RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 CC2D1BQ5T0F9 858 aaKnown RBP20.32■□□□□ 0.84
LIMK2-204ENST00000406516 PIK3C2GO75747 1445 aa20.31■□□□□ 0.84
LIMK2-204ENST00000406516 ADAMTS13Q76LX8 1427 aa20.31■□□□□ 0.84
LIMK2-204ENST00000406516 NRXN1Q9ULB1 1477 aa20.31■□□□□ 0.84
LIMK2-204ENST00000406516 LAMC1P11047 1609 aa20.29■□□□□ 0.84
LIMK2-204ENST00000406516 C14orf93Q9H972 538 aaKnown RBP20.29■□□□□ 0.84
LIMK2-204ENST00000406516 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
LIMK2-204ENST00000406516 TBX22Q9Y458 520 aa20.29■□□□□ 0.84
LIMK2-204ENST00000406516 TMEM132EQ6IEE7 984 aa20.28■□□□□ 0.84
LIMK2-204ENST00000406516 PANK3Q9H999 370 aa20.28■□□□□ 0.84
LIMK2-204ENST00000406516 NRXN3Q9Y4C0 1643 aa20.28■□□□□ 0.84
LIMK2-204ENST00000406516 IQGAP1P46940 1657 aa20.27■□□□□ 0.84
LIMK2-204ENST00000406516 METP08581 1390 aa20.27■□□□□ 0.84
LIMK2-204ENST00000406516 RRP1P56182 461 aaKnown RBP20.27■□□□□ 0.83
LIMK2-204ENST00000406516 SETBP1Q9Y6X0 1596 aa20.26■□□□□ 0.83
LIMK2-204ENST00000406516 TMF1P82094 1093 aa20.26■□□□□ 0.83
LIMK2-204ENST00000406516 RCAN3Q9UKA8 241 aa20.25■□□□□ 0.83
LIMK2-204ENST00000406516 ALKQ9UM73 1620 aa20.25■□□□□ 0.83
LIMK2-204ENST00000406516 EXOC6Q8TAG9 804 aa20.21■□□□□ 0.83
LIMK2-204ENST00000406516 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
LIMK2-204ENST00000406516 ZNF335Q9H4Z2 1342 aaPredicted RBP20.21■□□□□ 0.83
LIMK2-204ENST00000406516 PDE3BQ13370 1112 aa20.2■□□□□ 0.82
LIMK2-204ENST00000406516 STK26Q9P289 416 aa20.2■□□□□ 0.82
LIMK2-204ENST00000406516 PTPRUQ92729 1446 aa20.2■□□□□ 0.82
LIMK2-204ENST00000406516 AMOTL2Q9Y2J4 779 aa20.19■□□□□ 0.82
LIMK2-204ENST00000406516 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
LIMK2-204ENST00000406516 SETD1AO15047 1707 aaKnown RBP20.17■□□□□ 0.82
LIMK2-204ENST00000406516 KCNA6P17658 529 aa20.17■□□□□ 0.82
LIMK2-204ENST00000406516 DIP2AQ14689 1571 aa20.16■□□□□ 0.82
LIMK2-204ENST00000406516 BLMP54132 1417 aaPredicted RBP20.16■□□□□ 0.82
LIMK2-204ENST00000406516 ADGRB1O14514 1584 aa20.15■□□□□ 0.82
LIMK2-204ENST00000406516 RBM33Q96EV2 1170 aaKnown RBP20.15■□□□□ 0.82
LIMK2-204ENST00000406516 TRAK1Q9UPV9 953 aa20.15■□□□□ 0.82
LIMK2-204ENST00000406516 PIK3R4Q99570 1358 aa20.15■□□□□ 0.82
LIMK2-204ENST00000406516 NOP58Q9Y2X3 529 aaKnown RBP20.14■□□□□ 0.82
LIMK2-204ENST00000406516 YTHDC2Q9H6S0 1430 aaKnown RBP20.13■□□□□ 0.81
LIMK2-204ENST00000406516 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
LIMK2-204ENST00000406516 PLIN1O60240 522 aa20.11■□□□□ 0.81
LIMK2-204ENST00000406516 PAK3O75914 559 aaPredicted RBP20.11■□□□□ 0.81
LIMK2-204ENST00000406516 ANP32AP39687 249 aaKnown RBP20.11■□□□□ 0.81
LIMK2-204ENST00000406516 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
LIMK2-204ENST00000406516 ABCC11Q96J66 1382 aa20.1■□□□□ 0.81
LIMK2-204ENST00000406516 WAPLQ7Z5K2 1190 aa20.1■□□□□ 0.81
LIMK2-204ENST00000406516 INSRP06213 1382 aa20.1■□□□□ 0.81
LIMK2-204ENST00000406516 ROBO2Q9HCK4 1378 aa20.1■□□□□ 0.81
LIMK2-204ENST00000406516 ADAMTS8Q9UP79 889 aa20.1■□□□□ 0.81
LIMK2-204ENST00000406516 STRCP1A6NGW2 1772 aa20.09■□□□□ 0.81
LIMK2-204ENST00000406516 CHD2O14647 1828 aaKnown RBP20.09■□□□□ 0.81
LIMK2-204ENST00000406516 PROSER2Q86WR7 435 aaPredicted RBP20.08■□□□□ 0.81
LIMK2-204ENST00000406516 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
LIMK2-204ENST00000406516 SAFB2Q14151 953 aaKnown RBP eCLIP20.07■□□□□ 0.8
LIMK2-204ENST00000406516 PRAM1Q96QH2 718 aa20.06■□□□□ 0.8
LIMK2-204ENST00000406516 PLEKHH1Q9ULM0 1364 aa20.06■□□□□ 0.8
LIMK2-204ENST00000406516 AMER1Q5JTC6 1135 aaPredicted RBP20.05■□□□□ 0.8
LIMK2-204ENST00000406516 IPO9Q96P70 1041 aaKnown RBP20.05■□□□□ 0.8
LIMK2-204ENST00000406516 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
LIMK2-204ENST00000406516 NWD1Q149M9 1564 aa20.05■□□□□ 0.8
LIMK2-204ENST00000406516 TECPR2O15040 1411 aa20.05■□□□□ 0.8
LIMK2-204ENST00000406516 WDR43Q15061 677 aaKnown RBP eCLIP20.05■□□□□ 0.8
LIMK2-204ENST00000406516 CDCA8Q53HL2 280 aa20.05■□□□□ 0.8
LIMK2-204ENST00000406516 LTBP4Q8N2S1 1624 aa20.04■□□□□ 0.8
LIMK2-204ENST00000406516 POGKQ9P215 609 aa20.03■□□□□ 0.8
LIMK2-204ENST00000406516 TMEM94Q12767 1356 aa20.03■□□□□ 0.8
LIMK2-204ENST00000406516 TCERG1O14776 1098 aaKnown RBP20.02■□□□□ 0.8
LIMK2-204ENST00000406516 CRBNQ96SW2 442 aa20.02■□□□□ 0.8
LIMK2-204ENST00000406516 SIRT1Q96EB6 747 aa20.02■□□□□ 0.8
LIMK2-204ENST00000406516 LRRC7Q96NW7 1537 aa20.02■□□□□ 0.79
LIMK2-204ENST00000406516 PTCH1Q13635 1447 aa20.01■□□□□ 0.79
LIMK2-204ENST00000406516 NKTRP30414 1462 aaKnown RBP20.01■□□□□ 0.79
LIMK2-204ENST00000406516 NBR1Q14596 966 aa20.01■□□□□ 0.79
LIMK2-204ENST00000406516 BCL11AQ9H165 835 aa20.01■□□□□ 0.79
LIMK2-204ENST00000406516 NPM2Q86SE8 214 aaKnown RBP20■□□□□ 0.79
LIMK2-204ENST00000406516 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
LIMK2-204ENST00000406516 CPS1P31327 1500 aa19.99■□□□□ 0.79
LIMK2-204ENST00000406516 FAM135BQ49AJ0 1406 aa19.99■□□□□ 0.79
LIMK2-204ENST00000406516 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
LIMK2-204ENST00000406516 ZBTB47Q9UFB7 747 aaPredicted RBP19.99■□□□□ 0.79
LIMK2-204ENST00000406516 DLC1Q96QB1 1528 aa19.98■□□□□ 0.79
LIMK2-204ENST00000406516 CENPJQ9HC77 1338 aaPredicted RBP19.98■□□□□ 0.79
LIMK2-204ENST00000406516 C20orf194Q5TEA3 1177 aa19.98■□□□□ 0.79
LIMK2-204ENST00000406516 PDE4AP27815 886 aa19.97■□□□□ 0.79
LIMK2-204ENST00000406516 MINK1Q8N4C8 1332 aaPredicted RBP19.97■□□□□ 0.79
LIMK2-204ENST00000406516 MYOM1P52179 1685 aa19.97■□□□□ 0.79
LIMK2-204ENST00000406516 KNDC1Q76NI1 1749 aa19.97■□□□□ 0.79
LIMK2-204ENST00000406516 ARHGEF28Q8N1W1 1705 aaKnown RBP19.96■□□□□ 0.79
LIMK2-204ENST00000406516 SKAP1Q86WV1 359 aa19.95■□□□□ 0.78
LIMK2-204ENST00000406516 DUSP27Q5VZP5 1158 aa19.94■□□□□ 0.78
LIMK2-204ENST00000406516 CCDC146Q8IYE0 955 aa19.94■□□□□ 0.78
LIMK2-204ENST00000406516 CERKQ8TCT0 537 aa19.93■□□□□ 0.78
LIMK2-204ENST00000406516 GOLGA2Q08379 1002 aa19.93■□□□□ 0.78
LIMK2-204ENST00000406516 BACH2Q9BYV9 841 aa19.93■□□□□ 0.78
LIMK2-204ENST00000406516 C19orf44Q9H6X5 657 aa19.93■□□□□ 0.78
LIMK2-204ENST00000406516 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.93■□□□□ 0.78
LIMK2-204ENST00000406516 MS4A1P11836 297 aa19.92■□□□□ 0.78
LIMK2-204ENST00000406516 ZNF521Q96K83 1311 aa19.92■□□□□ 0.78
LIMK2-204ENST00000406516 XIRP1Q702N8 1843 aaKnown RBP19.91■□□□□ 0.78
LIMK2-204ENST00000406516 ADGRL3Q9HAR2 1447 aa19.9■□□□□ 0.78
LIMK2-204ENST00000406516 NCOA3Q9Y6Q9 1424 aa19.9■□□□□ 0.78
LIMK2-204ENST00000406516 NPC1L1Q9UHC9 1359 aa19.9■□□□□ 0.78
LIMK2-204ENST00000406516 NUTM2FA1L443 756 aa19.89■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms