RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 NOS1P29475 1434 aa17.09■□□□□ 0.33
ABCA1-201ENST00000374733 BLMP54132 1417 aaPredicted RBP17.09■□□□□ 0.33
ABCA1-201ENST00000374733 LMTK2Q8IWU2 1503 aa17.07■□□□□ 0.32
ABCA1-201ENST00000374733 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
ABCA1-201ENST00000374733 PSDA5PKW4 1024 aaPredicted RBP17.07■□□□□ 0.32
ABCA1-201ENST00000374733 VASPP50552 380 aaPredicted RBP17.06■□□□□ 0.32
ABCA1-201ENST00000374733 TRPM2O94759 1503 aa17.05■□□□□ 0.32
ABCA1-201ENST00000374733 CROCC2H7BZ55 1655 aa17.04■□□□□ 0.32
ABCA1-201ENST00000374733 TMEM131LA2VDJ0 1609 aa17.04■□□□□ 0.32
ABCA1-201ENST00000374733 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
ABCA1-201ENST00000374733 YY1P25490 414 aa17.04■□□□□ 0.32
ABCA1-201ENST00000374733 FXR2P51116 673 aaKnown RBP eCLIP17.04■□□□□ 0.323e-8■□□□□ 9.5
ABCA1-201ENST00000374733 FNBP4Q8N3X1 1017 aaPredicted RBP17.04■□□□□ 0.32
ABCA1-201ENST00000374733 SLC52A1Q9NWF4 448 aa17.04■□□□□ 0.32
ABCA1-201ENST00000374733 PIK3R4Q99570 1358 aa17.03■□□□□ 0.32
ABCA1-201ENST00000374733 BRWD3Q6RI45 1802 aa17.03■□□□□ 0.32
ABCA1-201ENST00000374733 MIER1Q8N108 512 aa17.03■□□□□ 0.32
ABCA1-201ENST00000374733 PTCH1Q13635 1447 aa17.03■□□□□ 0.32
ABCA1-201ENST00000374733 PTPRUQ92729 1446 aa17.03■□□□□ 0.32
ABCA1-201ENST00000374733 HRCP23327 699 aa17.02■□□□□ 0.32
ABCA1-201ENST00000374733 HDGFP51858 240 aaKnown RBP17.02■□□□□ 0.32
ABCA1-201ENST00000374733 RRP7BPQ9NSQ0 103 aa17.02■□□□□ 0.32
ABCA1-201ENST00000374733 MARF1Q9Y4F3 1742 aaKnown RBP17.01■□□□□ 0.31
ABCA1-201ENST00000374733 SF3B2Q13435 895 aaKnown RBP17.01■□□□□ 0.31
ABCA1-201ENST00000374733 PLCD3Q8N3E9 789 aa17.01■□□□□ 0.31
ABCA1-201ENST00000374733 AMOTL2Q9Y2J4 779 aa17.01■□□□□ 0.31
ABCA1-201ENST00000374733 UNC13BO14795 1591 aa17.01■□□□□ 0.31
ABCA1-201ENST00000374733 XRN1Q8IZH2 1706 aaKnown RBP17.01■□□□□ 0.31
ABCA1-201ENST00000374733 BCL9LQ86UU0 1499 aa17■□□□□ 0.31
ABCA1-201ENST00000374733 NALCNQ8IZF0 1738 aa16.99■□□□□ 0.31
ABCA1-201ENST00000374733 LAMC1P11047 1609 aa16.98■□□□□ 0.31
ABCA1-201ENST00000374733 COL22A1Q8NFW1 1626 aaPredicted RBP16.98■□□□□ 0.31
ABCA1-201ENST00000374733 SPHKAPQ2M3C7 1700 aa16.98■□□□□ 0.31
ABCA1-201ENST00000374733 MYOM3Q5VTT5 1437 aa16.97■□□□□ 0.31
ABCA1-201ENST00000374733 PIP4P2Q8N4L2 257 aa16.97■□□□□ 0.31
ABCA1-201ENST00000374733 GJD4Q96KN9 370 aaPredicted RBP16.97■□□□□ 0.31
ABCA1-201ENST00000374733 GLI3P10071 1580 aa16.97■□□□□ 0.31
ABCA1-201ENST00000374733 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.31
ABCA1-201ENST00000374733 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.96■□□□□ 0.31
ABCA1-201ENST00000374733 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.96■□□□□ 0.3
ABCA1-201ENST00000374733 IFFO2Q5TF58 517 aa16.94■□□□□ 0.3
ABCA1-201ENST00000374733 CREBZFQ9NS37 354 aa16.94■□□□□ 0.3
ABCA1-201ENST00000374733 ADGRL3Q9HAR2 1447 aa16.94■□□□□ 0.3
ABCA1-201ENST00000374733 RPRD2Q5VT52 1461 aaKnown RBP16.93■□□□□ 0.3
ABCA1-201ENST00000374733 RALGAPBQ86X10 1494 aa16.93■□□□□ 0.3
ABCA1-201ENST00000374733 PRKAR2AP13861 404 aaKnown RBP16.92■□□□□ 0.3
ABCA1-201ENST00000374733 SOS2Q07890 1332 aaPredicted RBP16.92■□□□□ 0.3
ABCA1-201ENST00000374733 MYOM2P54296 1465 aa16.92■□□□□ 0.3
ABCA1-201ENST00000374733 C1orf167Q5SNV9 1468 aa16.92■□□□□ 0.3
ABCA1-201ENST00000374733 NRXN3Q9Y4C0 1643 aa16.92■□□□□ 0.3
ABCA1-201ENST00000374733 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
ABCA1-201ENST00000374733 ABCC5O15440 1437 aa16.9■□□□□ 0.3
ABCA1-201ENST00000374733 BAG6P46379 1132 aa16.87■□□□□ 0.29
ABCA1-201ENST00000374733 R3HDM1Q15032 1099 aaKnown RBP16.87■□□□□ 0.29
ABCA1-201ENST00000374733 ORAI2Q96SN7 254 aa16.86■□□□□ 0.29
ABCA1-201ENST00000374733 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
ABCA1-201ENST00000374733 SEPT12Q8IYM1 358 aa16.85■□□□□ 0.29
ABCA1-201ENST00000374733 DAPK1P53355 1430 aa16.85■□□□□ 0.29
ABCA1-201ENST00000374733 UNC5CLQ8IV45 518 aa16.83■□□□□ 0.28
ABCA1-201ENST00000374733 PTPN23Q9H3S7 1636 aa16.83■□□□□ 0.28
ABCA1-201ENST00000374733 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
ABCA1-201ENST00000374733 METP08581 1390 aa16.82■□□□□ 0.28
ABCA1-201ENST00000374733 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
ABCA1-201ENST00000374733 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
ABCA1-201ENST00000374733 CHIC2Q9UKJ5 165 aa16.82■□□□□ 0.28
ABCA1-201ENST00000374733 SLIT2O94813 1529 aa16.81■□□□□ 0.28
ABCA1-201ENST00000374733 KRT27Q7Z3Y8 459 aa16.81■□□□□ 0.28
ABCA1-201ENST00000374733 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
ABCA1-201ENST00000374733 EN1Q05925 392 aaPredicted RBP16.8■□□□□ 0.28
ABCA1-201ENST00000374733 E9PCH4 1651 aa16.8■□□□□ 0.28
ABCA1-201ENST00000374733 IFNLR1Q8IU57 520 aaPredicted RBP16.79■□□□□ 0.28
ABCA1-201ENST00000374733 PXDNQ92626 1479 aa16.78■□□□□ 0.28
ABCA1-201ENST00000374733 IQGAP3Q86VI3 1631 aa16.78■□□□□ 0.28
ABCA1-201ENST00000374733 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
ABCA1-201ENST00000374733 FARP1Q9Y4F1 1045 aaPredicted RBP16.77■□□□□ 0.28
ABCA1-201ENST00000374733 PLCH1Q4KWH8 1693 aa16.77■□□□□ 0.28
ABCA1-201ENST00000374733 USP32Q8NFA0 1604 aa16.77■□□□□ 0.27
ABCA1-201ENST00000374733 A0A0G2JS52 829 aa16.76■□□□□ 0.27
ABCA1-201ENST00000374733 MYT1Q01538 1121 aa16.76■□□□□ 0.27
ABCA1-201ENST00000374733 CCDC9Q9Y3X0 531 aaKnown RBP16.76■□□□□ 0.27
ABCA1-201ENST00000374733 TNS1Q9HBL0 1735 aaKnown RBP16.76■□□□□ 0.27
ABCA1-201ENST00000374733 MNX1P50219 401 aaPredicted RBP16.75■□□□□ 0.27
ABCA1-201ENST00000374733 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
ABCA1-201ENST00000374733 NPHP3Q7Z494 1330 aa16.74■□□□□ 0.27
ABCA1-201ENST00000374733 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
ABCA1-201ENST00000374733 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
ABCA1-201ENST00000374733 UTRNP46939 3433 aa16.73■□□□□ 0.27
ABCA1-201ENST00000374733 ADGRL2O95490 1459 aa16.72■□□□□ 0.27
ABCA1-201ENST00000374733 VPS72Q15906 364 aa16.71■□□□□ 0.27
ABCA1-201ENST00000374733 ESCO1Q5FWF5 840 aa16.7■□□□□ 0.26
ABCA1-201ENST00000374733 ANKRD50Q9ULJ7 1429 aa16.7■□□□□ 0.26
ABCA1-201ENST00000374733 FOXO3O43524 673 aa16.69■□□□□ 0.26
ABCA1-201ENST00000374733 EZH2Q15910 746 aaKnown RBP16.69■□□□□ 0.26
ABCA1-201ENST00000374733 POTEHQ6S545 545 aa16.69■□□□□ 0.26
ABCA1-201ENST00000374733 ZNF784Q8NCA9 323 aaPredicted RBP16.69■□□□□ 0.26
ABCA1-201ENST00000374733 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
ABCA1-201ENST00000374733 DISP2A7MBM2 1401 aa16.69■□□□□ 0.26
ABCA1-201ENST00000374733 ROBO2Q9HCK4 1378 aa16.68■□□□□ 0.26
ABCA1-201ENST00000374733 ONECUT3O60422 494 aaPredicted RBP16.68■□□□□ 0.26
ABCA1-201ENST00000374733 ADGRB2O60241 1585 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms