RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 DUOX2Q9NRD8 1548 aa13.47□□□□□ -0.25
LYSMD1-201ENST00000368908 KNSTRNQ9Y448 316 aa13.47□□□□□ -0.25
LYSMD1-201ENST00000368908 IGHDP01880 384 aa13.47□□□□□ -0.25
LYSMD1-201ENST00000368908 GOLGA6L3A6NEY3 463 aa13.46□□□□□ -0.26
LYSMD1-201ENST00000368908 CLUAP1Q96AJ1 413 aa13.46□□□□□ -0.26
LYSMD1-201ENST00000368908 TBC1D32Q96NH3 1257 aa13.46□□□□□ -0.26
LYSMD1-201ENST00000368908 UPF2Q9HAU5 1272 aaKnown RBP13.46□□□□□ -0.26
LYSMD1-201ENST00000368908 CDCA8Q53HL2 280 aa13.45□□□□□ -0.26
LYSMD1-201ENST00000368908 ADAMTSL3P82987 1691 aa13.45□□□□□ -0.26
LYSMD1-201ENST00000368908 SPHKAPQ2M3C7 1700 aa13.45□□□□□ -0.26
LYSMD1-201ENST00000368908 KDM5AP29375 1690 aaKnown RBP13.44□□□□□ -0.26
LYSMD1-201ENST00000368908 SEC24BO95487 1268 aa13.44□□□□□ -0.26
LYSMD1-201ENST00000368908 XRCC6P12956 609 aaKnown RBP eCLIP13.44□□□□□ -0.26
LYSMD1-201ENST00000368908 SLKQ9H2G2 1235 aaPredicted RBP13.44□□□□□ -0.26
LYSMD1-201ENST00000368908 PNNQ9H307 717 aaKnown RBP13.44□□□□□ -0.26
LYSMD1-201ENST00000368908 RRP9O43818 475 aaKnown RBP13.43□□□□□ -0.26
LYSMD1-201ENST00000368908 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
LYSMD1-201ENST00000368908 PKNOX2Q96KN3 472 aa13.43□□□□□ -0.26
LYSMD1-201ENST00000368908 ISY1Q9ULR0 285 aaKnown RBP13.43□□□□□ -0.26
LYSMD1-201ENST00000368908 BCAR3O75815 825 aa13.42□□□□□ -0.26
LYSMD1-201ENST00000368908 KIAA1210Q9ULL0 1709 aa13.42□□□□□ -0.26
LYSMD1-201ENST00000368908 MCM4P33991 863 aa13.41□□□□□ -0.26
LYSMD1-201ENST00000368908 RGL3Q3MIN7 710 aa13.41□□□□□ -0.26
LYSMD1-201ENST00000368908 TBC1D2Q9BYX2 928 aa13.41□□□□□ -0.26
LYSMD1-201ENST00000368908 CEP152O94986 1710 aa13.41□□□□□ -0.26
LYSMD1-201ENST00000368908 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
LYSMD1-201ENST00000368908 CENPJQ9HC77 1338 aaPredicted RBP13.41□□□□□ -0.26
LYSMD1-201ENST00000368908 SCAF11Q99590 1463 aaKnown RBP13.41□□□□□ -0.26
LYSMD1-201ENST00000368908 MRE11P49959 708 aa13.4□□□□□ -0.26
LYSMD1-201ENST00000368908 FER1L4A9Z1Z3 1794 aa13.4□□□□□ -0.27
LYSMD1-201ENST00000368908 APAF1O14727 1248 aa13.39□□□□□ -0.27
LYSMD1-201ENST00000368908 NAP1L5Q96NT1 182 aaPredicted RBP13.39□□□□□ -0.27
LYSMD1-201ENST00000368908 DEPDC5O75140 1603 aa13.39□□□□□ -0.27
LYSMD1-201ENST00000368908 HSP90AA1P07900 732 aaKnown RBP13.38□□□□□ -0.27
LYSMD1-201ENST00000368908 CHMP5Q9NZZ3 219 aa13.38□□□□□ -0.27
LYSMD1-201ENST00000368908 PPP6R1Q9UPN7 881 aa13.38□□□□□ -0.27
LYSMD1-201ENST00000368908 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
LYSMD1-201ENST00000368908 MROH2AA6NES4 1674 aa13.38□□□□□ -0.27
LYSMD1-201ENST00000368908 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
LYSMD1-201ENST00000368908 SHPRHQ149N8 1683 aa13.36□□□□□ -0.27
LYSMD1-201ENST00000368908 HSP90AA2PQ14568 343 aaPredicted RBP13.36□□□□□ -0.27
LYSMD1-201ENST00000368908 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
LYSMD1-201ENST00000368908 MROH1Q8NDA8 1641 aa13.35□□□□□ -0.27
LYSMD1-201ENST00000368908 DDX11L8A8MPP1 907 aa13.35□□□□□ -0.27
LYSMD1-201ENST00000368908 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
LYSMD1-201ENST00000368908 COG6Q9Y2V7 657 aa13.35□□□□□ -0.27
LYSMD1-201ENST00000368908 NCOA3Q9Y6Q9 1424 aa13.35□□□□□ -0.27
LYSMD1-201ENST00000368908 RIMS1Q86UR5 1692 aaKnown RBP13.35□□□□□ -0.27
LYSMD1-201ENST00000368908 PANK1Q8TE04 598 aa13.35□□□□□ -0.27
LYSMD1-201ENST00000368908 TRPM2O94759 1503 aa13.35□□□□□ -0.27
LYSMD1-201ENST00000368908 POLR3AO14802 1390 aaPredicted RBP13.35□□□□□ -0.27
LYSMD1-201ENST00000368908 IQSEC2Q5JU85 1478 aa13.35□□□□□ -0.27
LYSMD1-201ENST00000368908 TRAK2O60296 914 aa13.34□□□□□ -0.27
LYSMD1-201ENST00000368908 PANK2Q9BZ23 570 aa13.34□□□□□ -0.27
LYSMD1-201ENST00000368908 NEURL4Q96JN8 1562 aa13.34□□□□□ -0.27
LYSMD1-201ENST00000368908 PDZRN3Q9UPQ7 1066 aa13.34□□□□□ -0.27
LYSMD1-201ENST00000368908 KDM4FA0A1W2PPD8 638 aa13.33□□□□□ -0.28
LYSMD1-201ENST00000368908 RWDD1Q9H446 243 aaPredicted RBP13.33□□□□□ -0.28
LYSMD1-201ENST00000368908 VWDEQ8N2E2 1590 aa13.32□□□□□ -0.28
LYSMD1-201ENST00000368908 KANK1Q14678 1352 aa13.32□□□□□ -0.28
LYSMD1-201ENST00000368908 KIF3BO15066 747 aa13.32□□□□□ -0.28
LYSMD1-201ENST00000368908 GRPEL1Q9HAV7 217 aa13.32□□□□□ -0.28
LYSMD1-201ENST00000368908 DMRT2Q9Y5R5 561 aa13.32□□□□□ -0.28
LYSMD1-201ENST00000368908 CLTCQ00610 1675 aaKnown RBP13.32□□□□□ -0.28
LYSMD1-201ENST00000368908 WWC1Q8IX03 1113 aa13.32□□□□□ -0.28
LYSMD1-201ENST00000368908 ESPNB1AK53 854 aa13.31□□□□□ -0.28
LYSMD1-201ENST00000368908 RARSP54136 660 aaKnown RBP13.31□□□□□ -0.28
LYSMD1-201ENST00000368908 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
LYSMD1-201ENST00000368908 PCDHB15Q9Y5E8 787 aa13.31□□□□□ -0.28
LYSMD1-201ENST00000368908 LMTK2Q8IWU2 1503 aa13.31□□□□□ -0.28
LYSMD1-201ENST00000368908 TPM2P07951 284 aa13.31□□□□□ -0.28
LYSMD1-201ENST00000368908 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
LYSMD1-201ENST00000368908 ABCC3O15438 1527 aa13.3□□□□□ -0.28
LYSMD1-201ENST00000368908 PTMSP20962 102 aa13.3□□□□□ -0.28
LYSMD1-201ENST00000368908 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
LYSMD1-201ENST00000368908 PTPRMP28827 1452 aa13.3□□□□□ -0.28
LYSMD1-201ENST00000368908 MLECQ14165 292 aa13.3□□□□□ -0.28
LYSMD1-201ENST00000368908 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
LYSMD1-201ENST00000368908 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
LYSMD1-201ENST00000368908 C22orf23Q9BZE7 217 aa13.29□□□□□ -0.28
LYSMD1-201ENST00000368908 ZMYND15Q9H091 742 aa13.29□□□□□ -0.28
LYSMD1-201ENST00000368908 C3P01024 1663 aa13.29□□□□□ -0.28
LYSMD1-201ENST00000368908 ERVK-7P63135 1459 aa13.29□□□□□ -0.28
LYSMD1-201ENST00000368908 DDIT3P35638 169 aa13.29□□□□□ -0.28
LYSMD1-201ENST00000368908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.28
LYSMD1-201ENST00000368908 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
LYSMD1-201ENST00000368908 USP32Q8NFA0 1604 aa13.28□□□□□ -0.28
LYSMD1-201ENST00000368908 WDR63Q8IWG1 891 aa13.28□□□□□ -0.28
LYSMD1-201ENST00000368908 GZF1Q9H116 711 aaPredicted RBP13.28□□□□□ -0.28
LYSMD1-201ENST00000368908 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
LYSMD1-201ENST00000368908 CAMSAP1Q5T5Y3 1602 aa13.28□□□□□ -0.28
LYSMD1-201ENST00000368908 GGT6Q6P531 493 aa13.28□□□□□ -0.28
LYSMD1-201ENST00000368908 ESF1Q9H501 851 aaKnown RBP13.28□□□□□ -0.28
LYSMD1-201ENST00000368908 PTPRTO14522 1441 aa13.27□□□□□ -0.28
LYSMD1-201ENST00000368908 HSCBQ8IWL3 235 aa13.27□□□□□ -0.29
LYSMD1-201ENST00000368908 SNX21Q969T3 373 aa13.27□□□□□ -0.29
LYSMD1-201ENST00000368908 RLBP1P12271 317 aa13.26□□□□□ -0.29
LYSMD1-201ENST00000368908 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
LYSMD1-201ENST00000368908 SKOR2Q2VWA4 1001 aaPredicted RBP13.26□□□□□ -0.29
LYSMD1-201ENST00000368908 TET3O43151 1660 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms