RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 RAB3IL1Q8TBN0 382 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.92□□□□□ -1.62
RGPD1-202ENST00000409776 RABGAP1Q9Y3P9 1069 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 V9GYY5 206 aaPredicted RBP4.92□□□□□ -1.62
RGPD1-202ENST00000409776 CT47B1P0C2W7 299 aaPredicted RBP4.92□□□□□ -1.62
RGPD1-202ENST00000409776 CFAP58Q5T655 872 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 HNRNPUQ00839 825 aaKnown RBP eCLIP4.92□□□□□ -1.62
RGPD1-202ENST00000409776 CWC22Q9HCG8 908 aaKnown RBP4.92□□□□□ -1.62
RGPD1-202ENST00000409776 SAFB2Q14151 953 aaKnown RBP eCLIP4.92□□□□□ -1.62
RGPD1-202ENST00000409776 BRD3Q15059 726 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 DPF3Q92784 378 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 TRIM17Q9Y577 477 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 CCDC160A6NGH7 325 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 PMFBP1Q8TBY8 1022 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 CACTINQ8WUQ7 758 aaKnown RBP4.92□□□□□ -1.62
RGPD1-202ENST00000409776 USP6NLQ92738 828 aa4.92□□□□□ -1.62
RGPD1-202ENST00000409776 KIF5AQ12840 1032 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 CCDC50Q8IVM0 306 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 STAMBPO95630 424 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 CCDC152Q4G0S7 254 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 CNPY4Q8N129 248 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 CCDC148Q8NFR7 591 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 NUP133Q8WUM0 1156 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 TIGD1Q96MW7 591 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 NCAPGQ9BPX3 1015 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 FRMD3A2A2Y4 597 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 HOXD11P31277 338 aaPredicted RBP4.91□□□□□ -1.62
RGPD1-202ENST00000409776 RPGRQ92834 1020 aaKnown RBP4.91□□□□□ -1.62
RGPD1-202ENST00000409776 POLD1P28340 1107 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 MRE11P49959 708 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 PUS7Q96PZ0 661 aaKnown RBP4.91□□□□□ -1.62
RGPD1-202ENST00000409776 NASPP49321 788 aaPredicted RBP4.91□□□□□ -1.62
RGPD1-202ENST00000409776 PLCB4Q15147 1175 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 TAX1BP1Q86VP1 789 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 CCDC146Q8IYE0 955 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 SPRYD3Q8NCJ5 442 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 CCDC39Q9UFE4 941 aa4.91□□□□□ -1.62
RGPD1-202ENST00000409776 ZNF853P0CG23 659 aa4.9□□□□□ -1.62
RGPD1-202ENST00000409776 NOL3O60936 208 aaKnown RBP4.9□□□□□ -1.62
RGPD1-202ENST00000409776 ZFYP08048 801 aaPredicted RBP4.9□□□□□ -1.62
RGPD1-202ENST00000409776 PDE1CQ14123 709 aaPredicted RBP4.9□□□□□ -1.62
RGPD1-202ENST00000409776 BANK1Q8NDB2 785 aa4.9□□□□□ -1.62
RGPD1-202ENST00000409776 FBXO2Q9UK22 296 aaPredicted RBP4.9□□□□□ -1.62
RGPD1-202ENST00000409776 GFAPP14136 432 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 RBM10P98175 930 aaKnown RBP4.9□□□□□ -1.63
RGPD1-202ENST00000409776 SETDB1Q15047 1291 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 HNRNPUL2Q1KMD3 747 aaKnown RBP4.9□□□□□ -1.63
RGPD1-202ENST00000409776 FAM43AQ8N2R8 423 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 CALCOCO1Q9P1Z2 691 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 RBM19Q9Y4C8 960 aaKnown RBP4.9□□□□□ -1.63
RGPD1-202ENST00000409776 ZBTB41Q5SVQ8 909 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 ARMCX6Q7L4S7 300 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 FMNL3Q8IVF7 1028 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 GBP7Q8N8V2 638 aaPredicted RBP4.9□□□□□ -1.63
RGPD1-202ENST00000409776 MORC4Q8TE76 937 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 SLC26A8Q96RN1 970 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 CTAGE1Q96RT6 745 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 IFT57Q9NWB7 429 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 PPP4R2Q9NY27 417 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 UBAP1Q9NZ09 502 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 STMN1P16949 149 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 KCNJ4P48050 445 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 AAMPQ13685 434 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 MCM6Q14566 821 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 TMC1Q8TDI8 760 aa4.9□□□□□ -1.63
RGPD1-202ENST00000409776 TSPYL2Q9H2G4 693 aaPredicted RBP4.9□□□□□ -1.63
RGPD1-202ENST00000409776 MNAT1P51948 309 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 BASP1P80723 227 aaKnown RBP4.89□□□□□ -1.63
RGPD1-202ENST00000409776 STMN2Q93045 179 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 FEZ1Q99689 392 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 EPB41L2O43491 1005 aaKnown RBP4.89□□□□□ -1.63
RGPD1-202ENST00000409776 HIP1RO75146 1068 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 ANAPC15P60006 121 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 RBM33Q96EV2 1170 aaKnown RBP4.89□□□□□ -1.63
RGPD1-202ENST00000409776 POLE3Q9NRF9 147 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 CEP83Q9Y592 693 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 IPO7O95373 1038 aaKnown RBP4.89□□□□□ -1.63
RGPD1-202ENST00000409776 CSB-PGBD3P0DP91 1061 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 CALCOCO2Q13137 446 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 RABEP1Q15276 862 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 NAA16Q6N069 864 aaPredicted RBP4.89□□□□□ -1.63
RGPD1-202ENST00000409776 RUFY3Q7L099 469 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 POTEB2H3BUK9 544 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 POLR3GO15318 223 aaPredicted RBP4.89□□□□□ -1.63
RGPD1-202ENST00000409776 WDHD1O75717 1129 aaPredicted RBP4.89□□□□□ -1.63
RGPD1-202ENST00000409776 CCDC27Q2M243 656 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 LRRC23Q53EV4 343 aaPredicted RBP4.89□□□□□ -1.63
RGPD1-202ENST00000409776 CNKSR2Q8WXI2 1034 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 APBB1O00213 710 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 TNIP1Q15025 636 aa4.89□□□□□ -1.63
RGPD1-202ENST00000409776 PAIP2BQ9ULR5 123 aaKnown RBP4.89□□□□□ -1.63
RGPD1-202ENST00000409776 ANKRD20A12PQ8NF67 263 aa4.88□□□□□ -1.63
RGPD1-202ENST00000409776 DIAPH1O60610 1272 aaKnown RBP4.88□□□□□ -1.63
RGPD1-202ENST00000409776 CEBPZQ03701 1054 aaKnown RBP4.88□□□□□ -1.63
RGPD1-202ENST00000409776 TPD52L1Q16890 204 aaPredicted RBP4.88□□□□□ -1.63
RGPD1-202ENST00000409776 CEP128Q6ZU80 1094 aa4.88□□□□□ -1.63
RGPD1-202ENST00000409776 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.88□□□□□ -1.63
RGPD1-202ENST00000409776 TTC36A6NLP5 189 aa4.88□□□□□ -1.63
RGPD1-202ENST00000409776 RPUSD2Q8IZ73 545 aaKnown RBP4.88□□□□□ -1.63
RGPD1-202ENST00000409776 LRRCC1Q9C099 1032 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms