RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 SOS1Q07889 1333 aaPredicted RBP2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 ST20-MTHFSA0A0A6YYL1 179 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 IPO8O15397 1037 aaKnown RBP2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 TPM2P07951 284 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 CLCN1P35523 988 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 LMOD3Q0VAK6 560 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 HDAC1Q13547 482 aaPredicted RBP2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 DUSP27Q5VZP5 1158 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 CLEC17AQ6ZS10 378 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 P3H3Q8IVL6 736 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 DCAF11Q8TEB1 546 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 SNX21Q969T3 373 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 JPH4Q96JJ6 628 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 PHF23Q9BUL5 403 aaPredicted RBP2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 RWDD1Q9H446 243 aaPredicted RBP2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 DDX19BQ9UMR2 479 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 PPP6R1Q9UPN7 881 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 LRRC7Q96NW7 1537 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 NEO1Q92859 1461 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 CDK12Q9NYV4 1490 aaPredicted RBP2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 MLH3Q9UHC1 1453 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 PLEKHG2Q9H7P9 1386 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 MYOM1P52179 1685 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 ABCA6Q8N139 1617 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 GOLGA6L3A6NEY3 463 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 PHF14O94880 888 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 MCM2P49736 904 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 FAM193AP78312 1265 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 SLFN5Q08AF3 891 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 CCDC173Q0VFZ6 552 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 DHX8Q14562 1220 aaKnown RBP2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 NFKBIBQ15653 356 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 CSPP1Q1MSJ5 1256 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 ALDH1L2Q3SY69 923 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 C8orf34Q49A92 452 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 AMER1Q5JTC6 1135 aaPredicted RBP2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 CASC1Q6TDU7 716 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 CREBRFQ8IUR6 639 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 HSCBQ8IWL3 235 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 FAM184AQ8NB25 1140 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 ARHGAP45Q92619 1136 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 GCC1Q96CN9 775 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 TRIM44Q96DX7 344 aaPredicted RBP2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 BCL11BQ9C0K0 894 aaPredicted RBP2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 CHMP5Q9NZZ3 219 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 CHIC2Q9UKJ5 165 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 DLC1Q96QB1 1528 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 ATP7BP35670 1465 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 IFT172Q9UG01 1749 aa2.51□□□□□ -2.01
TRAJ49-201ENST00000390488 ARHGEF10O15013 1369 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 KIF1BO60333 1816 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 MBD3O95983 291 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 CANXP27824 592 aaKnown RBP2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 PPP2R1AP30153 589 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 RBM25P49756 843 aaKnown RBP2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 NUCB2P80303 420 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 HMGN5P82970 282 aaKnown RBP2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 BMP2KLQ5H9B9 411 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 TAF3Q5VWG9 929 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 ZKSCAN2Q63HK3 967 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 SYAP1Q96A49 352 aaPredicted RBP2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 RUNDC1Q96C34 613 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 TBC1D32Q96NH3 1257 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 CWC22Q9HCG8 908 aaKnown RBP2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 ABCC3O15438 1527 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 NLRP1Q9C000 1473 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 CLTCQ00610 1675 aaKnown RBP2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 SSH2Q76I76 1423 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 CAMSAP1Q5T5Y3 1602 aa2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 ZCCHC11Q5TAX3 1644 aaKnown RBP2.5□□□□□ -2.01
TRAJ49-201ENST00000390488 PIK3R4Q99570 1358 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 DISP3Q9P2K9 1392 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 ADGRB1O14514 1584 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 SPAG9O60271 1321 aaKnown RBP2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 EVC2Q86UK5 1308 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 ANKRD26Q9UPS8 1709 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 FSD2A1L4K1 749 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 CAVIN2O95810 425 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 TPM3P06753 285 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 NBR1Q14596 966 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 MVPQ14764 893 aaKnown RBP2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 TICAM2Q86XR7 235 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 SMC5Q8IY18 1101 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 FTSJ3Q8IY81 847 aaKnown RBP2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 CHMP4CQ96CF2 233 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 PANK3Q9H999 370 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 SLC52A1Q9NWF4 448 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 NOS1P29475 1434 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 PTCH1Q13635 1447 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 POGZQ7Z3K3 1410 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 PIK3C2BO00750 1634 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 RTL1A6NKG5 1358 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 AATKQ6ZMQ8 1374 aa2.49□□□□□ -2.01
TRAJ49-201ENST00000390488 LMTK3Q96Q04 1460 aa2.48□□□□□ -2.01
TRAJ49-201ENST00000390488 VGFO15240 615 aaPredicted RBP2.48□□□□□ -2.01
TRAJ49-201ENST00000390488 ST18O60284 1047 aa2.48□□□□□ -2.01
TRAJ49-201ENST00000390488 REC8O95072 547 aa2.48□□□□□ -2.01
TRAJ49-201ENST00000390488 LETM1O95202 739 aaPredicted RBP2.48□□□□□ -2.01
TRAJ49-201ENST00000390488 HSP90AA1P07900 732 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms