RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 TRIM27P14373 513 aa20.5■□□□□ 0.87
PHTF1-205ENST00000393357 XPCQ01831 940 aaPredicted RBP20.5■□□□□ 0.87
PHTF1-205ENST00000393357 MCTP1Q6DN14 999 aa20.5■□□□□ 0.87
PHTF1-205ENST00000393357 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
PHTF1-205ENST00000393357 TMEM57Q8N5G2 664 aa20.49■□□□□ 0.87
PHTF1-205ENST00000393357 WDR7Q9Y4E6 1490 aa20.49■□□□□ 0.87
PHTF1-205ENST00000393357 CAVIN1Q6NZI2 390 aaKnown RBP20.49■□□□□ 0.87
PHTF1-205ENST00000393357 GBP4Q96PP9 640 aa20.49■□□□□ 0.87
PHTF1-205ENST00000393357 SSH1Q8WYL5 1049 aa20.49■□□□□ 0.87
PHTF1-205ENST00000393357 KDM5DQ9BY66 1539 aa20.48■□□□□ 0.87
PHTF1-205ENST00000393357 NOL8Q76FK4 1167 aaKnown RBP20.48■□□□□ 0.87
PHTF1-205ENST00000393357 RNF214Q8ND24 703 aa20.48■□□□□ 0.87
PHTF1-205ENST00000393357 ERCC6Q03468 1493 aa20.48■□□□□ 0.87
PHTF1-205ENST00000393357 AFAP1Q8N556 730 aa20.47■□□□□ 0.87
PHTF1-205ENST00000393357 A0A0U1RQG5 324 aaPredicted RBP20.47■□□□□ 0.87
PHTF1-205ENST00000393357 NLRP1Q9C000 1473 aa20.46■□□□□ 0.87
PHTF1-205ENST00000393357 FBLN1P23142 703 aa20.46■□□□□ 0.87
PHTF1-205ENST00000393357 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
PHTF1-205ENST00000393357 SYNJ2O15056 1496 aa20.45■□□□□ 0.86
PHTF1-205ENST00000393357 ADGRL2O95490 1459 aa20.45■□□□□ 0.86
PHTF1-205ENST00000393357 RBM27Q9P2N5 1060 aaKnown RBP20.44■□□□□ 0.86
PHTF1-205ENST00000393357 E9PCH4 1651 aa20.44■□□□□ 0.86
PHTF1-205ENST00000393357 ADGRF5Q8IZF2 1346 aa20.43■□□□□ 0.86
PHTF1-205ENST00000393357 GAS2L2Q8NHY3 880 aa20.43■□□□□ 0.86
PHTF1-205ENST00000393357 THUMPD2Q9BTF0 503 aaKnown RBP20.43■□□□□ 0.86
PHTF1-205ENST00000393357 INSRP06213 1382 aa20.43■□□□□ 0.86
PHTF1-205ENST00000393357 PKP1Q13835 747 aa20.42■□□□□ 0.86
PHTF1-205ENST00000393357 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
PHTF1-205ENST00000393357 GGNBP2Q9H3C7 697 aa20.42■□□□□ 0.86
PHTF1-205ENST00000393357 STK26Q9P289 416 aa20.42■□□□□ 0.86
PHTF1-205ENST00000393357 GPRASP1Q5JY77 1395 aa20.42■□□□□ 0.86
PHTF1-205ENST00000393357 GOLGA6L22H0YM25 854 aa20.41■□□□□ 0.86
PHTF1-205ENST00000393357 JARID2Q92833 1246 aaPredicted RBP20.41■□□□□ 0.86
PHTF1-205ENST00000393357 KIF3BO15066 747 aa20.4■□□□□ 0.86
PHTF1-205ENST00000393357 ASXL1Q8IXJ9 1541 aa20.39■□□□□ 0.86
PHTF1-205ENST00000393357 TRPM1Q7Z4N2 1603 aa20.39■□□□□ 0.86
PHTF1-205ENST00000393357 DNTTIP2Q5QJE6 756 aaKnown RBP20.39■□□□□ 0.85
PHTF1-205ENST00000393357 ZNF692Q9BU19 519 aaPredicted RBP20.39■□□□□ 0.85
PHTF1-205ENST00000393357 FAM177BA6PVY3 158 aa20.38■□□□□ 0.85
PHTF1-205ENST00000393357 TSC1Q92574 1164 aa20.38■□□□□ 0.85
PHTF1-205ENST00000393357 BCL11BQ9C0K0 894 aaPredicted RBP20.38■□□□□ 0.85
PHTF1-205ENST00000393357 PRPF40AO75400 957 aaKnown RBP20.38■□□□□ 0.85
PHTF1-205ENST00000393357 NUP160Q12769 1436 aa20.38■□□□□ 0.85
PHTF1-205ENST00000393357 CARMIL2Q6F5E8 1435 aa20.38■□□□□ 0.85
PHTF1-205ENST00000393357 ATF7IPQ6VMQ6 1270 aa20.37■□□□□ 0.85
PHTF1-205ENST00000393357 ATP10BO94823 1461 aa20.37■□□□□ 0.85
PHTF1-205ENST00000393357 CABP2Q9NPB3 220 aa20.37■□□□□ 0.85
PHTF1-205ENST00000393357 NSD3Q9BZ95 1437 aa20.37■□□□□ 0.85
PHTF1-205ENST00000393357 PLCB2Q00722 1185 aa20.36■□□□□ 0.85
PHTF1-205ENST00000393357 CALD1Q05682 793 aaKnown RBP20.36■□□□□ 0.85
PHTF1-205ENST00000393357 DDX19BQ9UMR2 479 aa20.36■□□□□ 0.85
PHTF1-205ENST00000393357 PTMAP06454 111 aaKnown RBP20.36■□□□□ 0.85
PHTF1-205ENST00000393357 RIPK4P57078 832 aa20.36■□□□□ 0.85
PHTF1-205ENST00000393357 ZHX1Q9UKY1 873 aaPredicted RBP20.36■□□□□ 0.85
PHTF1-205ENST00000393357 ADGBQ8N7X0 1667 aa20.36■□□□□ 0.85
PHTF1-205ENST00000393357 DTNBO60941 627 aa20.35■□□□□ 0.85
PHTF1-205ENST00000393357 CHD1LQ86WJ1 897 aa20.35■□□□□ 0.85
PHTF1-205ENST00000393357 ZSCAN30Q86W11 494 aa20.34■□□□□ 0.85
PHTF1-205ENST00000393357 TBC1D9Q6ZT07 1266 aa20.33■□□□□ 0.85
PHTF1-205ENST00000393357 ATAD2Q6PL18 1390 aa20.33■□□□□ 0.85
PHTF1-205ENST00000393357 PIK3C2GO75747 1445 aa20.33■□□□□ 0.84
PHTF1-205ENST00000393357 K7ELQ4 463 aaPredicted RBP20.33■□□□□ 0.84
PHTF1-205ENST00000393357 ADCY10Q96PN6 1610 aa20.33■□□□□ 0.84
PHTF1-205ENST00000393357 UQCRHLA0A096LP55 91 aa20.32■□□□□ 0.84
PHTF1-205ENST00000393357 UQCRHP07919 91 aa20.32■□□□□ 0.84
PHTF1-205ENST00000393357 RAB3GAP1Q15042 981 aa20.32■□□□□ 0.84
PHTF1-205ENST00000393357 BAG4O95429 457 aaKnown RBP20.32■□□□□ 0.84
PHTF1-205ENST00000393357 C16orf71Q8IYS4 520 aaPredicted RBP20.32■□□□□ 0.84
PHTF1-205ENST00000393357 CCDC141Q6ZP82 1450 aa20.31■□□□□ 0.84
PHTF1-205ENST00000393357 HMOX1P09601 288 aa20.31■□□□□ 0.84
PHTF1-205ENST00000393357 PRIM1P49642 420 aaKnown RBP20.31■□□□□ 0.84
PHTF1-205ENST00000393357 PRDM15P57071 1507 aaPredicted RBP20.3■□□□□ 0.84
PHTF1-205ENST00000393357 ITSN2Q9NZM3 1697 aa20.3■□□□□ 0.84
PHTF1-205ENST00000393357 ZGPATQ8N5A5 531 aaKnown RBP20.3■□□□□ 0.84
PHTF1-205ENST00000393357 RBSNQ9H1K0 784 aa20.3■□□□□ 0.84
PHTF1-205ENST00000393357 SYCE3A1L190 88 aa20.3■□□□□ 0.84
PHTF1-205ENST00000393357 PLEKHG5O94827 1062 aa20.3■□□□□ 0.84
PHTF1-205ENST00000393357 WDR63Q8IWG1 891 aa20.3■□□□□ 0.84
PHTF1-205ENST00000393357 PDCL3Q9H2J4 239 aa20.3■□□□□ 0.84
PHTF1-205ENST00000393357 ARHGAP5Q13017 1502 aa20.3■□□□□ 0.84
PHTF1-205ENST00000393357 PTPRGP23470 1445 aa20.29■□□□□ 0.84
PHTF1-205ENST00000393357 CCDC173Q0VFZ6 552 aa20.29■□□□□ 0.84
PHTF1-205ENST00000393357 TPM2P07951 284 aa20.29■□□□□ 0.84
PHTF1-205ENST00000393357 SRPK2P78362 688 aaKnown RBP20.29■□□□□ 0.84
PHTF1-205ENST00000393357 ZNF830Q96NB3 372 aaPredicted RBP20.29■□□□□ 0.84
PHTF1-205ENST00000393357 SYCP2Q9BX26 1530 aa20.29■□□□□ 0.84
PHTF1-205ENST00000393357 TMPOP42166 694 aaKnown RBP20.27■□□□□ 0.84
PHTF1-205ENST00000393357 SKOR2Q2VWA4 1001 aaPredicted RBP20.27■□□□□ 0.83
PHTF1-205ENST00000393357 KIF2CQ99661 725 aa20.26■□□□□ 0.83
PHTF1-205ENST00000393357 GDPD2Q9HCC8 539 aa20.26■□□□□ 0.83
PHTF1-205ENST00000393357 SCAF11Q99590 1463 aaKnown RBP20.26■□□□□ 0.83
PHTF1-205ENST00000393357 ZSCAN23Q3MJ62 389 aa20.26■□□□□ 0.83
PHTF1-205ENST00000393357 SPAG9O60271 1321 aaKnown RBP20.25■□□□□ 0.83
PHTF1-205ENST00000393357 SMARCA5O60264 1052 aaPredicted RBP20.25■□□□□ 0.83
PHTF1-205ENST00000393357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.25■□□□□ 0.83
PHTF1-205ENST00000393357 SMC5Q8IY18 1101 aa20.25■□□□□ 0.83
PHTF1-205ENST00000393357 GGT6Q6P531 493 aa20.25■□□□□ 0.83
PHTF1-205ENST00000393357 OTUD7AQ8TE49 926 aaPredicted RBP20.25■□□□□ 0.83
PHTF1-205ENST00000393357 AK9Q5TCS8 1911 aa20.25■□□□□ 0.83
PHTF1-205ENST00000393357 ABCA8O94911 1581 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms