RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 RABEP1Q15276 862 aa16.23■□□□□ 0.19
GOPC-202ENST00000368498 TAF7LQ5H9L4 462 aa16.23■□□□□ 0.19
GOPC-202ENST00000368498 SDF4Q9BRK5 362 aa16.23■□□□□ 0.19
GOPC-202ENST00000368498 RUFY2Q8WXA3 655 aa16.23■□□□□ 0.19
GOPC-202ENST00000368498 IGF1RP08069 1367 aa16.22■□□□□ 0.19
GOPC-202ENST00000368498 AAMPQ13685 434 aa16.22■□□□□ 0.19
GOPC-202ENST00000368498 ARGLU1Q9NWB6 273 aaPredicted RBP16.22■□□□□ 0.19
GOPC-202ENST00000368498 WASHC2CQ9Y4E1 1318 aa16.22■□□□□ 0.19
GOPC-202ENST00000368498 CCDC66A2RUB6 948 aa16.21■□□□□ 0.19
GOPC-202ENST00000368498 SETQ01105 290 aaPredicted RBP16.21■□□□□ 0.19
GOPC-202ENST00000368498 CEBPZQ03701 1054 aaKnown RBP16.21■□□□□ 0.19
GOPC-202ENST00000368498 CCDC73Q6ZRK6 1079 aa16.21■□□□□ 0.19
GOPC-202ENST00000368498 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
GOPC-202ENST00000368498 ERICH4A6NGS2 130 aa16.21■□□□□ 0.18
GOPC-202ENST00000368498 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.18
GOPC-202ENST00000368498 TMEM132EQ6IEE7 984 aa16.21■□□□□ 0.18
GOPC-202ENST00000368498 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.18
GOPC-202ENST00000368498 EVC2Q86UK5 1308 aa16.21■□□□□ 0.18
GOPC-202ENST00000368498 HDAC5Q9UQL6 1122 aa16.2■□□□□ 0.18
GOPC-202ENST00000368498 MYOM3Q5VTT5 1437 aa16.2■□□□□ 0.18
GOPC-202ENST00000368498 RSPH4AQ5TD94 716 aa16.2■□□□□ 0.18
GOPC-202ENST00000368498 PDCL3Q9H2J4 239 aa16.19■□□□□ 0.18
GOPC-202ENST00000368498 TSR1Q2NL82 804 aaKnown RBP16.19■□□□□ 0.18
GOPC-202ENST00000368498 TTLL5Q6EMB2 1281 aa16.19■□□□□ 0.18
GOPC-202ENST00000368498 CPLX1O14810 134 aa16.18■□□□□ 0.18
GOPC-202ENST00000368498 CSB-PGBD3P0DP91 1061 aa16.18■□□□□ 0.18
GOPC-202ENST00000368498 CARMIL2Q6F5E8 1435 aa16.18■□□□□ 0.18
GOPC-202ENST00000368498 XRCC6P12956 609 aaKnown RBP eCLIP16.18■□□□□ 0.18
GOPC-202ENST00000368498 COG3Q96JB2 828 aa16.18■□□□□ 0.18
GOPC-202ENST00000368498 GNAI1P63096 354 aa16.17■□□□□ 0.18
GOPC-202ENST00000368498 MVPQ14764 893 aaKnown RBP16.17■□□□□ 0.18
GOPC-202ENST00000368498 PDILTQ8N807 584 aa16.17■□□□□ 0.18
GOPC-202ENST00000368498 CCDC112Q8NEF3 446 aa16.17■□□□□ 0.18
GOPC-202ENST00000368498 JPH4Q96JJ6 628 aa16.17■□□□□ 0.18
GOPC-202ENST00000368498 CFAP70Q5T0N1 1121 aa16.17■□□□□ 0.18
GOPC-202ENST00000368498 TRERF1Q96PN7 1200 aa16.17■□□□□ 0.18
GOPC-202ENST00000368498 HSP90B2PQ58FF3 399 aa16.17■□□□□ 0.18
GOPC-202ENST00000368498 PDCL2Q8N4E4 241 aa16.17■□□□□ 0.18
GOPC-202ENST00000368498 SLC12A5Q9H2X9 1139 aa16.17■□□□□ 0.18
GOPC-202ENST00000368498 KDM4AO75164 1064 aa16.16■□□□□ 0.18
GOPC-202ENST00000368498 TPM1P09493 284 aa16.16■□□□□ 0.18
GOPC-202ENST00000368498 SSFA2P28290 1259 aa16.16■□□□□ 0.18
GOPC-202ENST00000368498 TNPO1Q92973 898 aaKnown RBP16.16■□□□□ 0.18
GOPC-202ENST00000368498 CABP2Q9NPB3 220 aa16.16■□□□□ 0.18
GOPC-202ENST00000368498 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
GOPC-202ENST00000368498 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
GOPC-202ENST00000368498 SLFN5Q08AF3 891 aa16.15■□□□□ 0.18
GOPC-202ENST00000368498 FAM177A1Q8N128 213 aaPredicted RBP16.15■□□□□ 0.18
GOPC-202ENST00000368498 HDGFP51858 240 aaKnown RBP16.15■□□□□ 0.18
GOPC-202ENST00000368498 FILIP1Q7Z7B0 1213 aa16.15■□□□□ 0.18
GOPC-202ENST00000368498 CHMP4AQ9BY43 222 aa16.15■□□□□ 0.18
GOPC-202ENST00000368498 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.15■□□□□ 0.18
GOPC-202ENST00000368498 RNF20Q5VTR2 975 aa16.15■□□□□ 0.18
GOPC-202ENST00000368498 CIZ1Q9ULV3 898 aaPredicted RBP16.15■□□□□ 0.18
GOPC-202ENST00000368498 SMC2O95347 1197 aa16.14■□□□□ 0.17
GOPC-202ENST00000368498 SURF6O75683 361 aaKnown RBP16.14■□□□□ 0.17
GOPC-202ENST00000368498 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
GOPC-202ENST00000368498 PRKAR2BP31323 418 aa16.13■□□□□ 0.17
GOPC-202ENST00000368498 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
GOPC-202ENST00000368498 IPO7O95373 1038 aaKnown RBP16.12■□□□□ 0.17
GOPC-202ENST00000368498 TEFQ10587 303 aa16.12■□□□□ 0.17
GOPC-202ENST00000368498 PCMTD1Q96MG8 357 aaPredicted RBP16.12■□□□□ 0.17
GOPC-202ENST00000368498 CWC22Q9HCG8 908 aaKnown RBP16.12■□□□□ 0.17
GOPC-202ENST00000368498 GCC1Q96CN9 775 aa16.12■□□□□ 0.17
GOPC-202ENST00000368498 UPF3BQ9BZI7 483 aaKnown RBP16.12■□□□□ 0.17
GOPC-202ENST00000368498 CGNQ9P2M7 1197 aaKnown RBP16.12■□□□□ 0.17
GOPC-202ENST00000368498 MIA2Q96PC5 1412 aa16.12■□□□□ 0.17
GOPC-202ENST00000368498 IGHDP01880 384 aa16.11■□□□□ 0.17
GOPC-202ENST00000368498 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
GOPC-202ENST00000368498 APPP05067 770 aa16.11■□□□□ 0.17
GOPC-202ENST00000368498 CPLX2Q6PUV4 134 aaKnown RBP16.11■□□□□ 0.17
GOPC-202ENST00000368498 WWC1Q8IX03 1113 aa16.11■□□□□ 0.17
GOPC-202ENST00000368498 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
GOPC-202ENST00000368498 MAP4K4O95819 1239 aaPredicted RBP16.11■□□□□ 0.17
GOPC-202ENST00000368498 CCDC192P0DO97 292 aa16.11■□□□□ 0.17
GOPC-202ENST00000368498 TWISTNBQ3B726 338 aaPredicted RBP16.11■□□□□ 0.17
GOPC-202ENST00000368498 SYNE3Q6ZMZ3 975 aa16.11■□□□□ 0.17
GOPC-202ENST00000368498 CLCN1P35523 988 aa16.1■□□□□ 0.17
GOPC-202ENST00000368498 STK3Q13188 491 aa16.1■□□□□ 0.17
GOPC-202ENST00000368498 TMEM57Q8N5G2 664 aa16.1■□□□□ 0.17
GOPC-202ENST00000368498 GDPD2Q9HCC8 539 aa16.1■□□□□ 0.17
GOPC-202ENST00000368498 KINO60870 393 aaKnown RBP16.1■□□□□ 0.17
GOPC-202ENST00000368498 NOM1Q5C9Z4 860 aaKnown RBP16.1■□□□□ 0.17
GOPC-202ENST00000368498 CFTRP13569 1480 aa16.1■□□□□ 0.17
GOPC-202ENST00000368498 ERC2O15083 957 aa16.09■□□□□ 0.17
GOPC-202ENST00000368498 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
GOPC-202ENST00000368498 G3BP1Q13283 466 aaKnown RBP eCLIP16.09■□□□□ 0.17
GOPC-202ENST00000368498 CCDC70Q6NSX1 233 aa16.09■□□□□ 0.17
GOPC-202ENST00000368498 MCM2P49736 904 aa16.09■□□□□ 0.17
GOPC-202ENST00000368498 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
GOPC-202ENST00000368498 NCOA2Q15596 1464 aa16.09■□□□□ 0.17
GOPC-202ENST00000368498 H0YHG0 523 aa16.09■□□□□ 0.17
GOPC-202ENST00000368498 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
GOPC-202ENST00000368498 ATP2B1P20020 1258 aa16.09■□□□□ 0.17
GOPC-202ENST00000368498 UBTFL1P0CB47 393 aaPredicted RBP16.08■□□□□ 0.17
GOPC-202ENST00000368498 FERMT3Q86UX7 667 aa16.08■□□□□ 0.17
GOPC-202ENST00000368498 TNMDQ9H2S6 317 aa16.08■□□□□ 0.16
GOPC-202ENST00000368498 TRIM29Q14134 588 aa16.08■□□□□ 0.16
GOPC-202ENST00000368498 WDR33Q9C0J8 1336 aaKnown RBP16.07■□□□□ 0.16
GOPC-202ENST00000368498 ROCK1Q13464 1354 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms