RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 SETQ01105 290 aaPredicted RBP25.96■■□□□ 1.75
ANKRD28-201ENST00000399451 HOOK1Q9UJC3 728 aaKnown RBP25.96■■□□□ 1.75
ANKRD28-201ENST00000399451 AIMP1Q12904 312 aaKnown RBP25.96■■□□□ 1.75
ANKRD28-201ENST00000399451 HSP90AB4PQ58FF6 505 aa25.96■■□□□ 1.75
ANKRD28-201ENST00000399451 LRRC9Q6ZRR7 1453 aa25.95■■□□□ 1.74
ANKRD28-201ENST00000399451 PCMTD1Q96MG8 357 aaPredicted RBP25.95■■□□□ 1.74
ANKRD28-201ENST00000399451 FYB1O15117 783 aa25.95■■□□□ 1.74
ANKRD28-201ENST00000399451 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.95■■□□□ 1.74
ANKRD28-201ENST00000399451 VPS37CA5D8V6 355 aaPredicted RBP25.94■■□□□ 1.74
ANKRD28-201ENST00000399451 FGD5Q6ZNL6 1462 aa25.94■■□□□ 1.74
ANKRD28-201ENST00000399451 PANK1Q8TE04 598 aa25.94■■□□□ 1.74
ANKRD28-201ENST00000399451 ANKRD20A12PQ8NF67 263 aa25.94■■□□□ 1.74
ANKRD28-201ENST00000399451 GAPVD1Q14C86 1478 aa25.93■■□□□ 1.74
ANKRD28-201ENST00000399451 ERC2O15083 957 aa25.93■■□□□ 1.74
ANKRD28-201ENST00000399451 CCDC27Q2M243 656 aa25.93■■□□□ 1.74
ANKRD28-201ENST00000399451 CDC45O75419 566 aa25.92■■□□□ 1.74
ANKRD28-201ENST00000399451 HMOX1P09601 288 aa25.92■■□□□ 1.74
ANKRD28-201ENST00000399451 IGF1RP08069 1367 aa25.92■■□□□ 1.74
ANKRD28-201ENST00000399451 SASS6Q6UVJ0 657 aa25.92■■□□□ 1.74
ANKRD28-201ENST00000399451 WASHC2AQ641Q2 1341 aa25.91■■□□□ 1.74
ANKRD28-201ENST00000399451 NFKBIBQ15653 356 aa25.91■■□□□ 1.74
ANKRD28-201ENST00000399451 SF3B2Q13435 895 aaKnown RBP25.91■■□□□ 1.74
ANKRD28-201ENST00000399451 IPO7O95373 1038 aaKnown RBP25.9■■□□□ 1.74
ANKRD28-201ENST00000399451 ZNF771Q7L3S4 317 aaPredicted RBP25.9■■□□□ 1.74
ANKRD28-201ENST00000399451 NEUROD6Q96NK8 337 aa25.9■■□□□ 1.74
ANKRD28-201ENST00000399451 PPP1R1BQ9UD71 204 aaPredicted RBP25.89■■□□□ 1.74
ANKRD28-201ENST00000399451 HOMER1Q86YM7 354 aa25.89■■□□□ 1.74
ANKRD28-201ENST00000399451 FYCO1Q9BQS8 1478 aa25.89■■□□□ 1.73
ANKRD28-201ENST00000399451 GPRASP1Q5JY77 1395 aa25.89■■□□□ 1.73
ANKRD28-201ENST00000399451 NLRP6P59044 892 aa25.88■■□□□ 1.73
ANKRD28-201ENST00000399451 ESCO1Q5FWF5 840 aa25.88■■□□□ 1.73
ANKRD28-201ENST00000399451 VSIG10Q8N0Z9 540 aa25.88■■□□□ 1.73
ANKRD28-201ENST00000399451 ZNF644Q9H582 1327 aaPredicted RBP25.88■■□□□ 1.73
ANKRD28-201ENST00000399451 FAM43AQ8N2R8 423 aa25.88■■□□□ 1.73
ANKRD28-201ENST00000399451 FAM177BA6PVY3 158 aa25.87■■□□□ 1.73
ANKRD28-201ENST00000399451 ANKRD50Q9ULJ7 1429 aa25.87■■□□□ 1.73
ANKRD28-201ENST00000399451 PROSER2Q86WR7 435 aaPredicted RBP25.86■■□□□ 1.73
ANKRD28-201ENST00000399451 FAM13BQ9NYF5 915 aa25.86■■□□□ 1.73
ANKRD28-201ENST00000399451 CABP2Q9NPB3 220 aa25.86■■□□□ 1.73
ANKRD28-201ENST00000399451 ADAMTS8Q9UP79 889 aa25.86■■□□□ 1.73
ANKRD28-201ENST00000399451 STRN4Q9NRL3 753 aa25.85■■□□□ 1.73
ANKRD28-201ENST00000399451 CCDC73Q6ZRK6 1079 aa25.85■■□□□ 1.73
ANKRD28-201ENST00000399451 NINLQ9Y2I6 1382 aa25.85■■□□□ 1.73
ANKRD28-201ENST00000399451 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.85■■□□□ 1.73
ANKRD28-201ENST00000399451 NCOA2Q15596 1464 aa25.84■■□□□ 1.73
ANKRD28-201ENST00000399451 WASHC4Q2M389 1173 aa25.84■■□□□ 1.73
ANKRD28-201ENST00000399451 ABTB2Q8N961 1025 aa25.84■■□□□ 1.73
ANKRD28-201ENST00000399451 GGNBP2Q9H3C7 697 aa25.84■■□□□ 1.73
ANKRD28-201ENST00000399451 RBM42Q9BTD8 480 aaKnown RBP25.83■■□□□ 1.73
ANKRD28-201ENST00000399451 TEX35Q5T0J7 233 aa25.83■■□□□ 1.73
ANKRD28-201ENST00000399451 MRE11P49959 708 aa25.83■■□□□ 1.72
ANKRD28-201ENST00000399451 NUTM2BA6NNL0 878 aaPredicted RBP25.82■■□□□ 1.72
ANKRD28-201ENST00000399451 NUTM2EB1AL46 878 aaPredicted RBP25.82■■□□□ 1.72
ANKRD28-201ENST00000399451 NUTM2AQ8IVF1 878 aaPredicted RBP25.82■■□□□ 1.72
ANKRD28-201ENST00000399451 CASKIN1Q8WXD9 1431 aa25.82■■□□□ 1.72
ANKRD28-201ENST00000399451 IKQ13123 557 aaPredicted RBP25.81■■□□□ 1.72
ANKRD28-201ENST00000399451 KIF6Q6ZMV9 814 aa25.81■■□□□ 1.72
ANKRD28-201ENST00000399451 UBTFL1P0CB47 393 aaPredicted RBP25.81■■□□□ 1.72
ANKRD28-201ENST00000399451 FOSBP53539 338 aa25.81■■□□□ 1.72
ANKRD28-201ENST00000399451 MTMR7Q9Y216 660 aa25.81■■□□□ 1.72
ANKRD28-201ENST00000399451 TXNDC2Q86VQ3 553 aa25.81■■□□□ 1.72
ANKRD28-201ENST00000399451 RAD54L2Q9Y4B4 1467 aa25.81■■□□□ 1.72
ANKRD28-201ENST00000399451 CCDC39Q9UFE4 941 aa25.8■■□□□ 1.72
ANKRD28-201ENST00000399451 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.8■■□□□ 1.72
ANKRD28-201ENST00000399451 IFT57Q9NWB7 429 aa25.8■■□□□ 1.72
ANKRD28-201ENST00000399451 SAFBQ15424 915 aaKnown RBP eCLIP25.79■■□□□ 1.72
ANKRD28-201ENST00000399451 FBXO3Q9UK99 471 aa25.79■■□□□ 1.72
ANKRD28-201ENST00000399451 TMEM132EQ6IEE7 984 aa25.79■■□□□ 1.72
ANKRD28-201ENST00000399451 NASPP49321 788 aaPredicted RBP25.78■■□□□ 1.72
ANKRD28-201ENST00000399451 ARHGAP5Q13017 1502 aa25.78■■□□□ 1.72
ANKRD28-201ENST00000399451 RALYLQ86SE5 291 aaKnown RBP25.78■■□□□ 1.72
ANKRD28-201ENST00000399451 CNTROBQ8N137 903 aa25.78■■□□□ 1.72
ANKRD28-201ENST00000399451 RRBP1Q9P2E9 1410 aaKnown RBP25.78■■□□□ 1.72
ANKRD28-201ENST00000399451 PSMA5P28066 241 aa25.77■■□□□ 1.72
ANKRD28-201ENST00000399451 CCAR1Q8IX12 1150 aaKnown RBP25.77■■□□□ 1.72
ANKRD28-201ENST00000399451 PPP2R1AP30153 589 aa25.76■■□□□ 1.71
ANKRD28-201ENST00000399451 R3HCC1Q9Y3T6 440 aaKnown RBP25.76■■□□□ 1.71
ANKRD28-201ENST00000399451 MTHFSP49914 203 aa25.75■■□□□ 1.71
ANKRD28-201ENST00000399451 CDCA7LQ96GN5 454 aa25.75■■□□□ 1.71
ANKRD28-201ENST00000399451 NAT10Q9H0A0 1025 aaKnown RBP25.75■■□□□ 1.71
ANKRD28-201ENST00000399451 TCP11L2Q8N4U5 519 aa25.75■■□□□ 1.71
ANKRD28-201ENST00000399451 ARGLU1Q9NWB6 273 aaPredicted RBP25.74■■□□□ 1.71
ANKRD28-201ENST00000399451 LETM1O95202 739 aaPredicted RBP25.73■■□□□ 1.71
ANKRD28-201ENST00000399451 MNS1Q8NEH6 495 aa25.73■■□□□ 1.71
ANKRD28-201ENST00000399451 SMG6Q86US8 1419 aaKnown RBP25.73■■□□□ 1.71
ANKRD28-201ENST00000399451 TRAK2O60296 914 aa25.73■■□□□ 1.71
ANKRD28-201ENST00000399451 PLEKHO1Q53GL0 409 aaPredicted RBP25.72■■□□□ 1.71
ANKRD28-201ENST00000399451 PDZRN3Q9UPQ7 1066 aa25.72■■□□□ 1.71
ANKRD28-201ENST00000399451 OLFM4Q6UX06 510 aa25.71■■□□□ 1.71
ANKRD28-201ENST00000399451 SCAPERQ9BY12 1400 aa25.71■■□□□ 1.71
ANKRD28-201ENST00000399451 GNAI3P08754 354 aa25.71■■□□□ 1.71
ANKRD28-201ENST00000399451 BRMS1Q9HCU9 246 aa25.71■■□□□ 1.71
ANKRD28-201ENST00000399451 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.75e-7■■■■■ 27.6
ANKRD28-201ENST00000399451 CCDC30Q5VVM6 783 aa25.7■■□□□ 1.7
ANKRD28-201ENST00000399451 TBC1D2BQ9UPU7 963 aa25.69■■□□□ 1.7
ANKRD28-201ENST00000399451 PIP4K2BP78356 416 aa25.69■■□□□ 1.7
ANKRD28-201ENST00000399451 FSD1Q9BTV5 496 aa25.69■■□□□ 1.7
ANKRD28-201ENST00000399451 TATP17735 454 aaPredicted RBP25.68■■□□□ 1.7
ANKRD28-201ENST00000399451 GCC1Q96CN9 775 aa25.68■■□□□ 1.7
ANKRD28-201ENST00000399451 PDE3AQ14432 1141 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms