RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 NCLP19338 710 aaKnown RBP18.8■□□□□ 0.6
SH3PXD2A-204ENST00000420222 NUTM2DQ5VT03 806 aaPredicted RBP18.8■□□□□ 0.6
SH3PXD2A-204ENST00000420222 AFAP1Q8N556 730 aa18.8■□□□□ 0.6
SH3PXD2A-204ENST00000420222 DDX11L8A8MPP1 907 aa18.79■□□□□ 0.6
SH3PXD2A-204ENST00000420222 EXOSC9Q06265 439 aaKnown RBP18.79■□□□□ 0.6
SH3PXD2A-204ENST00000420222 GAS2L3Q86XJ1 694 aa18.79■□□□□ 0.6
SH3PXD2A-204ENST00000420222 TNPO1Q92973 898 aaKnown RBP18.79■□□□□ 0.6
SH3PXD2A-204ENST00000420222 ABCA8O94911 1581 aa18.79■□□□□ 0.6
SH3PXD2A-204ENST00000420222 ZBTB7CA1YPR0 619 aa18.78■□□□□ 0.6
SH3PXD2A-204ENST00000420222 ADGRF5Q8IZF2 1346 aa18.78■□□□□ 0.6
SH3PXD2A-204ENST00000420222 NUP160Q12769 1436 aa18.78■□□□□ 0.6
SH3PXD2A-204ENST00000420222 NSD3Q9BZ95 1437 aa18.78■□□□□ 0.6
SH3PXD2A-204ENST00000420222 TMEM132EQ6IEE7 984 aa18.77■□□□□ 0.6
SH3PXD2A-204ENST00000420222 ABCC2Q92887 1545 aa18.77■□□□□ 0.6
SH3PXD2A-204ENST00000420222 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
SH3PXD2A-204ENST00000420222 NINLQ9Y2I6 1382 aa18.76■□□□□ 0.59
SH3PXD2A-204ENST00000420222 ARHGEF5Q12774 1597 aa18.76■□□□□ 0.59
SH3PXD2A-204ENST00000420222 CDC42BPBQ9Y5S2 1711 aa18.76■□□□□ 0.59
SH3PXD2A-204ENST00000420222 TRIM27P14373 513 aa18.76■□□□□ 0.59
SH3PXD2A-204ENST00000420222 C1orf115Q9H7X2 142 aa18.76■□□□□ 0.59
SH3PXD2A-204ENST00000420222 SYNMO15061 1565 aa18.76■□□□□ 0.59
SH3PXD2A-204ENST00000420222 RBM42Q9BTD8 480 aaKnown RBP18.75■□□□□ 0.59
SH3PXD2A-204ENST00000420222 KIF3BO15066 747 aa18.75■□□□□ 0.59
SH3PXD2A-204ENST00000420222 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
SH3PXD2A-204ENST00000420222 CLASP1Q7Z460 1538 aa18.75■□□□□ 0.59
SH3PXD2A-204ENST00000420222 NOB1Q9ULX3 412 aaKnown RBP18.74■□□□□ 0.59
SH3PXD2A-204ENST00000420222 SSH1Q8WYL5 1049 aa18.73■□□□□ 0.59
SH3PXD2A-204ENST00000420222 TMEM57Q8N5G2 664 aa18.73■□□□□ 0.59
SH3PXD2A-204ENST00000420222 LAMC1P11047 1609 aa18.73■□□□□ 0.59
SH3PXD2A-204ENST00000420222 RBM10P98175 930 aaKnown RBP18.73■□□□□ 0.59
SH3PXD2A-204ENST00000420222 GBP4Q96PP9 640 aa18.73■□□□□ 0.59
SH3PXD2A-204ENST00000420222 SPAG9O60271 1321 aaKnown RBP18.72■□□□□ 0.59
SH3PXD2A-204ENST00000420222 CD2BP2O95400 341 aaKnown RBP18.71■□□□□ 0.59
SH3PXD2A-204ENST00000420222 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
SH3PXD2A-204ENST00000420222 RRP9O43818 475 aaKnown RBP18.7■□□□□ 0.58
SH3PXD2A-204ENST00000420222 SSFA2P28290 1259 aa18.7■□□□□ 0.58
SH3PXD2A-204ENST00000420222 ANP32BQ92688 251 aaKnown RBP18.7■□□□□ 0.58
SH3PXD2A-204ENST00000420222 ELL2O00472 640 aaPredicted RBP18.69■□□□□ 0.58
SH3PXD2A-204ENST00000420222 WDR63Q8IWG1 891 aa18.69■□□□□ 0.58
SH3PXD2A-204ENST00000420222 MADDQ8WXG6 1647 aa18.69■□□□□ 0.58
SH3PXD2A-204ENST00000420222 NGEFQ8N5V2 710 aa18.69■□□□□ 0.58
SH3PXD2A-204ENST00000420222 DDX49Q9Y6V7 483 aaKnown RBP18.69■□□□□ 0.58
SH3PXD2A-204ENST00000420222 TTC37Q6PGP7 1564 aa18.69■□□□□ 0.58
SH3PXD2A-204ENST00000420222 KIAA1211Q6ZU35 1233 aa18.69■□□□□ 0.58
SH3PXD2A-204ENST00000420222 UNC13BO14795 1591 aa18.69■□□□□ 0.58
SH3PXD2A-204ENST00000420222 MAST1Q9Y2H9 1570 aa18.69■□□□□ 0.58
SH3PXD2A-204ENST00000420222 KDM5AP29375 1690 aaKnown RBP18.68■□□□□ 0.58
SH3PXD2A-204ENST00000420222 DDX19BQ9UMR2 479 aa18.68■□□□□ 0.58
SH3PXD2A-204ENST00000420222 ERVK-7P63135 1459 aa18.68■□□□□ 0.58
SH3PXD2A-204ENST00000420222 RNF17Q9BXT8 1623 aaKnown RBP18.68■□□□□ 0.58
SH3PXD2A-204ENST00000420222 EFCAB2Q5VUJ9 269 aa18.68■□□□□ 0.58
SH3PXD2A-204ENST00000420222 POLR3AO14802 1390 aaPredicted RBP18.67■□□□□ 0.58
SH3PXD2A-204ENST00000420222 IQGAP3Q86VI3 1631 aa18.67■□□□□ 0.58
SH3PXD2A-204ENST00000420222 MYOM1P52179 1685 aa18.67■□□□□ 0.58
SH3PXD2A-204ENST00000420222 NASPP49321 788 aaPredicted RBP18.67■□□□□ 0.58
SH3PXD2A-204ENST00000420222 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
SH3PXD2A-204ENST00000420222 PREX2Q70Z35 1606 aa18.67■□□□□ 0.58
SH3PXD2A-204ENST00000420222 FOXD4L5Q5VV16 416 aaPredicted RBP18.66■□□□□ 0.58
SH3PXD2A-204ENST00000420222 FOXD4L4Q8WXT5 416 aaPredicted RBP18.66■□□□□ 0.58
SH3PXD2A-204ENST00000420222 ZNF692Q9BU19 519 aaPredicted RBP18.66■□□□□ 0.58
SH3PXD2A-204ENST00000420222 IQGAP1P46940 1657 aa18.66■□□□□ 0.58
SH3PXD2A-204ENST00000420222 NPC1L1Q9UHC9 1359 aa18.66■□□□□ 0.58
SH3PXD2A-204ENST00000420222 GGNBP2Q9H3C7 697 aa18.66■□□□□ 0.58
SH3PXD2A-204ENST00000420222 APBB1O00213 710 aa18.65■□□□□ 0.58
SH3PXD2A-204ENST00000420222 MSNP26038 577 aaKnown RBP18.65■□□□□ 0.58
SH3PXD2A-204ENST00000420222 TPRNQ4KMQ1 711 aa18.65■□□□□ 0.58
SH3PXD2A-204ENST00000420222 UGGT1Q9NYU2 1555 aa18.65■□□□□ 0.58
SH3PXD2A-204ENST00000420222 RTEL1-TNFRSF6BF6WH68 1400 aa18.64■□□□□ 0.57
SH3PXD2A-204ENST00000420222 TRAPPC8Q9Y2L5 1435 aa18.64■□□□□ 0.57
SH3PXD2A-204ENST00000420222 GOLGA6L22H0YM25 854 aa18.64■□□□□ 0.57
SH3PXD2A-204ENST00000420222 CABP2Q9NPB3 220 aa18.64■□□□□ 0.57
SH3PXD2A-204ENST00000420222 DUOX2Q9NRD8 1548 aa18.63■□□□□ 0.57
SH3PXD2A-204ENST00000420222 MCTP1Q6DN14 999 aa18.63■□□□□ 0.57
SH3PXD2A-204ENST00000420222 FAM13BQ9NYF5 915 aa18.63■□□□□ 0.57
SH3PXD2A-204ENST00000420222 ATP10AO60312 1499 aa18.63■□□□□ 0.57
SH3PXD2A-204ENST00000420222 AAMPQ13685 434 aa18.62■□□□□ 0.57
SH3PXD2A-204ENST00000420222 RIPK4P57078 832 aa18.62■□□□□ 0.57
SH3PXD2A-204ENST00000420222 CAVIN1Q6NZI2 390 aaKnown RBP18.62■□□□□ 0.57
SH3PXD2A-204ENST00000420222 CHD1LQ86WJ1 897 aa18.62■□□□□ 0.57
SH3PXD2A-204ENST00000420222 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
SH3PXD2A-204ENST00000420222 STK26Q9P289 416 aa18.62■□□□□ 0.57
SH3PXD2A-204ENST00000420222 R3HCC1Q9Y3T6 440 aaKnown RBP18.61■□□□□ 0.57
SH3PXD2A-204ENST00000420222 AK9Q5TCS8 1911 aa18.61■□□□□ 0.57
SH3PXD2A-204ENST00000420222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.61■□□□□ 0.57
SH3PXD2A-204ENST00000420222 CEP152O94986 1710 aa18.6■□□□□ 0.57
SH3PXD2A-204ENST00000420222 SCAPERQ9BY12 1400 aa18.59■□□□□ 0.57
SH3PXD2A-204ENST00000420222 HDAC1Q13547 482 aaPredicted RBP18.59■□□□□ 0.57
SH3PXD2A-204ENST00000420222 RAB3GAP1Q15042 981 aa18.59■□□□□ 0.57
SH3PXD2A-204ENST00000420222 CHAMP1Q96JM3 812 aa18.59■□□□□ 0.57
SH3PXD2A-204ENST00000420222 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
SH3PXD2A-204ENST00000420222 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
SH3PXD2A-204ENST00000420222 KANK1Q14678 1352 aa18.59■□□□□ 0.57
SH3PXD2A-204ENST00000420222 K7ELQ4 463 aaPredicted RBP18.59■□□□□ 0.57
SH3PXD2A-204ENST00000420222 SMC5Q8IY18 1101 aa18.59■□□□□ 0.57
SH3PXD2A-204ENST00000420222 CLTCL1P53675 1640 aa18.58■□□□□ 0.57
SH3PXD2A-204ENST00000420222 PLXNC1O60486 1568 aa18.58■□□□□ 0.56
SH3PXD2A-204ENST00000420222 FBLN1P23142 703 aa18.58■□□□□ 0.56
SH3PXD2A-204ENST00000420222 TBC1D9Q6ZT07 1266 aa18.58■□□□□ 0.56
SH3PXD2A-204ENST00000420222 SRPK2P78362 688 aaKnown RBP18.57■□□□□ 0.56
SH3PXD2A-204ENST00000420222 MPNDQ8N594 471 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms