RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.41■□□□□ 0.067e-8■■■■■ 186.3
GOPC-202ENST00000368498 SF3B1O75533 1304 aaKnown RBP eCLIP13.33□□□□□ -0.288e-6■■■■■ 107
GOPC-202ENST00000368498 FUBP3Q96I24 572 aaKnown RBP eCLIP12.88□□□□□ -0.351e-23■■■■■ 55.1
GOPC-202ENST00000368498 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.63□□□□□ -0.554e-7■■■■■ 54.4
GOPC-202ENST00000368498 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.47□□□□□ -0.251e-11■■■■■ 38.7
GOPC-202ENST00000368498 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.386e-9■■■■□ 25.4
GOPC-202ENST00000368498 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.466e-6■■■■□ 25.1
GOPC-202ENST00000368498 U2AF1Q01081 240 aaKnown RBP eCLIP16.94■□□□□ 0.37e-7■■■■□ 25
GOPC-202ENST00000368498 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■■■□ 24.9
GOPC-202ENST00000368498 CSTF2P33240 577 aaKnown RBP eCLIP13.2□□□□□ -0.39e-8■■■■□ 22
GOPC-202ENST00000368498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.434e-8■■■■□ 21.9
GOPC-202ENST00000368498 PTBP1P26599 531 aaKnown RBP eCLIP12.39□□□□□ -0.433e-7■■■■□ 20.2
GOPC-202ENST00000368498 HLTFQ14527 1009 aaKnown RBP eCLIP15.54■□□□□ 0.081e-6■■■■□ 20
GOPC-202ENST00000368498 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.112e-7■■■■□ 20
GOPC-202ENST00000368498 U2AF2P26368 475 aaKnown RBP eCLIP15.69■□□□□ 0.19e-7■■■□□ 18.6
GOPC-202ENST00000368498 TIA1P31483 386 aaKnown RBP eCLIP12.84□□□□□ -0.357e-6■■■□□ 17.1
GOPC-202ENST00000368498 ZNF622Q969S3 477 aaKnown RBP eCLIP14.77□□□□□ -0.044e-6■■■□□ 17
GOPC-202ENST00000368498 RPS3P23396 243 aaKnown RBP eCLIP13.19□□□□□ -0.34e-8■■■□□ 16.5
GOPC-202ENST00000368498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.17□□□□□ -0.141e-9■■■□□ 16.2
GOPC-202ENST00000368498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.136e-8■■■□□ 16
GOPC-202ENST00000368498 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.46□□□□□ -0.12e-7■■□□□ 14.2
GOPC-202ENST00000368498 RBM15Q96T37 977 aaKnown RBP eCLIP14.31□□□□□ -0.129e-7■■□□□ 13.3
GOPC-202ENST00000368498 DDX3XO00571 662 aaKnown RBP eCLIP14.02□□□□□ -0.175e-9■■□□□ 12.9
GOPC-202ENST00000368498 PPIGQ13427 754 aaKnown RBP eCLIP12.98□□□□□ -0.333e-7■■□□□ 11.4
GOPC-202ENST00000368498 EIF3HO15372 352 aaKnown RBP eCLIP14.56□□□□□ -0.083e-7■□□□□ 10.4
GOPC-202ENST00000368498 SRSF9Q13242 221 aaKnown RBP eCLIP11.56□□□□□ -0.562e-7■□□□□ 10
GOPC-202ENST00000368498 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■□□□□ 9.1
GOPC-202ENST00000368498 EIF3DO15371 548 aaKnown RBP eCLIP13.94□□□□□ -0.182e-9■□□□□ 8.9
GOPC-202ENST00000368498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.32□□□□□ -0.122e-13■□□□□ 8.4
Retrieved 29 of 29 RNA–protein pairs in 8.7 ms