
SEC61A1-202ENST00000424880 DNTTIP2Q5QJE6 756 aaKnown RBP14.07□□□□□ -0.16
SEC61A1-202ENST00000424880 CCDC144AA2RUR9 1427 aa14.06□□□□□ -0.16
SEC61A1-202ENST00000424880 IQGAP3Q86VI3 1631 aa14.06□□□□□ -0.16
SEC61A1-202ENST00000424880 ZNF830Q96NB3 372 aaPredicted RBP14.05□□□□□ -0.16
SEC61A1-202ENST00000424880 FOXD4L6Q3SYB3 417 aaPredicted RBP14.05□□□□□ -0.16
SEC61A1-202ENST00000424880 FOXD4L3Q6VB84 417 aaPredicted RBP14.05□□□□□ -0.16
SEC61A1-202ENST00000424880 BBXQ8WY36 941 aaPredicted RBP14.05□□□□□ -0.16
SEC61A1-202ENST00000424880 ZMYM3Q14202 1370 aa14.05□□□□□ -0.16
SEC61A1-202ENST00000424880 C17orf53Q8N3J3 647 aaPredicted RBP14.05□□□□□ -0.16
SEC61A1-202ENST00000424880 TCP11L2Q8N4U5 519 aa14.05□□□□□ -0.16
SEC61A1-202ENST00000424880 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms