RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 ADGBQ8N7X0 1667 aa23.87■■□□□ 1.41
PPFIA1-202ENST00000389547 MYH16Q9H6N6 1097 aa23.86■■□□□ 1.41
PPFIA1-202ENST00000389547 CRBNQ96SW2 442 aa23.86■■□□□ 1.41
PPFIA1-202ENST00000389547 SCAF11Q99590 1463 aaKnown RBP23.86■■□□□ 1.41
PPFIA1-202ENST00000389547 FAM161AQ3B820 660 aa23.86■■□□□ 1.41
PPFIA1-202ENST00000389547 CLUAP1Q96AJ1 413 aa23.86■■□□□ 1.41
PPFIA1-202ENST00000389547 PDE3BQ13370 1112 aa23.86■■□□□ 1.41
PPFIA1-202ENST00000389547 NCLP19338 710 aaKnown RBP23.85■■□□□ 1.41
PPFIA1-202ENST00000389547 HMOX1P09601 288 aa23.85■■□□□ 1.41
PPFIA1-202ENST00000389547 ADCY10Q96PN6 1610 aa23.84■■□□□ 1.41
PPFIA1-202ENST00000389547 ELL2O00472 640 aaPredicted RBP23.83■■□□□ 1.4
PPFIA1-202ENST00000389547 DIAPH1O60610 1272 aaKnown RBP23.83■■□□□ 1.4
PPFIA1-202ENST00000389547 SKAP1Q86WV1 359 aa23.82■■□□□ 1.4
PPFIA1-202ENST00000389547 PPP6R1Q9UPN7 881 aa23.8■■□□□ 1.4
PPFIA1-202ENST00000389547 MSNP26038 577 aaKnown RBP23.8■■□□□ 1.4
PPFIA1-202ENST00000389547 NSD3Q9BZ95 1437 aa23.79■■□□□ 1.4
PPFIA1-202ENST00000389547 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
PPFIA1-202ENST00000389547 MAST1Q9Y2H9 1570 aa23.79■■□□□ 1.4
PPFIA1-202ENST00000389547 NEO1Q92859 1461 aa23.79■■□□□ 1.4
PPFIA1-202ENST00000389547 NPATQ14207 1427 aa23.79■■□□□ 1.4
PPFIA1-202ENST00000389547 RTF1Q92541 710 aaKnown RBP23.77■■□□□ 1.4
PPFIA1-202ENST00000389547 TSPOAP1O95153 1857 aa23.77■■□□□ 1.4
PPFIA1-202ENST00000389547 DNTTIP2Q5QJE6 756 aaKnown RBP23.77■■□□□ 1.4
PPFIA1-202ENST00000389547 ANKLE2Q86XL3 938 aa23.77■■□□□ 1.4
PPFIA1-202ENST00000389547 PLA2R1Q13018 1463 aa23.77■■□□□ 1.4
PPFIA1-202ENST00000389547 PSME1Q06323 249 aa23.76■■□□□ 1.39
PPFIA1-202ENST00000389547 NUDT16Q96DE0 195 aaKnown RBP23.76■■□□□ 1.39
PPFIA1-202ENST00000389547 ZMYM3Q14202 1370 aa23.76■■□□□ 1.39
PPFIA1-202ENST00000389547 TCP11L2Q8N4U5 519 aa23.76■■□□□ 1.39
PPFIA1-202ENST00000389547 NLRP6P59044 892 aa23.75■■□□□ 1.39
PPFIA1-202ENST00000389547 GOLGA6L22H0YM25 854 aa23.75■■□□□ 1.39
PPFIA1-202ENST00000389547 FBLN1P23142 703 aa23.75■■□□□ 1.39
PPFIA1-202ENST00000389547 TNRQ92752 1358 aa23.75■■□□□ 1.39
PPFIA1-202ENST00000389547 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
PPFIA1-202ENST00000389547 UHRF1BP1Q6BDS2 1440 aa23.74■■□□□ 1.39
PPFIA1-202ENST00000389547 UGGT1Q9NYU2 1555 aa23.74■■□□□ 1.39
PPFIA1-202ENST00000389547 AMOTL2Q9Y2J4 779 aa23.74■■□□□ 1.39
PPFIA1-202ENST00000389547 CCDC61Q9Y6R9 512 aa23.74■■□□□ 1.39
PPFIA1-202ENST00000389547 AMER1Q5JTC6 1135 aaPredicted RBP23.73■■□□□ 1.39
PPFIA1-202ENST00000389547 ATP10AO60312 1499 aa23.73■■□□□ 1.39
PPFIA1-202ENST00000389547 RIPK4P57078 832 aa23.73■■□□□ 1.39
PPFIA1-202ENST00000389547 RUNDC1Q96C34 613 aa23.73■■□□□ 1.39
PPFIA1-202ENST00000389547 CSB-PGBD3P0DP91 1061 aa23.72■■□□□ 1.39
PPFIA1-202ENST00000389547 SMC4Q9NTJ3 1288 aa23.72■■□□□ 1.39
PPFIA1-202ENST00000389547 RRS1Q15050 365 aaKnown RBP23.71■■□□□ 1.39
PPFIA1-202ENST00000389547 ESCO1Q5FWF5 840 aa23.71■■□□□ 1.39
PPFIA1-202ENST00000389547 PROSER2Q86WR7 435 aaPredicted RBP23.71■■□□□ 1.39
PPFIA1-202ENST00000389547 CENPQQ7L2Z9 268 aaPredicted RBP23.7■■□□□ 1.38
PPFIA1-202ENST00000389547 PTMAP06454 111 aaKnown RBP23.69■■□□□ 1.38
PPFIA1-202ENST00000389547 E9PSI1 815 aa23.69■■□□□ 1.38
PPFIA1-202ENST00000389547 ATAD2Q6PL18 1390 aa23.69■■□□□ 1.38
PPFIA1-202ENST00000389547 PER1O15534 1290 aaPredicted RBP23.68■■□□□ 1.38
PPFIA1-202ENST00000389547 SMG6Q86US8 1419 aaKnown RBP23.68■■□□□ 1.38
PPFIA1-202ENST00000389547 ZFYVE16Q7Z3T8 1539 aa23.68■■□□□ 1.38
PPFIA1-202ENST00000389547 SPATA31E1Q6ZUB1 1445 aa23.68■■□□□ 1.38
PPFIA1-202ENST00000389547 XPCQ01831 940 aaPredicted RBP23.67■■□□□ 1.38
PPFIA1-202ENST00000389547 RRP9O43818 475 aaKnown RBP23.67■■□□□ 1.38
PPFIA1-202ENST00000389547 ABTB2Q8N961 1025 aa23.67■■□□□ 1.38
PPFIA1-202ENST00000389547 NME9Q86XW9 330 aa23.66■■□□□ 1.38
PPFIA1-202ENST00000389547 CARD14Q9BXL6 1004 aa23.66■■□□□ 1.38
PPFIA1-202ENST00000389547 HSCBQ8IWL3 235 aa23.66■■□□□ 1.38
PPFIA1-202ENST00000389547 MLH3Q9UHC1 1453 aa23.66■■□□□ 1.38
PPFIA1-202ENST00000389547 WASLO00401 505 aaPredicted RBP23.66■■□□□ 1.38
PPFIA1-202ENST00000389547 HSP90AB1P08238 724 aaKnown RBP23.65■■□□□ 1.38
PPFIA1-202ENST00000389547 FAM13BQ9NYF5 915 aa23.65■■□□□ 1.38
PPFIA1-202ENST00000389547 RIMS2Q9UQ26 1411 aa23.64■■□□□ 1.38
PPFIA1-202ENST00000389547 NCKAP5LQ9HCH0 1330 aa23.64■■□□□ 1.38
PPFIA1-202ENST00000389547 PRKAR2BP31323 418 aa23.64■■□□□ 1.37
PPFIA1-202ENST00000389547 ITPRIPQ8IWB1 547 aa23.62■■□□□ 1.37
PPFIA1-202ENST00000389547 COG6Q9Y2V7 657 aa23.61■■□□□ 1.37
PPFIA1-202ENST00000389547 ATF3P18847 181 aa23.6■■□□□ 1.37
PPFIA1-202ENST00000389547 CALD1Q05682 793 aaKnown RBP23.59■■□□□ 1.37
PPFIA1-202ENST00000389547 ZNF692Q9BU19 519 aaPredicted RBP23.59■■□□□ 1.37
PPFIA1-202ENST00000389547 EMILIN1Q9Y6C2 1016 aa23.57■■□□□ 1.36
PPFIA1-202ENST00000389547 GPRASP1Q5JY77 1395 aa23.57■■□□□ 1.36
PPFIA1-202ENST00000389547 TSR2Q969E8 191 aaKnown RBP23.56■■□□□ 1.36
PPFIA1-202ENST00000389547 PRDM15P57071 1507 aaPredicted RBP23.56■■□□□ 1.36
PPFIA1-202ENST00000389547 MFAP1P55081 439 aaKnown RBP23.55■■□□□ 1.36
PPFIA1-202ENST00000389547 SULT6B1Q6IMI4 303 aa23.54■■□□□ 1.36
PPFIA1-202ENST00000389547 IPO8O15397 1037 aaKnown RBP23.54■■□□□ 1.36
PPFIA1-202ENST00000389547 CDK11BP21127 795 aaKnown RBP23.54■■□□□ 1.36
PPFIA1-202ENST00000389547 APBB1O00213 710 aa23.54■■□□□ 1.36
PPFIA1-202ENST00000389547 ZRANB1Q9UGI0 708 aa23.54■■□□□ 1.36
PPFIA1-202ENST00000389547 RBM10P98175 930 aaKnown RBP23.53■■□□□ 1.36
PPFIA1-202ENST00000389547 FYB1O15117 783 aa23.53■■□□□ 1.36
PPFIA1-202ENST00000389547 ABCA9Q8IUA7 1624 aa23.53■■□□□ 1.36
PPFIA1-202ENST00000389547 ARAP3Q8WWN8 1544 aa23.53■■□□□ 1.36
PPFIA1-202ENST00000389547 LMOD3Q0VAK6 560 aa23.52■■□□□ 1.36
PPFIA1-202ENST00000389547 PLXNC1O60486 1568 aa23.52■■□□□ 1.36
PPFIA1-202ENST00000389547 BCAR3O75815 825 aa23.52■■□□□ 1.36
PPFIA1-202ENST00000389547 GBP4Q96PP9 640 aa23.52■■□□□ 1.36
PPFIA1-202ENST00000389547 CROCC2H7BZ55 1655 aa23.52■■□□□ 1.36
PPFIA1-202ENST00000389547 FOXO3O43524 673 aa23.51■■□□□ 1.35
PPFIA1-202ENST00000389547 COL17A1Q9UMD9 1497 aaPredicted RBP23.51■■□□□ 1.35
PPFIA1-202ENST00000389547 HECW2Q9P2P5 1572 aa23.51■■□□□ 1.35
PPFIA1-202ENST00000389547 NECTIN2Q92692 538 aa23.51■■□□□ 1.35
PPFIA1-202ENST00000389547 FOXD4L1Q9NU39 408 aa23.51■■□□□ 1.35
PPFIA1-202ENST00000389547 PTPRTO14522 1441 aa23.51■■□□□ 1.35
PPFIA1-202ENST00000389547 LTKP29376 864 aa23.51■■□□□ 1.35
PPFIA1-202ENST00000389547 TPRNQ4KMQ1 711 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms