RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 RLBP1P12271 317 aa22.58■■□□□ 1.21
CHUK-201ENST00000370397 UBE2Q2Q8WVN8 375 aa22.58■■□□□ 1.21
CHUK-201ENST00000370397 COG6Q9Y2V7 657 aa22.58■■□□□ 1.21
CHUK-201ENST00000370397 CENPJQ9HC77 1338 aaPredicted RBP22.58■■□□□ 1.21
CHUK-201ENST00000370397 SETBP1Q9Y6X0 1596 aa22.58■■□□□ 1.21
CHUK-201ENST00000370397 KANK1Q14678 1352 aa22.57■■□□□ 1.2
CHUK-201ENST00000370397 RARSP54136 660 aaKnown RBP22.56■■□□□ 1.2
CHUK-201ENST00000370397 TNNQ9UQP3 1299 aa22.56■■□□□ 1.2
CHUK-201ENST00000370397 QRICH2Q9H0J4 1663 aa22.56■■□□□ 1.2
CHUK-201ENST00000370397 RRAGDQ9NQL2 400 aaPredicted RBP22.55■■□□□ 1.2
CHUK-201ENST00000370397 TBC1D2Q9BYX2 928 aa22.54■■□□□ 1.2
CHUK-201ENST00000370397 ZNF518AQ6AHZ1 1483 aa22.53■■□□□ 1.2
CHUK-201ENST00000370397 ABCA9Q8IUA7 1624 aa22.52■■□□□ 1.2
CHUK-201ENST00000370397 PPRC1Q5VV67 1664 aaKnown RBP22.52■■□□□ 1.2
CHUK-201ENST00000370397 FSD2A1L4K1 749 aa22.52■■□□□ 1.2
CHUK-201ENST00000370397 PPLO60437 1756 aa22.52■■□□□ 1.2
CHUK-201ENST00000370397 EFCAB6Q5THR3 1501 aa22.51■■□□□ 1.19
CHUK-201ENST00000370397 ADGRB1O14514 1584 aa22.51■■□□□ 1.19
CHUK-201ENST00000370397 AAMPQ13685 434 aa22.51■■□□□ 1.19
CHUK-201ENST00000370397 ATP7AQ04656 1500 aa22.5■■□□□ 1.19
CHUK-201ENST00000370397 ADGRF5Q8IZF2 1346 aa22.5■■□□□ 1.19
CHUK-201ENST00000370397 RSPH6AQ9H0K4 717 aa22.5■■□□□ 1.19
CHUK-201ENST00000370397 ADGRB3O60242 1522 aa22.5■■□□□ 1.19
CHUK-201ENST00000370397 SLKQ9H2G2 1235 aaPredicted RBP22.49■■□□□ 1.19
CHUK-201ENST00000370397 CFAP70Q5T0N1 1121 aa22.49■■□□□ 1.19
CHUK-201ENST00000370397 PDZRN3Q9UPQ7 1066 aa22.47■■□□□ 1.19
CHUK-201ENST00000370397 BECN1Q14457 450 aa22.47■■□□□ 1.19
CHUK-201ENST00000370397 PMFBP1Q8TBY8 1022 aa22.46■■□□□ 1.19
CHUK-201ENST00000370397 CCDC27Q2M243 656 aa22.45■■□□□ 1.19
CHUK-201ENST00000370397 NSD3Q9BZ95 1437 aa22.45■■□□□ 1.19
CHUK-201ENST00000370397 NCOA3Q9Y6Q9 1424 aa22.45■■□□□ 1.18
CHUK-201ENST00000370397 ADGRL1O94910 1474 aa22.44■■□□□ 1.18
CHUK-201ENST00000370397 EFCAB2Q5VUJ9 269 aa22.44■■□□□ 1.18
CHUK-201ENST00000370397 WDR63Q8IWG1 891 aa22.43■■□□□ 1.18
CHUK-201ENST00000370397 XRCC6P12956 609 aaKnown RBP eCLIP22.43■■□□□ 1.18
CHUK-201ENST00000370397 ZNF692Q9BU19 519 aaPredicted RBP22.43■■□□□ 1.18
CHUK-201ENST00000370397 RUNDC1Q96C34 613 aa22.43■■□□□ 1.18
CHUK-201ENST00000370397 NCBP3Q53F19 620 aaKnown RBP22.42■■□□□ 1.18
CHUK-201ENST00000370397 LMTK2Q8IWU2 1503 aa22.42■■□□□ 1.18
CHUK-201ENST00000370397 TCP11L2Q8N4U5 519 aa22.42■■□□□ 1.18
CHUK-201ENST00000370397 DDIT3P35638 169 aa22.41■■□□□ 1.18
CHUK-201ENST00000370397 AFAP1Q8N556 730 aa22.41■■□□□ 1.18
CHUK-201ENST00000370397 SPAG9O60271 1321 aaKnown RBP22.4■■□□□ 1.18
CHUK-201ENST00000370397 ARHGEF28Q8N1W1 1705 aaKnown RBP22.4■■□□□ 1.18
CHUK-201ENST00000370397 SLC24A1O60721 1099 aa22.4■■□□□ 1.18
CHUK-201ENST00000370397 KIDINS220Q9ULH0 1771 aa22.39■■□□□ 1.18
CHUK-201ENST00000370397 RRP7AQ9Y3A4 280 aaKnown RBP22.39■■□□□ 1.17
CHUK-201ENST00000370397 L1TD1Q5T7N2 865 aaKnown RBP22.38■■□□□ 1.17
CHUK-201ENST00000370397 FANCAO15360 1455 aa22.38■■□□□ 1.17
CHUK-201ENST00000370397 MCM4P33991 863 aa22.37■■□□□ 1.17
CHUK-201ENST00000370397 MVPQ14764 893 aaKnown RBP22.36■■□□□ 1.17
CHUK-201ENST00000370397 COL3A1P02461 1466 aaPredicted RBP22.36■■□□□ 1.17
CHUK-201ENST00000370397 TULP4Q9NRJ4 1543 aa22.36■■□□□ 1.17
CHUK-201ENST00000370397 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
CHUK-201ENST00000370397 BCL2L13Q9BXK5 485 aa22.35■■□□□ 1.17
CHUK-201ENST00000370397 PANK2Q9BZ23 570 aa22.35■■□□□ 1.17
CHUK-201ENST00000370397 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
CHUK-201ENST00000370397 ANKRD26Q9UPS8 1709 aa22.34■■□□□ 1.17
CHUK-201ENST00000370397 NOS1P29475 1434 aa22.33■■□□□ 1.17
CHUK-201ENST00000370397 GLI2P10070 1586 aa22.31■■□□□ 1.16
CHUK-201ENST00000370397 RWDD1Q9H446 243 aaPredicted RBP22.31■■□□□ 1.16
CHUK-201ENST00000370397 SLC12A5Q9H2X9 1139 aa22.31■■□□□ 1.16
CHUK-201ENST00000370397 HDAC1Q13547 482 aaPredicted RBP22.31■■□□□ 1.16
CHUK-201ENST00000370397 NEUROD2Q15784 382 aa22.3■■□□□ 1.16
CHUK-201ENST00000370397 EIF5BO60841 1220 aaKnown RBP22.3■■□□□ 1.16
CHUK-201ENST00000370397 CFAP74Q9C0B2 1584 aa22.28■■□□□ 1.16
CHUK-201ENST00000370397 CLCN1P35523 988 aa22.28■■□□□ 1.16
CHUK-201ENST00000370397 MTHFSP49914 203 aa22.28■■□□□ 1.16
CHUK-201ENST00000370397 MORC1Q86VD1 984 aa22.28■■□□□ 1.16
CHUK-201ENST00000370397 C22orf23Q9BZE7 217 aa22.28■■□□□ 1.16
CHUK-201ENST00000370397 PIK3C2BO00750 1634 aa22.28■■□□□ 1.16
CHUK-201ENST00000370397 UPF2Q9HAU5 1272 aaKnown RBP22.28■■□□□ 1.16
CHUK-201ENST00000370397 SIGLEC1Q9BZZ2 1709 aa22.28■■□□□ 1.16
CHUK-201ENST00000370397 PLEKHF1Q96S99 279 aa22.27■■□□□ 1.16
CHUK-201ENST00000370397 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
CHUK-201ENST00000370397 SMC5Q8IY18 1101 aa22.26■■□□□ 1.15
CHUK-201ENST00000370397 GOLGA6L3A6NEY3 463 aa22.26■■□□□ 1.15
CHUK-201ENST00000370397 CHMP5Q9NZZ3 219 aa22.25■■□□□ 1.15
CHUK-201ENST00000370397 CAMSAP1Q5T5Y3 1602 aa22.25■■□□□ 1.15
CHUK-201ENST00000370397 TRIM27P14373 513 aa22.25■■□□□ 1.15
CHUK-201ENST00000370397 FRMPD1Q5SYB0 1578 aa22.25■■□□□ 1.15
CHUK-201ENST00000370397 C14orf93Q9H972 538 aaKnown RBP22.25■■□□□ 1.15
CHUK-201ENST00000370397 TRAK2O60296 914 aa22.24■■□□□ 1.15
CHUK-201ENST00000370397 CT47B1P0C2W7 299 aaPredicted RBP22.24■■□□□ 1.15
CHUK-201ENST00000370397 RBM25P49756 843 aaKnown RBP22.24■■□□□ 1.15
CHUK-201ENST00000370397 TNNT2P45379 298 aaPredicted RBP22.23■■□□□ 1.15
CHUK-201ENST00000370397 ZKSCAN2Q63HK3 967 aa22.23■■□□□ 1.15
CHUK-201ENST00000370397 DZIP1LQ8IYY4 767 aaKnown RBP22.23■■□□□ 1.15
CHUK-201ENST00000370397 NSD2O96028 1365 aa22.23■■□□□ 1.15
CHUK-201ENST00000370397 SPRYD3Q8NCJ5 442 aa22.23■■□□□ 1.15
CHUK-201ENST00000370397 TRIM35Q9UPQ4 493 aa22.23■■□□□ 1.15
CHUK-201ENST00000370397 ANKRD36BQ8N2N9 1353 aa22.22■■□□□ 1.15
CHUK-201ENST00000370397 MED14O60244 1454 aa22.22■■□□□ 1.15
CHUK-201ENST00000370397 KIF3BO15066 747 aa22.22■■□□□ 1.15
CHUK-201ENST00000370397 MYH16Q9H6N6 1097 aa22.22■■□□□ 1.15
CHUK-201ENST00000370397 CFAP65Q6ZU64 1925 aaKnown RBP22.21■■□□□ 1.15
CHUK-201ENST00000370397 ERBB4Q15303 1308 aa22.21■■□□□ 1.15
CHUK-201ENST00000370397 HECW2Q9P2P5 1572 aa22.21■■□□□ 1.15
CHUK-201ENST00000370397 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
CHUK-201ENST00000370397 KIF2CQ99661 725 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms