RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 ZNF142P52746 1687 aaPredicted RBP15.08■□□□□ 0.01
ABCD4-201ENST00000356924 AMER1Q5JTC6 1135 aaPredicted RBP15.08■□□□□ 0
ABCD4-201ENST00000356924 CC2D1BQ5T0F9 858 aaKnown RBP15.08■□□□□ 0
ABCD4-201ENST00000356924 TXNDC2Q86VQ3 553 aa15.08■□□□□ 0
ABCD4-201ENST00000356924 PLEKHH1Q9ULM0 1364 aa15.07■□□□□ 0
ABCD4-201ENST00000356924 TECPR2O15040 1411 aa15.07■□□□□ 0
ABCD4-201ENST00000356924 CPS1P31327 1500 aa15.07■□□□□ 0
ABCD4-201ENST00000356924 CARD14Q9BXL6 1004 aa15.06■□□□□ 0
ABCD4-201ENST00000356924 POGKQ9P215 609 aa15.06■□□□□ 0
ABCD4-201ENST00000356924 KNSTRNQ9Y448 316 aa15.06■□□□□ 0
ABCD4-201ENST00000356924 THEMISQ8N1K5 641 aaPredicted RBP15.06■□□□□ 0
ABCD4-201ENST00000356924 BRD4O60885 1362 aaPredicted RBP15.06■□□□□ 0
ABCD4-201ENST00000356924 MINK1Q8N4C8 1332 aaPredicted RBP15.06■□□□□ 0
ABCD4-201ENST00000356924 NPC1L1Q9UHC9 1359 aa15.05■□□□□ 0
ABCD4-201ENST00000356924 WAPLQ7Z5K2 1190 aa15.05■□□□□ -0
ABCD4-201ENST00000356924 SLC12A5Q9H2X9 1139 aa15.05■□□□□ -0
ABCD4-201ENST00000356924 CABP2Q9NPB3 220 aa15.05■□□□□ -0
ABCD4-201ENST00000356924 EID1Q9Y6B2 187 aa15.05■□□□□ -0
ABCD4-201ENST00000356924 FAM9BQ8IZU0 186 aa15.04■□□□□ -0
ABCD4-201ENST00000356924 SIRT1Q96EB6 747 aa15.03■□□□□ -0
ABCD4-201ENST00000356924 FAM135BQ49AJ0 1406 aa15.03■□□□□ -0
ABCD4-201ENST00000356924 USP32Q8NFA0 1604 aa15.02■□□□□ -0
ABCD4-201ENST00000356924 TMC1Q8TDI8 760 aa15.02■□□□□ -0
ABCD4-201ENST00000356924 PTPRUQ92729 1446 aa15.02■□□□□ -0
ABCD4-201ENST00000356924 NLRP13Q86W25 1043 aa15.02□□□□□ -0.01
ABCD4-201ENST00000356924 PNISRQ8TF01 805 aaKnown RBP15.02□□□□□ -0.01
ABCD4-201ENST00000356924 DIP2AQ14689 1571 aa15.02□□□□□ -0.01
ABCD4-201ENST00000356924 SETD1BQ9UPS6 1966 aaKnown RBP15.01□□□□□ -0.01
ABCD4-201ENST00000356924 NSD3Q9BZ95 1437 aa15.01□□□□□ -0.01
ABCD4-201ENST00000356924 CDK19Q9BWU1 502 aa15.01□□□□□ -0.01
ABCD4-201ENST00000356924 ANKRD36BQ8N2N9 1353 aa15□□□□□ -0.01
ABCD4-201ENST00000356924 SRPK2P78362 688 aaKnown RBP15□□□□□ -0.01
ABCD4-201ENST00000356924 HNRNPUQ00839 825 aaKnown RBP eCLIP15□□□□□ -0.01
ABCD4-201ENST00000356924 ATAD2Q6PL18 1390 aa15□□□□□ -0.01
ABCD4-201ENST00000356924 ROBO2Q9HCK4 1378 aa15□□□□□ -0.01
ABCD4-201ENST00000356924 NINLQ9Y2I6 1382 aa14.99□□□□□ -0.01
ABCD4-201ENST00000356924 SLC26A8Q96RN1 970 aa14.99□□□□□ -0.01
ABCD4-201ENST00000356924 TBX22Q9Y458 520 aa14.99□□□□□ -0.01
ABCD4-201ENST00000356924 CD163L1Q9NR16 1453 aa14.99□□□□□ -0.01
ABCD4-201ENST00000356924 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.98□□□□□ -0.01
ABCD4-201ENST00000356924 PPP2R1AP30153 589 aa14.98□□□□□ -0.01
ABCD4-201ENST00000356924 PRKCSHP14314 528 aaPredicted RBP14.97□□□□□ -0.01
ABCD4-201ENST00000356924 XRN1Q8IZH2 1706 aaKnown RBP14.97□□□□□ -0.01
ABCD4-201ENST00000356924 ADGRB2O60241 1585 aa14.97□□□□□ -0.01
ABCD4-201ENST00000356924 RBM19Q9Y4C8 960 aaKnown RBP14.96□□□□□ -0.01
ABCD4-201ENST00000356924 A0A1W2PP64 1363 aa14.96□□□□□ -0.02
ABCD4-201ENST00000356924 WASLO00401 505 aaPredicted RBP14.95□□□□□ -0.02
ABCD4-201ENST00000356924 PTCH1Q13635 1447 aa14.93□□□□□ -0.02
ABCD4-201ENST00000356924 AMOTL2Q9Y2J4 779 aa14.93□□□□□ -0.02
ABCD4-201ENST00000356924 ANKLE2Q86XL3 938 aa14.92□□□□□ -0.02
ABCD4-201ENST00000356924 ATP7BP35670 1465 aa14.91□□□□□ -0.02
ABCD4-201ENST00000356924 FKBP8Q14318 412 aa14.91□□□□□ -0.02
ABCD4-201ENST00000356924 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
ABCD4-201ENST00000356924 ANKRD26Q9UPS8 1709 aa14.91□□□□□ -0.02
ABCD4-201ENST00000356924 CGNL1Q0VF96 1302 aa14.91□□□□□ -0.02
ABCD4-201ENST00000356924 ZBED9Q6R2W3 1325 aa14.91□□□□□ -0.02
ABCD4-201ENST00000356924 CHD2O14647 1828 aaKnown RBP14.91□□□□□ -0.02
ABCD4-201ENST00000356924 PIK3R4Q99570 1358 aa14.91□□□□□ -0.02
ABCD4-201ENST00000356924 TERF2IPQ9NYB0 399 aa14.9□□□□□ -0.02
ABCD4-201ENST00000356924 NSD2O96028 1365 aa14.9□□□□□ -0.02
ABCD4-201ENST00000356924 TOPAZ1Q8N9V7 1692 aa14.9□□□□□ -0.02
ABCD4-201ENST00000356924 KIF20BQ96Q89 1820 aa14.89□□□□□ -0.03
ABCD4-201ENST00000356924 INSRP06213 1382 aa14.89□□□□□ -0.03
ABCD4-201ENST00000356924 PPIP5K1Q6PFW1 1433 aa14.88□□□□□ -0.03
ABCD4-201ENST00000356924 PRR36Q9H6K5 1346 aa14.88□□□□□ -0.03
ABCD4-201ENST00000356924 AKAP12Q02952 1782 aa14.88□□□□□ -0.03
ABCD4-201ENST00000356924 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
ABCD4-201ENST00000356924 CDC42BPGQ6DT37 1551 aa14.88□□□□□ -0.03
ABCD4-201ENST00000356924 HDGFL2Q7Z4V5 671 aaPredicted RBP14.88□□□□□ -0.03
ABCD4-201ENST00000356924 MORC1Q86VD1 984 aa14.88□□□□□ -0.03
ABCD4-201ENST00000356924 CPSF1Q10570 1443 aaKnown RBP14.88□□□□□ -0.03
ABCD4-201ENST00000356924 BLMP54132 1417 aaPredicted RBP14.87□□□□□ -0.03
ABCD4-201ENST00000356924 MON2Q7Z3U7 1717 aa14.87□□□□□ -0.03
ABCD4-201ENST00000356924 NPHP4O75161 1426 aaPredicted RBP14.87□□□□□ -0.03
ABCD4-201ENST00000356924 NCKAP5LQ9HCH0 1330 aa14.86□□□□□ -0.03
ABCD4-201ENST00000356924 ITSN1Q15811 1721 aa14.86□□□□□ -0.03
ABCD4-201ENST00000356924 NEFLP07196 543 aa14.86□□□□□ -0.03
ABCD4-201ENST00000356924 KCNA6P17658 529 aa14.86□□□□□ -0.03
ABCD4-201ENST00000356924 FYB1O15117 783 aa14.84□□□□□ -0.03
ABCD4-201ENST00000356924 CCDC61Q9Y6R9 512 aa14.84□□□□□ -0.03
ABCD4-201ENST00000356924 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
ABCD4-201ENST00000356924 POLR3AO14802 1390 aaPredicted RBP14.84□□□□□ -0.03
ABCD4-201ENST00000356924 GGNBP2Q9H3C7 697 aa14.83□□□□□ -0.04
ABCD4-201ENST00000356924 ADAMTS8Q9UP79 889 aa14.83□□□□□ -0.04
ABCD4-201ENST00000356924 TNNT2P45379 298 aaPredicted RBP14.82□□□□□ -0.04
ABCD4-201ENST00000356924 EDC4Q6P2E9 1401 aaKnown RBP14.82□□□□□ -0.04
ABCD4-201ENST00000356924 RGPD8O14715 1765 aaPredicted RBP14.82□□□□□ -0.04
ABCD4-201ENST00000356924 SENP3-EIF4A1A0A087X0R7 540 aa14.82□□□□□ -0.04
ABCD4-201ENST00000356924 NKTRP30414 1462 aaKnown RBP14.82□□□□□ -0.04
ABCD4-201ENST00000356924 NALCNQ8IZF0 1738 aa14.82□□□□□ -0.04
ABCD4-201ENST00000356924 ERICH6Q7L0X2 663 aa14.82□□□□□ -0.04
ABCD4-201ENST00000356924 NRKQ7Z2Y5 1582 aa14.82□□□□□ -0.04
ABCD4-201ENST00000356924 FMN2Q9NZ56 1722 aa14.81□□□□□ -0.04
ABCD4-201ENST00000356924 KDM4FA0A1W2PPD8 638 aa14.81□□□□□ -0.04
ABCD4-201ENST00000356924 NWD1Q149M9 1564 aa14.8□□□□□ -0.04
ABCD4-201ENST00000356924 PLEKHG3A1L390 1219 aa14.8□□□□□ -0.04
ABCD4-201ENST00000356924 WDR43Q15061 677 aaKnown RBP eCLIP14.8□□□□□ -0.04
ABCD4-201ENST00000356924 MTHFSP49914 203 aa14.79□□□□□ -0.04
ABCD4-201ENST00000356924 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.79□□□□□ -0.04
ABCD4-201ENST00000356924 NUTM2FA1L443 756 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms