RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 ADGRB2O60241 1585 aa15.2■□□□□ 0.02
VANGL1-203ENST00000369509 KTN1Q86UP2 1357 aaKnown RBP15.2■□□□□ 0.02
VANGL1-203ENST00000369509 SAFB2Q14151 953 aaKnown RBP eCLIP15.2■□□□□ 0.02
VANGL1-203ENST00000369509 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.19■□□□□ 0.02
VANGL1-203ENST00000369509 USP32Q8NFA0 1604 aa15.19■□□□□ 0.02
VANGL1-203ENST00000369509 PARD3Q8TEW0 1356 aa15.19■□□□□ 0.02
VANGL1-203ENST00000369509 SIRT1Q96EB6 747 aa15.19■□□□□ 0.02
VANGL1-203ENST00000369509 CHD2O14647 1828 aaKnown RBP15.19■□□□□ 0.02
VANGL1-203ENST00000369509 POGKQ9P215 609 aa15.18■□□□□ 0.02
VANGL1-203ENST00000369509 TBX22Q9Y458 520 aa15.18■□□□□ 0.02
VANGL1-203ENST00000369509 ROBO2Q9HCK4 1378 aa15.18■□□□□ 0.02
VANGL1-203ENST00000369509 BCANQ96GW7 911 aa15.18■□□□□ 0.02
VANGL1-203ENST00000369509 MINK1Q8N4C8 1332 aaPredicted RBP15.17■□□□□ 0.02
VANGL1-203ENST00000369509 WAPLQ7Z5K2 1190 aa15.17■□□□□ 0.02
VANGL1-203ENST00000369509 SLC26A8Q96RN1 970 aa15.17■□□□□ 0.02
VANGL1-203ENST00000369509 PTCH1Q13635 1447 aa15.17■□□□□ 0.02
VANGL1-203ENST00000369509 CCDC184Q52MB2 194 aa15.16■□□□□ 0.02
VANGL1-203ENST00000369509 NPC1L1Q9UHC9 1359 aa15.15■□□□□ 0.02
VANGL1-203ENST00000369509 PIK3R4Q99570 1358 aa15.14■□□□□ 0.01
VANGL1-203ENST00000369509 NINLQ9Y2I6 1382 aa15.14■□□□□ 0.01
VANGL1-203ENST00000369509 RALBP1Q15311 655 aa15.14■□□□□ 0.01
VANGL1-203ENST00000369509 AMER1Q5JTC6 1135 aaPredicted RBP15.14■□□□□ 0.01
VANGL1-203ENST00000369509 ANKLE2Q86XL3 938 aa15.14■□□□□ 0.01
VANGL1-203ENST00000369509 CABP2Q9NPB3 220 aa15.14■□□□□ 0.01
VANGL1-203ENST00000369509 ATAD2Q6PL18 1390 aa15.14■□□□□ 0.01
VANGL1-203ENST00000369509 CARD14Q9BXL6 1004 aa15.13■□□□□ 0.01
VANGL1-203ENST00000369509 CD163L1Q9NR16 1453 aa15.13■□□□□ 0.01
VANGL1-203ENST00000369509 TOPAZ1Q8N9V7 1692 aa15.13■□□□□ 0.01
VANGL1-203ENST00000369509 KDM4FA0A1W2PPD8 638 aa15.12■□□□□ 0.01
VANGL1-203ENST00000369509 SLC12A5Q9H2X9 1139 aa15.12■□□□□ 0.01
VANGL1-203ENST00000369509 ANKRD36BQ8N2N9 1353 aa15.12■□□□□ 0.01
VANGL1-203ENST00000369509 MYBBP1AQ9BQG0 1328 aaKnown RBP15.12■□□□□ 0.01
VANGL1-203ENST00000369509 KNSTRNQ9Y448 316 aa15.12■□□□□ 0.01
VANGL1-203ENST00000369509 NPHP4O75161 1426 aaPredicted RBP15.11■□□□□ 0.01
VANGL1-203ENST00000369509 CNGB1Q14028 1251 aaPredicted RBP15.11■□□□□ 0.01
VANGL1-203ENST00000369509 CDK19Q9BWU1 502 aa15.11■□□□□ 0.01
VANGL1-203ENST00000369509 SRPK2P78362 688 aaKnown RBP15.1■□□□□ 0.01
VANGL1-203ENST00000369509 NSD3Q9BZ95 1437 aa15.1■□□□□ 0.01
VANGL1-203ENST00000369509 AMOTL2Q9Y2J4 779 aa15.1■□□□□ 0.01
VANGL1-203ENST00000369509 NWD1Q149M9 1564 aa15.1■□□□□ 0.01
VANGL1-203ENST00000369509 ANKRD26Q9UPS8 1709 aa15.1■□□□□ 0.01
VANGL1-203ENST00000369509 ATP7BP35670 1465 aa15.1■□□□□ 0.01
VANGL1-203ENST00000369509 CC2D1BQ5T0F9 858 aaKnown RBP15.09■□□□□ 0.01
VANGL1-203ENST00000369509 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
VANGL1-203ENST00000369509 MRS2Q9HD23 443 aa15.09■□□□□ 0.01
VANGL1-203ENST00000369509 AKAP12Q02952 1782 aa15.09■□□□□ 0.01
VANGL1-203ENST00000369509 A0A1W2PP64 1363 aa15.09■□□□□ 0.01
VANGL1-203ENST00000369509 BRD4O60885 1362 aaPredicted RBP15.09■□□□□ 0.01
VANGL1-203ENST00000369509 WASLO00401 505 aaPredicted RBP15.08■□□□□ 0.01
VANGL1-203ENST00000369509 NALCNQ8IZF0 1738 aa15.08■□□□□ 0.01
VANGL1-203ENST00000369509 ITSN1Q15811 1721 aa15.08■□□□□ 0
VANGL1-203ENST00000369509 MON2Q7Z3U7 1717 aa15.08■□□□□ 0
VANGL1-203ENST00000369509 KIF20BQ96Q89 1820 aa15.08■□□□□ 0
VANGL1-203ENST00000369509 LMTK3Q96Q04 1460 aa15.06■□□□□ 0
VANGL1-203ENST00000369509 CDC42BPGQ6DT37 1551 aa15.06■□□□□ 0
VANGL1-203ENST00000369509 FMN2Q9NZ56 1722 aa15.06■□□□□ 0
VANGL1-203ENST00000369509 RGPD8O14715 1765 aaPredicted RBP15.06■□□□□ 0
VANGL1-203ENST00000369509 NLRP13Q86W25 1043 aa15.05■□□□□ 0
VANGL1-203ENST00000369509 KCNA6P17658 529 aa15.05■□□□□ -0
VANGL1-203ENST00000369509 NCKAP5LQ9HCH0 1330 aa15.04■□□□□ -0
VANGL1-203ENST00000369509 STRCQ7RTU9 1775 aa15.04■□□□□ -0
VANGL1-203ENST00000369509 PPIP5K1Q6PFW1 1433 aa15.04■□□□□ -0
VANGL1-203ENST00000369509 CPSF1Q10570 1443 aaKnown RBP15.03■□□□□ -0
VANGL1-203ENST00000369509 PRR36Q9H6K5 1346 aa15.03■□□□□ -0
VANGL1-203ENST00000369509 NRKQ7Z2Y5 1582 aa15.03■□□□□ -0
VANGL1-203ENST00000369509 STRCP1A6NGW2 1772 aa15.02□□□□□ -0.01
VANGL1-203ENST00000369509 NSD2O96028 1365 aa15.02□□□□□ -0.01
VANGL1-203ENST00000369509 CABP1Q9NZU7 370 aa15.02□□□□□ -0.01
VANGL1-203ENST00000369509 PNISRQ8TF01 805 aaKnown RBP15.01□□□□□ -0.01
VANGL1-203ENST00000369509 NUDT16Q96DE0 195 aaKnown RBP15.01□□□□□ -0.01
VANGL1-203ENST00000369509 CGNL1Q0VF96 1302 aa15.01□□□□□ -0.01
VANGL1-203ENST00000369509 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
VANGL1-203ENST00000369509 TERF2IPQ9NYB0 399 aa15.01□□□□□ -0.01
VANGL1-203ENST00000369509 NKTRP30414 1462 aaKnown RBP15□□□□□ -0.01
VANGL1-203ENST00000369509 SUPT16HQ9Y5B9 1047 aaKnown RBP14.99□□□□□ -0.01
VANGL1-203ENST00000369509 FAM9BQ8IZU0 186 aa14.99□□□□□ -0.01
VANGL1-203ENST00000369509 CCDC61Q9Y6R9 512 aa14.99□□□□□ -0.01
VANGL1-203ENST00000369509 HDGFL2Q7Z4V5 671 aaPredicted RBP14.97□□□□□ -0.01
VANGL1-203ENST00000369509 EDC4Q6P2E9 1401 aaKnown RBP14.97□□□□□ -0.01
VANGL1-203ENST00000369509 ANKARQ7Z5J8 1434 aa14.97□□□□□ -0.01
VANGL1-203ENST00000369509 ADGRL3Q9HAR2 1447 aa14.97□□□□□ -0.01
VANGL1-203ENST00000369509 SHPRHQ149N8 1683 aa14.96□□□□□ -0.01
VANGL1-203ENST00000369509 HSPA2P54652 639 aa14.96□□□□□ -0.01
VANGL1-203ENST00000369509 PLEKHG3A1L390 1219 aa14.94□□□□□ -0.02
VANGL1-203ENST00000369509 HNRNPUQ00839 825 aaKnown RBP eCLIP14.94□□□□□ -0.02
VANGL1-203ENST00000369509 INSRP06213 1382 aa14.93□□□□□ -0.02
VANGL1-203ENST00000369509 FYB1O15117 783 aa14.93□□□□□ -0.02
VANGL1-203ENST00000369509 MORC1Q86VD1 984 aa14.93□□□□□ -0.02
VANGL1-203ENST00000369509 XIRP1Q702N8 1843 aaKnown RBP14.93□□□□□ -0.02
VANGL1-203ENST00000369509 POLR3AO14802 1390 aaPredicted RBP14.92□□□□□ -0.02
VANGL1-203ENST00000369509 USP6P35125 1406 aa14.92□□□□□ -0.02
VANGL1-203ENST00000369509 BLMP54132 1417 aaPredicted RBP14.92□□□□□ -0.02
VANGL1-203ENST00000369509 SSH2Q76I76 1423 aa14.91□□□□□ -0.02
VANGL1-203ENST00000369509 NUTM2FA1L443 756 aa14.91□□□□□ -0.02
VANGL1-203ENST00000369509 GGNBP2Q9H3C7 697 aa14.91□□□□□ -0.02
VANGL1-203ENST00000369509 MAP2P11137 1827 aaKnown RBP14.9□□□□□ -0.02
VANGL1-203ENST00000369509 ACEP12821 1306 aa14.9□□□□□ -0.02
VANGL1-203ENST00000369509 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
VANGL1-203ENST00000369509 USP54Q70EL1 1684 aa14.89□□□□□ -0.03
VANGL1-203ENST00000369509 RBM33Q96EV2 1170 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms