RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SCAF11Q99590 1463 aaKnown RBP5.9□□□□□ -1.47
CNOT4-202ENST00000356162 POTEFA5A3E0 1075 aa5.9□□□□□ -1.47
CNOT4-202ENST00000356162 PKD2Q13563 968 aa5.9□□□□□ -1.47
CNOT4-202ENST00000356162 IER5LQ5T953 404 aa5.9□□□□□ -1.47
CNOT4-202ENST00000356162 THEMISQ8N1K5 641 aaPredicted RBP5.89□□□□□ -1.47
CNOT4-202ENST00000356162 ZFYVE9O95405 1425 aa5.88□□□□□ -1.47
CNOT4-202ENST00000356162 TRIM26Q12899 539 aaPredicted RBP5.88□□□□□ -1.47
CNOT4-202ENST00000356162 TMEM2Q9UHN6 1383 aa5.88□□□□□ -1.47
CNOT4-202ENST00000356162 DIP2AQ14689 1571 aa5.88□□□□□ -1.47
CNOT4-202ENST00000356162 NPHP4O75161 1426 aaPredicted RBP5.88□□□□□ -1.47
CNOT4-202ENST00000356162 IFT172Q9UG01 1749 aa5.88□□□□□ -1.47
CNOT4-202ENST00000356162 IDI1Q13907 227 aa5.88□□□□□ -1.47
CNOT4-202ENST00000356162 COLQQ9Y215 455 aaPredicted RBP5.88□□□□□ -1.47
CNOT4-202ENST00000356162 PPLO60437 1756 aa5.88□□□□□ -1.47
CNOT4-202ENST00000356162 NEXMIFQ5QGS0 1516 aa5.87□□□□□ -1.47
CNOT4-202ENST00000356162 POTEJP0CG39 1038 aa5.87□□□□□ -1.47
CNOT4-202ENST00000356162 OTUD5Q96G74 571 aa5.87□□□□□ -1.47
CNOT4-202ENST00000356162 MPHOSPH9Q99550 1183 aa5.87□□□□□ -1.47
CNOT4-202ENST00000356162 RIMS2Q9UQ26 1411 aa5.87□□□□□ -1.47
CNOT4-202ENST00000356162 SLC24A1O60721 1099 aa5.87□□□□□ -1.47
CNOT4-202ENST00000356162 PSEN1P49768 467 aa5.87□□□□□ -1.47
CNOT4-202ENST00000356162 CCDC144AA2RUR9 1427 aa5.87□□□□□ -1.47
CNOT4-202ENST00000356162 ANKLE2Q86XL3 938 aa5.86□□□□□ -1.47
CNOT4-202ENST00000356162 PDAP1Q13442 181 aaKnown RBP5.86□□□□□ -1.47
CNOT4-202ENST00000356162 NWD1Q149M9 1564 aa5.86□□□□□ -1.47
CNOT4-202ENST00000356162 SETBP1Q9Y6X0 1596 aa5.86□□□□□ -1.47
CNOT4-202ENST00000356162 NCKAP5LQ9HCH0 1330 aa5.86□□□□□ -1.47
CNOT4-202ENST00000356162 PLEKHG1Q9ULL1 1385 aa5.85□□□□□ -1.47
CNOT4-202ENST00000356162 SEC24BO95487 1268 aa5.85□□□□□ -1.47
CNOT4-202ENST00000356162 NRXN3Q9Y4C0 1643 aa5.85□□□□□ -1.47
CNOT4-202ENST00000356162 SPATA31E1Q6ZUB1 1445 aa5.85□□□□□ -1.47
CNOT4-202ENST00000356162 EID1Q9Y6B2 187 aa5.85□□□□□ -1.47
CNOT4-202ENST00000356162 LTBP4Q8N2S1 1624 aa5.85□□□□□ -1.47
CNOT4-202ENST00000356162 CPS1P31327 1500 aa5.85□□□□□ -1.47
CNOT4-202ENST00000356162 ANKRD30BQ9BXX2 1392 aa5.84□□□□□ -1.47
CNOT4-202ENST00000356162 IRX5P78411 483 aaPredicted RBP5.84□□□□□ -1.47
CNOT4-202ENST00000356162 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.84□□□□□ -1.47
CNOT4-202ENST00000356162 IQSEC2Q5JU85 1478 aa5.84□□□□□ -1.47
CNOT4-202ENST00000356162 MYOM2P54296 1465 aa5.84□□□□□ -1.47
CNOT4-202ENST00000356162 SETD1AO15047 1707 aaKnown RBP5.84□□□□□ -1.47
CNOT4-202ENST00000356162 CHGAP10645 457 aaKnown RBP5.83□□□□□ -1.48
CNOT4-202ENST00000356162 HDGFP51858 240 aaKnown RBP5.83□□□□□ -1.48
CNOT4-202ENST00000356162 TXNDC2Q86VQ3 553 aa5.83□□□□□ -1.48
CNOT4-202ENST00000356162 RPGRIP1LQ68CZ1 1315 aa5.83□□□□□ -1.48
CNOT4-202ENST00000356162 LAMC1P11047 1609 aa5.83□□□□□ -1.48
CNOT4-202ENST00000356162 STRCP1A6NGW2 1772 aa5.83□□□□□ -1.48
CNOT4-202ENST00000356162 LTKP29376 864 aa5.83□□□□□ -1.48
CNOT4-202ENST00000356162 RNF25Q96BH1 459 aaPredicted RBP5.83□□□□□ -1.48
CNOT4-202ENST00000356162 NKTRP30414 1462 aaKnown RBP5.83□□□□□ -1.48
CNOT4-202ENST00000356162 MAMSTRQ6ZN01 415 aa5.82□□□□□ -1.48
CNOT4-202ENST00000356162 RTN4Q9NQC3 1192 aaKnown RBP5.82□□□□□ -1.48
CNOT4-202ENST00000356162 XRN1Q8IZH2 1706 aaKnown RBP5.82□□□□□ -1.48
CNOT4-202ENST00000356162 CHD2O14647 1828 aaKnown RBP5.82□□□□□ -1.48
CNOT4-202ENST00000356162 DHX57Q6P158 1386 aaKnown RBP5.82□□□□□ -1.48
CNOT4-202ENST00000356162 ADAMTS13Q76LX8 1427 aa5.82□□□□□ -1.48
CNOT4-202ENST00000356162 PPP1R15AO75807 674 aaPredicted RBP5.82□□□□□ -1.48
CNOT4-202ENST00000356162 PLCG2P16885 1265 aa5.82□□□□□ -1.48
CNOT4-202ENST00000356162 RIOK3O14730 519 aaKnown RBP5.81□□□□□ -1.48
CNOT4-202ENST00000356162 ZNF326Q5BKZ1 582 aaKnown RBP5.81□□□□□ -1.48
CNOT4-202ENST00000356162 OCEL1Q9H607 264 aa5.81□□□□□ -1.48
CNOT4-202ENST00000356162 PIK3R4Q99570 1358 aa5.81□□□□□ -1.48
CNOT4-202ENST00000356162 NRXN1Q9ULB1 1477 aa5.81□□□□□ -1.48
CNOT4-202ENST00000356162 KNDC1Q76NI1 1749 aa5.81□□□□□ -1.48
CNOT4-202ENST00000356162 ALKQ9UM73 1620 aa5.8□□□□□ -1.48
CNOT4-202ENST00000356162 PRAG1Q86YV5 1406 aa5.8□□□□□ -1.48
CNOT4-202ENST00000356162 GOLGA2Q08379 1002 aa5.8□□□□□ -1.48
CNOT4-202ENST00000356162 PIK3C2GO75747 1445 aa5.8□□□□□ -1.48
CNOT4-202ENST00000356162 ZNF335Q9H4Z2 1342 aaPredicted RBP5.8□□□□□ -1.48
CNOT4-202ENST00000356162 MKRN3Q13064 507 aaKnown RBP5.8□□□□□ -1.48
CNOT4-202ENST00000356162 SCUBE2Q9NQ36 999 aa5.8□□□□□ -1.48
CNOT4-202ENST00000356162 XIRP1Q702N8 1843 aaKnown RBP5.79□□□□□ -1.48
CNOT4-202ENST00000356162 KIAA1210Q9ULL0 1709 aa5.79□□□□□ -1.48
CNOT4-202ENST00000356162 VGFO15240 615 aaPredicted RBP5.79□□□□□ -1.48
CNOT4-202ENST00000356162 CABP2Q9NPB3 220 aa5.79□□□□□ -1.48
CNOT4-202ENST00000356162 TBX22Q9Y458 520 aa5.79□□□□□ -1.48
CNOT4-202ENST00000356162 ASXL1Q8IXJ9 1541 aa5.79□□□□□ -1.48
CNOT4-202ENST00000356162 LRRC7Q96NW7 1537 aa5.79□□□□□ -1.48
CNOT4-202ENST00000356162 PDCD7Q8N8D1 485 aaKnown RBP5.78□□□□□ -1.48
CNOT4-202ENST00000356162 ILDR1Q86SU0 546 aaPredicted RBP5.78□□□□□ -1.48
CNOT4-202ENST00000356162 PTCH1Q13635 1447 aa5.78□□□□□ -1.48
CNOT4-202ENST00000356162 ECM2O94769 699 aaPredicted RBP5.77□□□□□ -1.49
CNOT4-202ENST00000356162 KCNA6P17658 529 aa5.77□□□□□ -1.49
CNOT4-202ENST00000356162 NUTM2DQ5VT03 806 aaPredicted RBP5.77□□□□□ -1.49
CNOT4-202ENST00000356162 CERKQ8TCT0 537 aa5.77□□□□□ -1.49
CNOT4-202ENST00000356162 BCANQ96GW7 911 aa5.77□□□□□ -1.49
CNOT4-202ENST00000356162 STAC3Q96MF2 364 aa5.77□□□□□ -1.49
CNOT4-202ENST00000356162 PTPRUQ92729 1446 aa5.77□□□□□ -1.49
CNOT4-202ENST00000356162 SLC26A8Q96RN1 970 aa5.77□□□□□ -1.49
CNOT4-202ENST00000356162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.77□□□□□ -1.492e-9■■■■■ 42.8
CNOT4-202ENST00000356162 NCOA3Q9Y6Q9 1424 aa5.77□□□□□ -1.49
CNOT4-202ENST00000356162 TECPR2O15040 1411 aa5.76□□□□□ -1.49
CNOT4-202ENST00000356162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.76□□□□□ -1.49
CNOT4-202ENST00000356162 RGL3Q3MIN7 710 aa5.76□□□□□ -1.49
CNOT4-202ENST00000356162 ZFP91Q96JP5 570 aaPredicted RBP5.76□□□□□ -1.49
CNOT4-202ENST00000356162 ADGRF5Q8IZF2 1346 aa5.76□□□□□ -1.49
CNOT4-202ENST00000356162 PCGF6Q9BYE7 350 aa5.76□□□□□ -1.49
CNOT4-202ENST00000356162 DLC1Q96QB1 1528 aa5.76□□□□□ -1.49
CNOT4-202ENST00000356162 METP08581 1390 aa5.76□□□□□ -1.49
CNOT4-202ENST00000356162 NALCNQ8IZF0 1738 aa5.76□□□□□ -1.49
CNOT4-202ENST00000356162 ADGRB1O14514 1584 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms